Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.6e-149 532.7 273 100.0
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 3.5e-128 461.8 272 82.7
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 1.1e-118 430.3 272 79.4
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 3.8e-114 415.2 277 75.8
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 1.4e-111 406.8 268 79.9
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 3.7e-109 398.7 274 73.7
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 3.1e-108 395.6 271 73.8
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 6.5e-106 387.9 283 69.3
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 3.6e-104 382.1 275 71.6
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 3.6e-104 382.1 274 71.2
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 2.0e-102 376.3 275 70.9
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.5e-99 365.5 274 67.2
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 4.5e-99 365.2 274 67.2
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 1.7e-98 363.2 284 66.5
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 2.9e-98 362.5 276 68.1
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.1e-97 360.5 275 66.9
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.9e-97 359.8 274 65.7
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.9e-97 359.8 269 66.5
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 3.2e-97 359.0 282 66.7
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 4.2e-97 358.6 268 67.2
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.2e-96 357.1 276 66.3
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.0e-95 354.0 274 65.0
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 6.7e-95 351.3 273 64.5
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 2.6e-94 349.4 273 64.1
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.7e-93 346.7 274 64.2
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.7e-93 346.7 272 64.7
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 4.8e-93 345.1 272 62.1
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 6.3e-93 344.7 289 60.9
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 8.3e-93 344.4 274 63.5
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.1e-92 344.0 274 63.1
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.4e-92 343.6 290 61.7
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.4e-92 343.6 274 62.0
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 1.4e-92 343.6 273 65.6
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.8e-92 343.2 272 61.4
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 4.1e-92 342.0 274 63.1
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.0e-91 339.7 275 62.5
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 3.5e-91 339.0 276 62.0
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 3.5e-91 339.0 278 63.3
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 5.9e-91 338.2 307 58.0
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.0e-90 337.4 304 59.2
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 2.2e-90 336.3 270 62.6
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 3.8e-90 335.5 275 62.2
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.1e-89 334.0 273 61.5
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.9e-89 333.2 274 63.1
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.9e-89 333.2 226 69.0
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 7.2e-89 331.3 298 60.4
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 1.6e-88 330.1 274 60.6
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 1.6e-88 330.1 274 60.6
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 2.1e-88 329.7 274 60.6
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 2.7e-88 329.3 335 54.3
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 4.7e-88 328.6 270 60.4
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 6.1e-88 328.2 277 62.1
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 8.0e-88 327.8 275 60.7
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.0e-87 327.4 275 61.5
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.4e-87 327.0 277 61.4
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 4.0e-87 325.5 281 61.6
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 5.2e-87 325.1 322 55.6
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.2e-86 323.9 278 59.7
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 7.5e-86 321.2 265 61.1
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 9.8e-86 320.9 277 62.5
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 1.3e-85 320.5 274 60.6
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.3e-85 320.5 356 51.7
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 1.3e-85 320.5 276 60.1
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 4.8e-85 318.5 211 71.1
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 6.3e-85 318.2 226 68.6
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 8.3e-85 317.8 279 59.1
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 1.4e-84 317.0 262 60.7
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.2e-83 313.9 223 67.3
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 7.7e-83 311.2 233 64.8
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.0e-82 310.8 271 59.4
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.8e-82 308.9 259 59.8
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.5e-81 307.0 316 54.7
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 5.5e-81 305.1 276 59.8
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 7.2e-81 304.7 279 58.4
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 6.1e-80 301.6 272 58.1
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 1.4e-79 300.4 264 59.8
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.8e-79 300.1 227 65.6
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 3.4e-78 295.8 274 58.8
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 7.5e-78 294.7 282 56.0
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 2.2e-77 293.1 264 60.6
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.8e-76 290.0 317 51.4
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 3.2e-76 289.3 201 70.1
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 7.8e-75 284.6 205 68.3
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.9e-74 282.7 189 72.0
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 3.9e-74 282.3 233 61.4
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 4.3e-73 278.9 194 73.2
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 8.0e-72 274.6 268 56.0
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.8e-71 273.5 196 68.4
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 2.3e-71 273.1 237 59.1
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 2.9e-69 266.2 180 68.9
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 8.3e-69 264.6 234 57.7
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.9e-68 263.5 269 50.6
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 5.4e-68 261.9 197 64.5
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 1.6e-67 260.4 228 57.0
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 7.8e-67 258.1 195 65.6
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 5.0e-66 255.4 267 53.6
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 3.3e-65 252.7 278 50.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.8e-64 249.6 213 55.9
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 2.3e-58 229.9 142 75.4
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 2.6e-54 216.5 217 51.2
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.9e-52 210.3 295 46.1
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.9e-52 210.3 174 54.0
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 2.7e-51 206.5 166 53.6
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 3.3e-49 199.5 165 55.8
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 3.1e-47 193.0 136 71.3
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 2.4e-44 183.3 183 54.1
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.5e-38 164.1 215 37.2
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 1.1e-33 147.9 192 47.9
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.4e-28 131.0 107 65.4
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.5e-25 120.2 222 36.9
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.7e-21 107.5 56 82.1
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 2.7e-19 100.1 97 53.6
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 2.3e-18 97.1 59 78.0
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.9e-17 94.0 88 53.4
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 4.3e-17 92.8 59 67.8
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 6.2e-16 89.0 100 49.0
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.2e-14 84.7 78 56.4
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 2.9e-13 80.1 89 44.9
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.5e-09 67.8 91 44.0
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 2.4e-07 60.5 81 44.4


User provided reference genes

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