Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 2.7e-155 552.0 282 100.0
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 9.3e-124 447.2 279 83.5
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 3.0e-122 442.2 284 82.7
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 2.0e-110 402.9 275 76.7
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 2.0e-110 402.9 280 75.7
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 8.8e-106 387.5 284 73.2
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 5.7e-97 358.2 290 70.7
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 3.6e-91 339.0 244 71.7
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 2.0e-89 333.2 253 67.2
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.3e-88 330.5 261 66.3
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.4e-87 326.2 223 73.1
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 3.1e-87 325.9 241 67.2
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 3.1e-87 325.9 244 67.6
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 5.4e-87 325.1 197 79.2
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 1.6e-86 323.6 241 68.5
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 2.0e-86 323.2 249 65.1
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.0e-85 320.9 245 67.3
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.7e-85 320.1 254 65.4
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 5.0e-85 318.5 244 65.2
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 6.5e-85 318.2 281 65.5
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 6.5e-85 318.2 204 76.0
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 8.5e-85 317.8 193 76.2
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 8.5e-85 317.8 193 76.2
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 8.5e-85 317.8 291 59.5
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.1e-84 317.4 281 65.1
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 3.2e-84 315.8 260 62.7
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 7.2e-84 314.7 281 62.6
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 1.0e-82 310.8 236 66.5
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.4e-82 310.5 264 60.6
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 6.8e-82 308.1 297 54.9
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 4.4e-81 305.4 277 57.4
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 7.5e-81 304.7 254 62.6
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 9.8e-81 304.3 242 63.6
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 1.7e-80 303.5 243 63.4
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 3.7e-80 302.4 252 60.3
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 1.8e-79 300.1 275 57.5
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.4e-79 299.7 273 60.8
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.4e-79 299.7 253 58.9
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 4.1e-79 298.9 287 58.2
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 9.1e-79 297.7 244 63.1
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.2e-78 297.4 251 61.8
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 2.0e-78 296.6 248 60.9
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 2.0e-78 296.6 244 63.5
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.0e-78 296.6 259 61.4
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 3.5e-78 295.8 255 60.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 4.5e-78 295.4 247 61.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 5.9e-78 295.0 247 61.5
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 5.9e-78 295.0 254 58.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 7.7e-78 294.7 247 61.5
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 7.7e-78 294.7 244 63.5
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 7.7e-78 294.7 244 63.5
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.3e-77 293.9 250 60.8
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.3e-77 293.9 250 60.8
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 1.3e-77 293.9 208 71.6
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.7e-77 293.5 252 59.9
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.7e-77 293.5 247 61.1
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.3e-77 293.1 251 58.6
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 3.8e-77 292.4 197 70.6
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 8.6e-77 291.2 290 53.8
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 4.2e-76 288.9 250 60.0
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 1.6e-75 287.0 261 59.0
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 2.8e-75 286.2 249 57.4
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 3.6e-75 285.8 256 58.2
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 8.9e-74 281.2 246 60.2
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 8.9e-74 281.2 255 60.0
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.5e-73 280.4 299 54.5
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 5.7e-73 278.5 212 65.6
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 7.0e-71 271.6 194 66.5
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 7.0e-71 271.6 257 57.6
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 3.9e-69 265.8 244 57.4
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.9e-68 263.5 251 55.0
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 5.6e-68 261.9 296 50.7
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 2.3e-66 256.5 154 80.5
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 3.1e-66 256.1 240 55.8
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 2.9e-64 249.6 235 51.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 1.9e-63 246.9 276 52.9
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.9e-63 246.9 215 59.5
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 9.2e-63 244.6 153 80.4
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.6e-62 243.8 227 58.1
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 4.6e-62 242.3 254 55.1
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.0e-61 241.1 244 55.3
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 9.5e-60 234.6 202 62.9
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 3.6e-59 232.6 203 61.6
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 4.7e-59 232.3 346 41.0
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 4.9e-56 222.2 258 50.0
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 1.6e-54 217.2 142 71.1
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 3.1e-50 203.0 256 40.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 2.2e-48 196.8 235 40.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 6.6e-45 185.3 247 42.5
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 5.2e-42 175.6 215 45.6
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 6.8e-42 175.3 135 71.1
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.7e-37 160.6 117 71.8
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 6.6e-37 158.7 197 50.3
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.1e-36 157.9 92 76.1
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 3.5e-30 136.3 92 70.7
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 7.4e-28 128.6 195 34.9
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 2.8e-27 126.7 164 40.9
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.4e-26 124.4 111 63.1
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 2.4e-23 113.6 251 30.3
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.3e-21 107.8 187 43.9
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 6.7e-21 105.5 62 82.3
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 8.1e-19 98.6 117 39.3
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 5.3e-18 95.9 89 51.7
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 2.5e-15 87.0 161 37.9


User provided reference genes

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