Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 2.8e-166 588.6 299 100.0
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 1.1e-149 533.5 297 90.2
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 1.5e-148 529.6 299 89.6
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 1.3e-131 473.4 299 77.3
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 4.1e-130 468.4 299 78.9
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 2.7e-129 465.7 299 76.3
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.5e-129 465.3 299 77.3
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 3.5e-129 465.3 296 79.4
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 7.8e-129 464.2 284 82.0
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 1.0e-128 463.8 299 76.6
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 3.0e-128 462.2 299 76.9
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 1.5e-127 459.9 299 76.6
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 7.3e-127 457.6 299 74.9
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 7.3e-127 457.6 299 75.6
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 1.2e-126 456.8 299 78.3
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.1e-126 456.1 299 76.6
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.1e-126 456.1 299 75.9
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.1e-126 456.1 299 75.9
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 2.8e-126 455.7 299 75.6
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 3.6e-126 455.3 299 76.3
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 4.7e-126 454.9 299 75.6
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 6.2e-126 454.5 299 75.9
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 8.1e-126 454.1 299 75.9
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.1e-125 452.2 299 74.9
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.9e-125 451.1 299 74.9
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 4.4e-124 448.4 299 73.9
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 5.8e-124 448.0 299 76.9
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 7.6e-124 447.6 296 74.3
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 9.9e-124 447.2 299 73.6
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 9.9e-124 447.2 299 75.3
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 9.9e-124 447.2 307 74.6
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 2.2e-123 446.0 299 74.9
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 2.2e-123 446.0 304 75.0
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 2.2e-123 446.0 299 74.9
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 2.9e-123 445.7 299 74.9
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 4.9e-123 444.9 299 74.6
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 4.9e-123 444.9 307 74.3
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 8.4e-123 444.1 294 74.1
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 1.1e-122 443.7 299 75.3
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.4e-122 443.4 299 73.9
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.4e-122 442.6 299 72.9
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 2.4e-122 442.6 299 72.6
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 4.2e-122 441.8 296 73.3
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 5.4e-122 441.4 297 74.4
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 5.4e-122 441.4 299 73.9
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 5.4e-122 441.4 299 72.9
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 9.3e-122 440.7 299 74.2
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 1.6e-121 439.9 301 74.1
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.1e-121 439.5 299 72.6
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 2.7e-121 439.1 299 73.2
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 2.7e-121 439.1 299 74.6
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 3.5e-121 438.7 297 73.4
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 3.5e-121 438.7 297 73.4
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 7.8e-121 437.6 297 74.1
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 1.0e-120 437.2 299 75.3
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 6.6e-120 434.5 299 73.2
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 6.6e-120 434.5 343 66.5
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 8.7e-120 434.1 299 72.9
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.1e-119 433.7 317 69.1
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 1.1e-119 433.7 296 72.3
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.5e-119 433.3 317 68.8
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.5e-119 433.3 296 72.0
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.5e-119 433.3 296 72.0
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 1.9e-119 433.0 299 72.2
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 1.9e-119 433.0 299 70.6
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 5.6e-119 431.4 299 72.6
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 7.3e-119 431.0 299 73.2
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 9.6e-119 430.6 299 72.9
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 1.3e-118 430.3 299 72.9
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.6e-118 429.9 299 71.9
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 2.1e-118 429.5 299 72.6
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 2.8e-118 429.1 299 73.2
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.4e-117 426.8 285 74.4
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 4.0e-117 425.2 317 67.5
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 9.0e-117 424.1 299 71.2
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 9.0e-117 424.1 297 71.4
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 3.4e-116 422.2 299 72.2
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 4.5e-116 421.8 296 70.9
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 4.5e-116 421.8 296 70.9
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 1.3e-115 420.2 296 69.6
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 6.4e-115 417.9 299 69.9
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 8.4e-115 417.5 297 69.4
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 8.4e-115 417.5 299 71.2
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.1e-114 417.2 295 71.5
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 1.4e-114 416.8 299 71.6
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 1.9e-114 416.4 290 71.0
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 9.3e-114 414.1 278 74.5
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 2.1e-113 412.9 299 68.9
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 1.3e-112 410.2 282 72.7
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 1.3e-112 410.2 299 68.6
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.3e-112 410.2 274 73.7
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 3.0e-112 409.1 297 68.7
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.1e-111 407.1 297 68.0
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 3.3e-111 405.6 297 68.4
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 3.3e-111 405.6 297 68.4
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 3.3e-111 405.6 297 68.0
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 3.3e-111 405.6 262 76.7
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 5.6e-111 404.8 297 67.3
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 5.6e-111 404.8 297 67.0
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 7.4e-111 404.4 297 67.3
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 1.3e-110 403.7 297 67.3
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 3.7e-110 402.1 297 67.7
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 4.8e-110 401.7 299 67.6
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 4.0e-109 398.7 250 76.8
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 5.3e-109 398.3 297 67.3
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.4e-106 390.2 299 65.9
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 1.5e-103 380.2 297 65.3
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.5e-103 380.2 322 62.4
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 2.2e-99 366.3 299 64.5
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 2.5e-95 352.8 299 64.5
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.6e-94 350.1 222 77.9
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.7e-94 349.0 274 67.2
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 4.8e-94 348.6 299 61.5
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 3.2e-90 335.9 225 75.1
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 1.6e-89 333.6 225 75.1
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 5.1e-88 328.6 289 53.3
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 9.7e-87 324.3 222 71.6
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 6.3e-86 321.6 296 53.7
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 5.9e-84 315.1 291 54.0
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.3e-83 313.9 289 54.7
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 8.5e-83 311.2 225 71.1
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 2.5e-82 309.7 300 53.3
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 2.5e-82 309.7 294 53.7
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.0e-80 304.3 306 54.6
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 1.5e-79 300.4 264 54.9
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.4e-77 293.1 237 65.4
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 2.9e-75 286.2 220 63.6
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 4.8e-70 268.9 179 76.0
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 9.1e-69 264.6 258 52.7
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 2.9e-67 259.6 179 72.1
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 2.2e-59 233.4 150 76.7
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.6e-57 227.3 205 60.5
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 1.7e-54 217.2 151 70.9
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 2.7e-52 209.9 162 59.9
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.9e-51 206.5 136 75.0
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 1.9e-50 203.8 143 65.0
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 9.2e-45 184.9 129 73.6
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 6.1e-41 172.2 264 35.6
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 2.9e-38 163.3 184 50.5
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 2.0e-36 157.1 108 72.2
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 2.5e-34 150.2 105 73.3
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.5e-31 141.0 301 32.6
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.9e-29 134.0 109 64.2
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.7e-28 130.2 99 59.6
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 3.0e-27 126.7 116 61.2
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 2.0e-23 114.0 266 27.1
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 7.1e-21 105.5 126 49.2
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 9.2e-21 105.1 83 60.2
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 4.3e-18 96.3 97 57.7
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 9.5e-18 95.1 65 69.2
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 1.1e-16 91.7 97 55.7
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 3.0e-11 73.6 92 45.7
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 7.3e-10 68.9 45 73.3
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 1.2e-07 61.6 60 53.3
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 9.9e-07 58.5 55 52.7
VMungo0251G3417 Vigna mungo HOM05D004415 ORTHO05D005198 1.3e-06 58.2 55 56.4
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 2.9e-06 57.0 39 64.1
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.9e-06 57.0 55 50.9
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.9e-06 57.0 55 50.9


User provided reference genes

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