Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 3.8e-85 318.2 164 100.0
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 1.5e-52 209.9 151 78.8
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 6.1e-51 204.5 156 75.6
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 1.3e-48 196.8 151 72.2
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 1.8e-47 193.0 132 81.1
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.2e-43 180.3 133 75.2
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 3.6e-43 178.7 137 73.7
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 6.0e-38 161.4 109 76.1
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 2.3e-37 159.5 135 67.4
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 3.9e-37 158.7 109 75.2
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 3.9e-37 158.7 106 75.5
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 1.1e-36 157.1 109 75.2
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 1.1e-36 157.1 109 70.6
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 3.3e-36 155.6 107 73.8
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 4.3e-36 155.2 109 73.4
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 7.3e-36 154.5 134 62.7
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 9.5e-36 154.1 159 56.6
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 9.5e-36 154.1 109 71.6
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 1.2e-35 153.7 113 70.8
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.2e-35 153.7 109 72.5
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 2.1e-35 152.9 141 61.7
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 2.1e-35 152.9 109 74.3
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 2.1e-35 152.9 109 71.6
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 3.6e-35 152.1 108 72.2
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 4.7e-35 151.8 109 70.6
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 4.7e-35 151.8 132 67.4
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 1.8e-34 149.8 105 73.3
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 2.3e-34 149.4 135 60.7
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 2.3e-34 149.4 152 55.9
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 2.3e-34 149.4 148 58.1
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.3e-34 149.4 109 69.7
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 5.2e-34 148.3 105 71.4
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 6.8e-34 147.9 129 62.0
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 8.9e-34 147.5 109 68.8
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.2e-33 147.1 105 69.5
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 1.5e-33 146.7 147 54.4
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 1.5e-33 146.7 109 67.9
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 2.0e-33 146.4 132 59.8
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 2.0e-33 146.4 147 54.4
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 2.6e-33 146.0 135 62.2
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 2.6e-33 146.0 135 62.2
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 2.6e-33 146.0 157 53.5
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 3.4e-33 145.6 153 55.6
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 3.4e-33 145.6 158 54.4
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 3.4e-33 145.6 127 63.8
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 3.4e-33 145.6 127 63.8
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 5.8e-33 144.8 107 68.2
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 1.3e-32 143.7 153 56.9
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 2.2e-32 142.9 109 67.9
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 2.2e-32 142.9 157 53.5
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 2.2e-32 142.9 158 51.9
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 2.9e-32 142.5 109 64.2
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 3.7e-32 142.1 135 55.6
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 4.9e-32 141.7 109 66.1
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 4.9e-32 141.7 107 65.4
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 4.9e-32 141.7 158 51.3
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 1.9e-31 139.8 107 67.3
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 2.4e-31 139.4 107 64.5
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 3.2e-31 139.0 145 55.9
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 3.2e-31 139.0 145 55.9
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 5.4e-31 138.3 107 65.4
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 1.2e-30 137.1 107 64.5
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 1.2e-30 137.1 108 63.9
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 6.0e-30 134.8 107 62.6
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 6.0e-30 134.8 106 64.2
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.8e-30 134.4 123 58.5
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 1.3e-29 133.7 107 62.6
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 1.3e-29 133.7 107 62.6
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 1.3e-29 133.7 107 62.6
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 1.3e-29 133.7 107 63.6
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.7e-29 133.3 107 62.6
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.7e-29 133.3 107 62.6
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 3.0e-29 132.5 140 52.9
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 3.0e-29 132.5 99 67.7
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 3.9e-29 132.1 127 53.5
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 6.6e-29 131.3 111 60.4
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 1.1e-28 130.6 89 74.2
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.1e-28 130.6 89 75.3
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 1.9e-28 129.8 132 56.1
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 2.5e-28 129.4 107 61.7
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 2.5e-28 129.4 107 61.7
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.3e-28 129.0 89 74.2
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.3e-28 129.0 89 74.2
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 4.3e-28 128.6 127 55.1
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 7.3e-28 127.9 131 51.9
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 7.3e-28 127.9 131 51.9
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.6e-27 126.7 156 46.2
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.6e-27 125.6 89 73.0
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 6.2e-27 124.8 87 71.3
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 1.1e-26 124.0 107 58.9
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.4e-26 123.6 89 67.4
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 1.8e-26 123.2 89 68.5
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 4.0e-26 122.1 108 60.2
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 6.8e-26 121.3 111 59.5
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 1.2e-25 120.6 123 56.9
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 2.0e-25 119.8 112 58.0
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 2.0e-25 119.8 158 46.8
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.3e-24 117.1 89 62.9
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 1.2e-22 110.5 89 60.7
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 4.6e-22 108.6 131 46.6
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 3.9e-21 105.5 73 68.5
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 6.6e-21 104.8 109 54.1
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.5e-20 103.6 128 46.9
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 3.3e-20 102.4 83 60.2
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 7.3e-20 101.3 119 50.4
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 4.7e-19 98.6 73 68.5
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 4.7e-19 98.6 102 50.0
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 5.2e-18 95.1 90 58.9
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 1.2e-17 94.0 138 44.9
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 5.8e-17 91.7 64 67.2
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 7.6e-17 91.3 103 47.6
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 7.6e-17 91.3 99 42.4
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 2.9e-16 89.4 74 58.1
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 3.5e-14 82.4 126 42.9
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 3.0e-13 79.3 84 46.4
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 3.0e-13 79.3 66 60.6
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 6.6e-13 78.2 105 45.7
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 1.9e-12 76.6 107 50.5
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 1.9e-12 76.6 53 62.3
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 2.8e-11 72.8 105 46.7
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 1.1e-10 70.9 59 59.3
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 4.4e-09 65.5 43 69.8
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 9.9e-09 64.3 73 45.2
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 9.9e-09 64.3 73 45.2
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 1.7e-08 63.5 55 58.2
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 1.4e-07 60.5 62 53.2
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 1.4e-07 60.5 44 68.2
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 1.4e-07 60.5 44 68.2
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 1.9e-07 60.1 62 53.2
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 5.4e-07 58.5 44 65.9
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 7.1e-07 58.2 44 65.9


User provided reference genes

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