Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17595_v3 Cicer arietinum L. HOM05D005219 ORTHO05D006451 0.0e+00 1411.0 709 100.0
Medtr8g095210 Medicago truncatula HOM05D005219 ORTHO05D006451 0.0e+00 1178.3 709 83.5
TPR.G12784 Trifolium pratense HOM05D005219 ORTHO05D006451 0.0e+00 1105.1 709 80.8
arahy.Tifrunner.gnm1.ann1.4364K7 Arachis hypogaea HOM05D005219 ORTHO05D006451 1.5e-295 1019.2 717 72.9
arahy.Tifrunner.gnm1.ann1.9Z2GEU Arachis hypogaea HOM05D005219 ORTHO05D006451 2.6e-295 1018.5 717 72.9
Lalb_Chr13g0296831 Lupinus albus HOM05D005219 ORTHO05D006451 1.0e-291 1006.5 715 73.3
Psat7g041880 Pisum sativum HOM05D005219 ORTHO05D006451 5.5e-290 1000.7 630 81.7
Glyma.08G004700 Glycine max HOM05D005219 ORTHO05D006451 3.3e-287 991.5 712 72.6
Lj4g0026114 Lotus japonicus HOM05D005219 ORTHO05D006451 3.1e-285 984.9 726 71.6
Glyma.05G197300 Glycine max HOM05D005219 ORTHO05D006451 5.3e-285 984.2 713 72.9
Lalb_Chr12g0202821 Lupinus albus HOM05D005219 ORTHO05D006451 2.6e-284 981.9 755 68.9
Phvul.002G277800 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 4.1e-277 958.0 714 70.7
Cfa002238 Carpinus fangiana HOM05D005219 ORTHO05D006451 7.3e-258 894.0 726 64.0
CiPaw.03G253500 Carya illinoinensis HOM05D005219 ORTHO05D006451 1.2e-249 866.7 725 63.6
QL10p038974 Quercus lobata HOM05D005219 ORTHO05D006451 8.0e-249 864.0 736 63.0
CiPaw.04G179100 Carya illinoinensis HOM05D005219 ORTHO05D006451 1.4e-248 863.2 724 62.2
Prupe.4G281500 Prunus persica HOM05D005219 ORTHO05D006451 4.4e-247 858.2 716 62.8
Phvul.009G157400 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 6.4e-246 854.4 717 64.4
VMungo1309G1202 Vigna mungo HOM05D005219 ORTHO05D006451 1.4e-240 836.6 728 62.1
MD15G1138200 Malus domestica HOM05D005219 ORTHO05D006451 6.8e-240 834.3 714 61.5
Glyma.06G159700 Glycine max HOM05D005219 ORTHO05D006451 1.2e-239 833.6 755 61.2
RcHm_v2.0_Chr2g0123471 Rosa chinensis HOM05D005219 ORTHO05D006451 8.3e-238 827.4 712 61.4
FvH4_1g25450 Fragaria vesca HOM05D005219 ORTHO05D006451 2.4e-237 825.9 712 61.2
ClCG02G000120 Citrullus lanatus HOM05D005219 ORTHO05D006451 4.6e-236 821.6 722 60.7
FAN23G1877 Fragaria x ananassa HOM05D005219 ORTHO05D006451 3.3e-234 815.5 713 61.3
FAN19G1780 Fragaria x ananassa HOM05D005219 ORTHO05D006451 4.3e-234 815.1 713 60.3
FAN28G0381 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.6e-233 813.1 713 60.7
CsaV3_2G019800 Cucumis sativus L. HOM05D005219 ORTHO05D006451 2.0e-231 806.2 722 59.1
Thecc.01G233500 Theobroma cacao HOM05D005219 ORTHO05D006451 9.9e-231 803.9 729 59.7
FAN26G1898 Fragaria x ananassa HOM05D005219 ORTHO05D006451 5.4e-229 798.1 713 60.0
Cpa.g.sc37.82 Carica papaya HOM05D005219 ORTHO05D006451 1.6e-228 796.6 735 58.5
CANSAT54G2070 Cannabis sativa HOM05D005219 ORTHO05D006451 5.1e-227 791.6 719 59.1
CSS0004797 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 1.2e-225 786.9 733 58.1
Ciclev10025072m.g Citrus clementina HOM05D005219 ORTHO05D006451 1.2e-225 786.9 718 59.2
Gohir.A05G376400 Gossypium hirsutum HOM05D005219 ORTHO05D006451 1.2e-225 786.9 721 59.5
Sed0017542 Sechium edule HOM05D005219 ORTHO05D006451 2.8e-225 785.8 722 58.4
GSVIVG01022419001 Vitis vinifera HOM05D005219 ORTHO05D006451 4.7e-225 785.0 728 57.8
Gorai.012G044600 Gossypium raimondii HOM05D005219 ORTHO05D006451 1.1e-224 783.9 721 58.7
Atru.chr4.1140 Acer truncatum HOM05D005219 ORTHO05D006451 2.4e-224 782.7 724 58.3
CSS0003875 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 5.3e-224 781.6 731 58.3
Actinidia19951 Actinidia chinensis HOM05D005219 ORTHO05D006451 9.0e-224 780.8 724 57.5
Gohir.D04G039600 Gossypium hirsutum HOM05D005219 ORTHO05D006451 2.6e-223 779.2 718 58.4
Duzib147G1025 Durio zibethinus HOM05D005219 ORTHO05D006451 5.8e-223 778.1 727 57.4
Actinidia36586 Actinidia chinensis HOM05D005219 ORTHO05D004865 8.4e-222 774.2 723 57.0
Potri.019G008541 Populus trichocarpa HOM05D005219 ORTHO05D006451 2.1e-220 769.6 720 59.0
TWI75G0018 Tripterygium wilfordii HOM05D005219 ORTHO05D006451 1.7e-219 766.5 720 57.8
Eucgr.I00008 Eucalyptus grandis HOM05D005219 ORTHO05D006451 9.6e-218 760.8 725 56.3
TAR381G1173 Trochodendron aralioides HOM05D005219 ORTHO05D006451 6.2e-217 758.1 734 57.1
Sabra19G0006900 Salix brachista HOM05D005219 ORTHO05D006451 1.8e-216 756.5 719 57.9
Lj4C816G5 Lonicera japonica HOM05D005219 ORTHO05D006451 1.5e-215 753.4 721 55.1
Potri.004G138900 Populus trichocarpa HOM05D005219 ORTHO05D006451 1.7e-214 750.0 720 58.3
PGR142G2743 Punica granatum HOM05D005219 ORTHO05D006451 9.3e-213 744.2 727 55.0
EL10Ac4g08973 Beta vulgaris HOM05D005219 ORTHO05D006451 8.7e-211 737.6 715 55.9
Cc00_g05550 Coffea canephora HOM05D005219 ORTHO05D006451 2.5e-210 736.1 729 55.6
Nn1g08341 Nelumbo nucifera HOM05D005219 ORTHO05D006451 4.8e-209 731.9 735 55.0
HanXRQChr02g0043081 Helianthus annuus HOM05D005219 ORTHO05D006451 1.1e-208 730.7 713 55.1
AUR62004810 Chenopodium quinoa HOM05D005219 ORTHO05D006451 4.0e-208 728.8 707 55.3
Hund06895 Selenicereus undatus HOM05D005219 ORTHO05D006451 2.2e-206 723.0 721 55.6
Lsat_1_v5_gn_5_69540 Lactuca sativa HOM05D005219 ORTHO05D006451 1.6e-204 716.8 711 55.1
Haze_25419 Corylus avellana HOM05D005219 ORTHO05D006451 2.7e-204 716.1 642 60.3
AUR62036029 Chenopodium quinoa HOM05D005219 ORTHO05D006451 3.5e-204 715.7 745 53.6
Ah.06g191770 Amaranthus hybridus HOM05D005219 ORTHO05D006451 1.3e-203 713.8 710 55.1
Aqoxy6G00109 Aquilegia oxysepala HOM05D005219 ORTHO05D006451 2.1e-201 706.4 711 54.7
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 2.0e-199 699.9 703 53.9
Hund22177 Selenicereus undatus HOM05D005219 ORTHO05D006451 9.3e-197 691.0 710 54.6
THA.LOC104818408 Tarenaya hassleriana HOM05D005219 ORTHO05D006451 2.7e-196 689.5 722 52.5
Oeu011013.3 Olea europaea HOM05D005219 ORTHO05D006451 2.3e-195 686.4 710 53.0
MELO3C023202.2 Cucumis melo HOM05D005219 ORTHO05D006451 3.0e-195 686.0 627 58.7
Nitab4.5_0002704g0040 Nicotiana tabacum HOM05D005219 ORTHO05D006451 3.0e-195 686.0 738 52.3
Manes.13G076600 Manihot esculenta HOM05D005219 ORTHO05D006451 2.2e-193 679.9 652 58.7
Nitab4.5_0000496g0030 Nicotiana tabacum HOM05D005219 ORTHO05D006451 2.8e-193 679.5 738 51.9
Carub.0006s0762 Capsella rubella HOM05D005219 ORTHO05D006451 1.4e-192 677.2 739 50.9
Rhsim10G0123800 Rhododendron simsii HOM05D005219 ORTHO05D006451 2.4e-192 676.4 676 54.4
Oeu037875.1 Olea europaea HOM05D005219 ORTHO05D006451 3.4e-191 672.5 707 53.0
BolC9t59579H Brassica oleracea HOM05D005219 ORTHO05D006451 4.5e-191 672.2 732 50.3
AT5G08630 Arabidopsis thaliana HOM05D005219 ORTHO05D006451 1.0e-190 671.0 739 50.3
Peaxi162Scf00525g00059 Petunia axillaris HOM05D005219 ORTHO05D006451 3.8e-190 669.1 737 52.1
A10p28110 Brassica napus HOM05D005219 ORTHO05D006451 1.9e-189 666.8 728 50.8
AL6G19360 Arabidopsis lyrata HOM05D005219 ORTHO05D006451 5.5e-189 665.2 731 51.2
CARHR204350 Cardamine hirsuta HOM05D005219 ORTHO05D006451 5.5e-189 665.2 735 50.3
BcaB08g37236 Brassica carinata HOM05D005219 ORTHO05D006451 1.6e-188 663.7 713 51.3
C09p68310 Brassica napus HOM05D005219 ORTHO05D006451 1.6e-188 663.7 731 49.9
BraA10t44860Z Brassica rapa HOM05D005219 ORTHO05D006451 1.0e-187 661.0 731 49.5
BcaB01g05651 Brassica carinata HOM05D005219 ORTHO05D006451 1.5e-186 657.1 720 50.8
Sopen05g034930 Solanum pennellii HOM05D005219 ORTHO05D006451 2.0e-186 656.8 734 49.9
PGSC0003DMG400023442 Solanum tuberosum HOM05D005219 ORTHO05D006451 2.0e-186 656.8 735 50.6
Solyc05g056530.4 Solanum lycopersicum HOM05D005219 ORTHO05D006451 5.7e-186 655.2 734 50.1
Aa31LG3G17910 Aethionema arabicum HOM05D005219 ORTHO05D006451 7.4e-186 654.8 775 49.4
CAN.G1156.53 Capsicum annuum HOM05D005219 ORTHO05D006451 9.7e-186 654.4 735 49.1
C03p04490 Brassica napus HOM05D005219 ORTHO05D006451 1.7e-185 653.7 720 50.6
DCAR_009584 Daucus carota HOM05D005219 ORTHO05D006451 2.8e-185 652.9 729 50.9
CDE06G1179 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 8.2e-185 651.4 714 50.4
BraA03t09746Z Brassica rapa HOM05D005219 ORTHO05D006451 5.9e-183 645.2 721 50.3
Thhalv10012814m.g Eutrema salsugineum HOM05D005219 ORTHO05D006451 1.3e-182 644.0 727 49.4
A03p04030 Brassica napus HOM05D005219 ORTHO05D006451 1.9e-181 640.2 721 50.1
Sc09g0004330 Simmondsia chinensis HOM05D005219 ORTHO05D006451 3.7e-177 625.9 631 53.9
SGA_v2.0_scaffold54G19585 Striga asiatica HOM05D005219 ORTHO05D006451 4.8e-177 625.5 708 47.9
PSO170G0098 Papaver somniferum HOM05D005219 ORTHO05D006451 7.0e-176 621.7 732 49.7
DCAR_019997 Daucus carota HOM05D005219 ORTHO05D006451 1.0e-174 617.8 710 49.9
HPP92_011421 Vanilla planifolia HOM05D005219 ORTHO05D006451 1.0e-174 617.8 715 48.0
PSO782G1219 Papaver somniferum HOM05D005219 ORTHO05D006451 1.1e-173 614.4 743 48.6
Dinv16800 Davidia involucrata HOM05D005219 ORTHO05D006451 2.0e-170 603.6 602 55.1
Migut.H00795 Erythranthe guttata HOM05D005219 ORTHO05D006451 7.4e-170 601.7 714 47.5
MSTRG.23501 Avicennia marina HOM05D005219 ORTHO05D006451 6.3e-169 598.6 671 49.2
SGA_v2.0_scaffold211G42145 Striga asiatica HOM05D005219 ORTHO05D006451 1.8e-168 597.0 669 47.8
SHI11418 Sapria himalayana HOM05D005219 ORTHO05D006451 1.3e-166 590.9 639 50.9
Hma1.2p1_0057F.1_g032080 Hydrangea macrophylla HOM05D005219 ORTHO05D006451 4.7e-164 582.4 639 53.4
vmacro12733 Vaccinium macrocarpon HOM05D005219 ORTHO05D006451 2.3e-163 580.1 806 45.4
Os02g0556900 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 2.8e-161 573.2 710 45.9
SEGI_19215 Sequoiadendron giganteum HOM05D005219 ORTHO05D006451 1.0e-155 554.7 777 42.9
unitig_899.g14489 Utricularia gibba HOM05D005219 ORTHO05D006451 8.8e-155 551.6 705 46.0
Atru.chr4.1215 Acer truncatum HOM05D005219 ORTHO05D006451 2.6e-154 550.1 543 56.4
Sp6g34240 Schrenkiella parvula HOM05D005219 ORTHO05D006451 2.4e-144 516.9 504 53.2
Zm00001eb182070 Zea mays HOM05D005219 ORTHO05D006451 2.6e-138 496.9 660 43.5
ATR0737G007 Amborella trichopoda HOM05D005219 ORTHO05D006451 2.9e-137 493.4 679 44.0
Mapoly0096s0060 Marchantia polymorpha HOM05D005219 ORTHO05D006451 2.5e-133 480.3 815 38.0
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 2.1e-127 460.7 727 41.7
Pp3c2_17910 Physcomitrium patens HOM05D005219 ORTHO05D006451 4.6e-127 459.5 755 40.5
Pp3c1_29080 Physcomitrium patens HOM05D005219 ORTHO05D006451 7.3e-125 452.2 747 39.5
CDE08G1591 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 1.7e-121 441.0 710 40.0
AagrBONN_evm.TU.Sc2ySwM_344.1599 Anthoceros agrestis HOM05D005219 ORTHO05D006451 2.7e-95 354.0 585 37.4
Pp3c1_29082 Physcomitrium patens HOM05D005219 ORTHO05D006451 7.9e-95 352.4 510 40.2
ATR1136G012 Amborella trichopoda HOM05D005219 ORTHO05D006451 1.6e-92 344.7 694 34.4
Psat7g208160 Pisum sativum HOM05D005219 ORTHO05D006451 1.4e-91 341.7 221 78.3
SMO144G0202 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 7.4e-77 292.7 476 36.1
CBR_g15970 Chara braunii HOM05D005219 ORTHO05D006451 5.7e-69 266.5 674 30.9
SMO169G0116 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 6.7e-62 243.0 439 38.3
SMO169G0082 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 6.1e-47 193.4 222 44.6
Sp6g34250 Schrenkiella parvula HOM05D005219 ORTHO05D006451 1.5e-40 172.2 128 68.0
Os04g0439300 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 1.6e-39 168.7 136 62.5
Cpa.g.c42282 Carica papaya HOM05D005219 ORTHO05D006451 2.1e-39 168.3 96 75.0
Zm00001eb243850 Zea mays HOM05D000001 ORTHO05D000003 2.0e-37 161.8 302 35.4
Haze_25418 Corylus avellana HOM05D005219 ORTHO05D006451 7.5e-37 159.8 98 78.6
ATR0721G071 Amborella trichopoda HOM05D005219 ORTHO05D006451 2.2e-36 158.3 219 42.5
Sabra01G0147700 Salix brachista HOM05D005219 ORTHO05D006451 3.5e-34 151.0 165 52.1
Sabra04G0089200 Salix brachista HOM05D005219 ORTHO05D006451 1.2e-31 142.5 141 49.6
Os04g0439400 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 3.6e-31 141.0 95 67.4
HPP92_027054 Vanilla planifolia HOM05D005219 ORTHO05D006451 2.4e-27 128.3 150 50.0
VMungo1383G0740 Vigna mungo HOM05D005219 ORTHO05D011240 1.2e-26 125.9 95 72.6
Glyma.07G026800 Glycine max HOM05D005219 ORTHO05D021551 2.5e-16 91.7 73 58.9
PGR119G0862 Punica granatum HOM05D005219 ORTHO05D006451 3.4e-13 81.3 248 30.6
CBR_g31875 Chara braunii HOM05D028850 ORTHO05D006451 9.5e-08 63.2 477 23.1
Thhalv10012428m.g Eutrema salsugineum HOM05D001312 ORTHO05D001832 1.6e-07 62.4 249 26.5
Nn2g13967 Nelumbo nucifera HOM05D001312 ORTHO05D001832 1.6e-07 62.4 216 27.3
CBR_g33928 Chara braunii HOM05D001312 ORTHO05D001832 2.1e-07 62.0 245 26.1
PSO339G1313 Papaver somniferum HOM05D001312 ORTHO05D001832 4.7e-07 60.8 160 26.9
A03p10880 Brassica napus HOM05D001312 ORTHO05D001832 1.1e-06 59.7 198 28.3
PSO063G1518 Papaver somniferum HOM05D001312 ORTHO05D001832 1.1e-06 59.7 160 26.9
CBR_g38007 Chara braunii HOM05D001908 ORTHO05D001892 1.4e-06 59.3 176 31.2
Nn6g35082 Nelumbo nucifera HOM05D001312 ORTHO05D001832 2.3e-06 58.5 226 28.8
AL5G23240 Arabidopsis lyrata HOM05D001312 ORTHO05D001832 3.1e-06 58.2 161 29.8
AT5G35210 Arabidopsis thaliana HOM05D001312 ORTHO05D001832 3.1e-06 58.2 246 26.0
Lj2C292T8 Lonicera japonica HOM05D001439 ORTHO05D002726 3.1e-06 58.2 78 39.7
DCAR_006144 Daucus carota HOM05D001312 ORTHO05D001832 4.0e-06 57.8 164 28.0
HanXRQChr04g0117141 Helianthus annuus HOM05D001439 ORTHO05D002726 4.0e-06 57.8 56 46.4
Atru.chr6.2869 Acer truncatum HOM05D001439 ORTHO05D002726 5.2e-06 57.4 80 38.8
BraA03t10398Z Brassica rapa HOM05D001312 ORTHO05D001832 5.2e-06 57.4 238 26.9
Cc02_g13850 Coffea canephora HOM05D001439 ORTHO05D002726 5.2e-06 57.4 95 36.8
Migut.H01470 Erythranthe guttata HOM05D001439 ORTHO05D002726 5.2e-06 57.4 56 48.2
BcaB01g04696 Brassica carinata HOM05D001312 ORTHO05D001832 6.8e-06 57.0 240 24.6
ECA236G3003 Erigeron canadensis HOM05D001455 ORTHO05D001587 6.8e-06 57.0 56 48.2
Mapoly0005s0159 Marchantia polymorpha HOM05D001439 ORTHO05D002726 6.8e-06 57.0 133 27.8
Nitab4.5_0004359g0020 Nicotiana tabacum HOM05D001439 ORTHO05D002726 6.8e-06 57.0 78 38.5
MSTRG.21070 Avicennia marina HOM05D001312 ORTHO05D001832 8.9e-06 56.6 198 26.3
THA.LOC104799531 Tarenaya hassleriana HOM05D001312 ORTHO05D001832 8.9e-06 56.6 161 28.0


User provided reference genes

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