Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 0.0e+00 1089.7 588 100.0
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 3.9e-148 529.3 544 62.3
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 7.6e-144 515.0 506 63.0
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 1.2e-141 507.7 617 51.5
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 7.6e-136 488.4 445 61.3
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.0e-132 478.0 604 49.2
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 1.1e-131 474.6 603 49.8
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 1.6e-122 444.1 621 45.7
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 2.1e-101 374.0 432 52.8
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 4.7e-101 372.9 663 39.1
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 5.4e-73 279.6 467 40.3
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 3.6e-69 266.9 386 43.0
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 2.6e-67 260.8 393 41.5
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.9e-65 254.6 390 40.8
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 4.1e-65 253.4 390 41.3
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.6e-64 251.5 391 40.2
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 2.0e-64 251.1 435 37.2
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 1.0e-63 248.8 475 36.2
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 5.2e-60 236.5 408 39.5
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 2.0e-59 234.6 455 34.1
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.0e-59 234.6 410 38.8
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 3.4e-59 233.8 412 36.4
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 4.9e-58 229.9 414 37.2
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-56 224.6 386 35.5
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.3e-55 221.1 438 35.8
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.3e-55 221.1 389 38.3
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-54 218.8 495 30.7
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 3.3e-54 217.2 461 33.8
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 9.5e-54 215.7 412 35.9
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.6e-53 213.8 495 30.5
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 8.1e-53 212.6 424 35.6
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 4.0e-52 210.3 372 37.9
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 5.2e-52 209.9 450 35.1
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 2.6e-51 207.6 390 37.7
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 5.8e-51 206.5 457 33.0
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 8.4e-50 202.6 455 33.4
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 1.1e-49 202.2 362 36.5
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 7.1e-49 199.5 411 36.3
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 7.1e-49 199.5 399 36.6
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-48 198.7 489 29.2
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 2.1e-48 198.0 453 33.3
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 4.6e-48 196.8 383 37.6
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 3.3e-46 190.7 354 36.2
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 1.2e-45 188.7 428 32.9
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 2.1e-45 188.0 375 33.9
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 6.2e-45 186.4 373 35.7
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 8.1e-45 186.0 375 34.9
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 1.8e-44 184.9 397 33.2
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 2.4e-44 184.5 396 33.3
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 8.9e-44 182.6 377 34.7
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.5e-43 181.8 370 35.1
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 2.0e-43 181.4 371 34.5
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 9.9e-43 179.1 375 34.4
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 3.8e-42 177.2 375 35.7
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 5.4e-41 173.3 427 30.7
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 5.4e-41 173.3 350 32.0
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 4.6e-40 170.2 385 29.9
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.7e-39 168.3 368 32.6
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 3.0e-39 167.5 427 30.7
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 1.6e-37 161.8 379 31.7
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 8.1e-37 159.5 350 33.7
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 8.1e-37 159.5 356 34.3
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 1.1e-36 159.1 355 32.7
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.8e-36 158.3 189 46.6
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.1e-36 157.5 189 46.6
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 5.3e-36 156.8 429 29.6
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.5e-35 155.2 241 39.8
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-34 151.8 383 32.9
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 1.9e-33 148.3 252 35.7
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 4.2e-33 147.1 342 31.9
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.7e-32 144.4 180 45.0
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.3e-30 137.5 220 38.2
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 2.4e-28 131.3 154 48.1
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 4.0e-28 130.6 382 29.3
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 5.8e-27 126.7 428 28.0
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.7e-26 125.2 326 28.8
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.9e-26 123.6 308 30.2
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.9e-25 121.7 104 56.7
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 2.4e-25 121.3 108 59.3
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 5.5e-25 120.2 255 32.5
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 7.1e-25 119.8 402 27.6
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 7.1e-25 119.8 429 27.7
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 9.3e-25 119.4 96 59.4
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 1.1e-22 112.5 90 58.9
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.6e-22 109.4 79 62.0
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.6e-22 109.4 79 62.0
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.1e-21 106.3 79 60.8
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.8e-20 105.1 79 60.8
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.8e-20 105.1 79 60.8
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 2.4e-20 104.8 93 58.1
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.1e-20 104.4 79 59.5
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-19 102.4 85 57.6
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-19 102.4 79 59.5
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 1.5e-19 102.1 96 50.0
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 1.3e-18 99.0 171 39.2
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 3.8e-18 97.4 70 64.3
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 3.8e-18 97.4 113 46.9
Lalb_Chr05g0223961 Lupinus albus HOM05D005777 ORTHO05D006854 3.8e-18 97.4 121 46.3
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 1.4e-17 95.5 113 47.8
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 1.9e-17 95.1 88 50.0
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 2.5e-17 94.7 70 61.4
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.2e-17 94.0 115 47.0
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 7.1e-17 93.2 148 37.2
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 7.1e-17 93.2 156 39.1
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 1.6e-16 92.0 176 36.4
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.5e-16 90.9 83 53.0
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 2.3e-15 88.2 72 56.9
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 5.1e-15 87.0 171 36.3
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 8.7e-15 86.3 72 55.6
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 8.7e-15 86.3 72 55.6
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-14 85.9 77 55.8
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 1.1e-14 85.9 82 57.3
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 1.9e-14 85.1 70 57.1
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 9.6e-14 82.8 72 54.2
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 9.6e-14 82.8 164 34.8
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 3.7e-13 80.9 108 40.7
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 3.7e-13 80.9 85 45.9
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 1.4e-12 79.0 74 48.6
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.8e-12 78.6 214 29.9
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 2.2e-10 71.6 76 50.0
TPR.G3392 Trifolium pratense HOM05D005777 ORTHO05D006854 7.2e-09 66.6 106 70.8
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 6.1e-08 63.5 56 58.9
Eucgr.H03760 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.3e-07 61.6 59 55.9
PSO063G6181 Papaver somniferum HOM05D005777 ORTHO05D006854 1.9e-06 58.5 70 44.3
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 3.3e-06 57.8 35 71.4
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 4.3e-06 57.4 90 40.0


User provided reference genes

Program Settings