Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 1.7e-210 735.7 373 100.0
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.7e-181 639.4 371 87.1
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 2.1e-171 605.9 362 84.0
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.6e-163 579.7 357 79.0
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 4.8e-160 568.2 373 75.6
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 1.1e-159 567.0 361 78.1
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 1.1e-159 567.0 361 78.1
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 1.1e-159 567.0 361 78.1
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 2.9e-157 558.9 358 77.4
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 8.5e-157 557.4 358 77.7
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.3e-152 543.5 363 75.8
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 1.3e-152 543.5 363 76.0
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 5.3e-151 538.1 363 75.2
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 1.5e-140 503.4 356 70.2
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 2.5e-140 502.7 360 67.2
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 5.5e-140 501.5 360 67.2
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.6e-139 500.0 352 69.6
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 4.7e-139 498.4 355 70.1
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.0e-138 497.3 349 69.6
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.4e-138 496.9 356 68.8
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.4e-138 496.9 352 69.3
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 5.2e-138 495.0 360 68.3
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 8.8e-138 494.2 360 68.3
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 4.4e-137 491.9 351 68.1
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 4.4e-137 491.9 357 67.5
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 9.7e-137 490.7 358 66.5
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.3e-136 490.3 361 66.5
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.3e-136 490.3 356 68.5
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 1.3e-136 490.3 359 65.7
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 6.3e-136 488.0 359 67.4
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.1e-135 487.3 350 68.0
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 2.4e-135 486.1 356 67.4
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 3.1e-135 485.7 360 66.7
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 5.3e-135 485.0 391 62.1
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 2.0e-134 483.0 347 68.6
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 4.5e-134 481.9 355 67.0
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.0e-133 480.7 355 67.3
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 1.0e-133 480.7 354 65.8
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.7e-133 479.9 351 66.7
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.7e-133 479.9 348 67.0
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.2e-133 479.6 360 64.4
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.9e-132 476.5 348 66.4
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 3.2e-132 475.7 352 67.0
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 9.4e-132 474.2 355 65.4
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 1.2e-131 473.8 350 65.4
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.0e-130 470.7 355 65.4
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 1.4e-130 470.3 358 64.0
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 5.2e-130 468.4 353 64.0
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 5.2e-130 468.4 358 63.4
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 6.8e-130 468.0 358 63.4
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 8.8e-130 467.6 358 62.8
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 9.8e-129 464.2 355 63.7
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.8e-128 462.6 355 65.9
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 8.3e-128 461.1 356 64.0
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.1e-127 460.7 356 64.3
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 3.1e-127 459.1 357 64.1
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 2.0e-126 456.4 354 61.3
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.0e-125 454.1 357 63.6
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 2.3e-125 453.0 319 68.3
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 3.8e-125 452.2 358 63.4
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 5.0e-125 451.8 356 61.8
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 6.5e-125 451.4 352 64.2
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.6e-123 446.8 319 68.0
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 3.6e-123 445.7 355 64.5
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.0e-122 444.1 355 61.7
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 2.6e-121 439.5 412 55.6
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 4.4e-121 438.7 394 57.6
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 1.7e-120 436.8 356 59.0
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 3.1e-119 432.6 319 67.4
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 3.1e-119 432.6 352 60.5
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 7.0e-119 431.4 314 67.2
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 4.5e-118 428.7 319 65.5
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 1.3e-117 427.2 354 60.5
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 8.0e-115 417.9 352 58.8
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.3e-112 410.6 323 61.9
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 4.9e-112 408.7 355 54.9
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.0e-109 401.0 356 56.2
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.3e-106 389.8 354 56.2
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 8.9e-106 387.9 287 66.6
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 8.9e-106 387.9 355 56.3
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 3.3e-92 342.8 227 74.9
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 4.3e-92 342.4 352 52.6
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 2.6e-89 333.2 341 46.6
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 7.1e-87 325.1 242 66.5
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 2.7e-86 323.2 187 85.6
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 7.8e-86 321.6 344 47.4
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.0e-85 321.2 343 49.6
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 8.7e-85 318.2 344 50.6
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 3.6e-83 312.8 182 86.8
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 1.5e-81 307.4 217 74.2
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 2.9e-80 303.1 340 45.9
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 3.3e-68 263.1 303 51.2
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.9e-55 220.7 477 32.3
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.2e-38 164.9 146 58.2
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.0e-36 157.5 131 57.3
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.0e-36 157.5 131 57.3
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.1e-30 136.0 265 34.7
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.6e-25 121.3 161 41.6
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.8e-19 99.8 90 53.3
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.7e-16 91.3 88 45.5
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 4.2e-15 86.7 88 43.2
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.8e-13 81.3 80 53.8
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 6.3e-11 72.8 96 47.9


User provided reference genes

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