Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 2.2e-79 298.9 153 100.0
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 2.6e-51 205.7 153 75.8
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 1.5e-46 189.9 149 71.8
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 6.8e-44 181.0 154 66.2
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 1.2e-43 180.3 160 66.2
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 2.0e-40 169.5 159 61.0
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 5.0e-39 164.9 162 58.6
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 5.0e-39 164.9 154 63.0
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 5.2e-36 154.8 154 59.7
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 5.2e-28 128.3 137 50.4
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 6.0e-24 114.8 116 54.3
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 8.1e-21 104.4 135 43.0
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 4.4e-19 98.6 134 40.3
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 5.8e-19 98.2 133 45.1
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.2e-16 90.5 119 49.6
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 2.1e-16 89.7 128 43.8
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 2.1e-16 89.7 131 44.3
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 3.5e-16 89.0 128 39.8
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.0e-16 88.2 123 42.3
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 6.0e-16 88.2 141 40.4
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 7.8e-16 87.8 141 40.4
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.0e-15 87.4 157 38.9
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 3.0e-15 85.9 116 47.4
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 3.9e-15 85.5 133 40.6
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 3.9e-15 85.5 120 41.7
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 6.6e-15 84.7 137 38.7
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 8.6e-15 84.3 129 41.1
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 8.6e-15 84.3 118 44.9
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.5e-14 83.6 120 40.8
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 1.9e-14 83.2 114 40.4
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.5e-14 82.8 126 45.2
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 5.6e-14 81.6 113 43.4
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 5.6e-14 81.6 133 38.3
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 7.3e-14 81.3 115 43.5
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 2.1e-13 79.7 121 42.1
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 2.8e-13 79.3 122 41.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.6e-13 79.0 115 42.6
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.7e-13 78.6 115 42.6
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 4.7e-13 78.6 135 37.0
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 1.1e-12 77.4 131 40.5
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.4e-12 77.0 141 36.9
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 1.8e-12 76.6 141 36.9
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 2.3e-12 76.3 114 40.4
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 8.9e-12 74.3 130 40.8
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.5e-11 73.6 126 34.1
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.5e-11 73.6 123 36.6
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.5e-11 73.6 135 36.3
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.0e-11 73.2 131 38.2
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.4e-11 72.4 112 40.2
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.4e-11 72.0 146 36.3
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 4.4e-11 72.0 118 38.1
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 5.8e-11 71.6 162 33.3
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 5.8e-11 71.6 126 36.5
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 7.6e-11 71.2 143 37.1
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 9.9e-11 70.9 158 35.4
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.3e-10 70.5 122 35.2
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 1.7e-10 70.1 160 35.0
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 1.7e-10 70.1 127 37.0
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 2.9e-10 69.3 123 36.6
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.8e-10 68.9 116 38.8
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 4.9e-10 68.6 130 36.2
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.9e-10 68.6 135 35.6
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.4e-10 68.2 148 33.8
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.4e-10 68.2 137 37.2
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 8.4e-10 67.8 105 38.1
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 8.4e-10 67.8 125 32.8
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 1.1e-09 67.4 129 35.7
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 1.1e-09 67.4 123 38.2
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.9e-09 66.6 128 34.4
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.9e-09 66.6 119 38.7
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 1.9e-09 66.6 141 34.0
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 3.2e-09 65.9 127 39.4
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 3.2e-09 65.9 136 34.6
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 4.1e-09 65.5 131 35.1
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 4.1e-09 65.5 131 35.1
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 4.1e-09 65.5 131 35.1
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 4.1e-09 65.5 131 33.6
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 5.4e-09 65.1 147 34.7
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 9.2e-09 64.3 123 35.0
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 9.2e-09 64.3 131 35.1
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 1.2e-08 63.9 130 39.2
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 1.6e-08 63.5 130 35.4
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.1e-08 63.2 128 34.4
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 2.1e-08 63.2 132 34.1
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 2.1e-08 63.2 122 35.2
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 2.7e-08 62.8 128 33.6
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 2.7e-08 62.8 100 44.0
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 3.5e-08 62.4 114 33.3
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 3.5e-08 62.4 151 30.5
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.5e-08 62.4 98 39.8
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 6.0e-08 61.6 104 37.5
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 6.0e-08 61.6 121 35.5
BcaB07g32663 Brassica carinata HOM05D012212 ORTHO05D006213 7.8e-08 61.2 144 34.0
A09p35930 Brassica napus HOM05D012212 ORTHO05D006213 7.8e-08 61.2 127 37.8
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 7.8e-08 61.2 111 42.3
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 1.3e-07 60.5 130 33.1
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 1.7e-07 60.1 128 32.0
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 1.7e-07 60.1 131 35.1
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 2.3e-07 59.7 141 31.9
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 2.3e-07 59.7 133 34.6
BraA09t39118Z Brassica rapa HOM05D012212 ORTHO05D006213 3.9e-07 58.9 131 37.4
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 5.1e-07 58.5 105 33.3
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 5.1e-07 58.5 111 33.3
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 5.1e-07 58.5 129 32.6
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 5.1e-07 58.5 120 34.2
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 8.6e-07 57.8 121 35.5
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.1e-06 57.4 123 36.6
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.5e-06 56.2 136 35.3
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 3.3e-06 55.8 125 33.6
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 3.3e-06 55.8 112 38.4
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 3.3e-06 55.8 112 38.4
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 3.3e-06 55.8 112 38.4
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 4.3e-06 55.5 126 33.3
Cpa.g.sc166.34 Carica papaya HOM05D005932 ORTHO05D006213 9.6e-06 54.3 100 37.0
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 9.6e-06 54.3 118 33.9
THA.LOC104798624 Tarenaya hassleriana HOM05D012212 ORTHO05D006213 9.6e-06 54.3 136 32.4


User provided reference genes

Program Settings