Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.8e-128 462.6 230 100.0
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 3.5e-113 411.8 231 90.0
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 3.4e-108 395.2 232 85.3
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 3.8e-107 391.7 230 83.5
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 6.1e-105 384.4 230 84.8
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 7.9e-105 384.0 230 84.8
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 1.7e-102 376.3 230 82.2
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.7e-102 376.3 225 84.4
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 7.7e-100 367.5 235 79.6
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 6.1e-97 357.8 245 76.3
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 1.0e-91 340.5 236 72.5
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 8.5e-91 337.4 239 70.7
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 7.2e-90 334.3 229 70.3
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 2.1e-89 332.8 229 71.2
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 8.0e-89 330.9 232 68.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 6.7e-88 327.8 224 70.5
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 8.8e-88 327.4 227 69.6
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.1e-87 327.0 230 66.5
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.1e-87 327.0 225 70.2
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.1e-87 327.0 227 70.9
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.5e-87 326.6 221 71.5
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.5e-87 326.6 232 67.2
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.6e-87 325.9 223 72.2
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.6e-87 325.9 234 67.9
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.6e-87 325.9 201 78.6
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 5.7e-87 324.7 234 66.7
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 7.4e-87 324.3 232 66.8
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 9.7e-87 323.9 200 76.0
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 1.3e-86 323.6 236 66.9
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.7e-86 323.2 200 75.5
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.1e-85 320.5 234 67.5
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 3.1e-85 318.9 200 76.5
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 5.3e-85 318.2 202 74.8
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 7.0e-85 317.8 202 74.8
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 7.0e-85 317.8 201 75.1
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 9.1e-85 317.4 204 73.0
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 1.2e-84 317.0 206 73.8
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 2.0e-84 316.2 223 68.6
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.6e-84 315.8 232 66.4
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 2.6e-84 315.8 204 71.1
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 5.9e-84 314.7 215 69.8
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.0e-83 313.9 198 74.7
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 1.3e-83 313.5 214 71.0
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 1.3e-83 313.5 232 65.9
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.7e-83 313.2 223 67.7
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.7e-83 313.2 223 67.7
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 2.9e-83 312.4 236 65.7
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.8e-83 312.0 204 72.5
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 6.5e-83 311.2 223 67.3
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 8.5e-83 310.8 223 66.8
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 1.5e-82 310.1 201 70.6
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.5e-82 310.1 232 65.1
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.5e-82 310.1 202 72.3
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 3.2e-82 308.9 204 70.6
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 3.2e-82 308.9 230 63.5
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 5.5e-82 308.1 225 67.6
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 5.5e-82 308.1 225 67.1
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 7.2e-82 307.8 223 66.8
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 7.2e-82 307.8 203 73.4
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 8.0e-81 304.3 202 70.3
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.0e-80 303.9 201 69.2
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.0e-80 303.9 199 72.4
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.4e-80 303.5 231 63.6
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.8e-80 303.1 199 71.9
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.3e-80 302.8 224 64.7
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 2.3e-80 302.8 231 63.6
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.3e-80 302.8 202 69.8
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 3.0e-80 302.4 186 73.1
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.0e-80 302.4 203 70.9
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 4.0e-80 302.0 224 66.5
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 5.2e-80 301.6 224 65.2
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 5.2e-80 301.6 236 63.1
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.2e-79 300.4 203 68.0
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.2e-79 300.4 234 62.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.3e-78 297.0 229 61.6
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 3.7e-78 295.4 228 61.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.1e-77 292.4 250 56.8
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 2.0e-76 289.7 227 63.9
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 3.5e-76 288.9 198 69.7
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.0e-75 287.3 199 69.3
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.3e-75 287.0 224 63.8
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.9e-75 285.8 234 61.5
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 3.8e-75 285.4 201 65.7
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 6.5e-75 284.6 163 86.5
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 1.1e-74 283.9 185 71.9
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 7.2e-74 281.2 199 66.3
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 8.0e-73 277.7 183 72.1
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.3e-72 276.2 230 59.6
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 8.8e-72 274.2 239 58.6
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 1.2e-71 273.9 222 61.3
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.5e-71 273.5 226 57.5
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 6.3e-70 268.1 278 51.4
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 3.1e-69 265.8 202 60.9
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.7e-68 262.7 174 73.0
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.9e-67 259.2 174 73.0
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 1.6e-65 253.4 197 60.4
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.2e-63 247.3 182 64.8
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 7.5e-63 244.6 199 60.8
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 3.1e-61 239.2 161 72.0
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 8.0e-57 224.6 203 52.2
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.4e-56 223.8 159 64.8
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 1.1e-48 197.6 138 68.1
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.4e-48 197.2 182 56.6
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 1.5e-47 193.7 114 85.1
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.9e-46 189.5 136 61.8
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 3.9e-43 179.1 114 71.9
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 4.3e-42 175.6 132 62.9
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.8e-39 165.2 113 71.7
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 6.4e-38 161.8 87 80.5
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 4.3e-34 149.1 85 90.6
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 6.2e-33 145.2 87 73.6
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 5.8e-31 138.7 91 73.6
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 7.6e-31 138.3 92 72.8
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 9.2e-29 131.3 119 60.5
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-28 131.0 84 72.6
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 3.5e-28 129.4 88 71.6
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 1.3e-25 120.9 80 71.2
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 7.6e-23 111.7 113 50.4
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 8.4e-22 108.2 79 62.0
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 3.2e-21 106.3 70 65.7
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 1.3e-19 100.9 65 70.8
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.5e-18 96.7 68 67.6
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.3e-14 84.3 71 59.2
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 1.9e-13 80.5 52 76.9
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 7.6e-07 58.5 136 30.1
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 7.6e-07 58.5 136 30.1


User provided reference genes

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