Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17428_v3 Cicer arietinum L. HOM05D016094 ORTHO05D011758 7.5e-166 587.4 367 100.0
Ca_17437_v3 Cicer arietinum L. HOM05D016094 ORTHO05D011758 7.5e-166 587.4 367 100.0
Medtr8g101290 Medicago truncatula HOM05D016094 ORTHO05D011758 1.1e-105 387.5 325 71.7
TPR.G25477 Trifolium pratense HOM05D016094 ORTHO05D011758 9.1e-95 351.3 326 66.0
Psat7g021040 Pisum sativum HOM05D016094 ORTHO05D011758 8.0e-83 311.6 259 74.9
Lj1g0015629 Lotus japonicus HOM05D016094 ORTHO05D011758 5.9e-78 295.4 328 61.3
Lalb_Chr03g0039651 Lupinus albus HOM05D016094 ORTHO05D011758 2.5e-52 210.3 351 57.3
arahy.Tifrunner.gnm1.ann1.J3TRVX Arachis hypogaea HOM05D016094 ORTHO05D011758 3.6e-51 206.5 331 45.3
Glyma.01G077900 Glycine max HOM05D016094 ORTHO05D011758 2.7e-46 190.3 325 40.3
Cfa001748 Carpinus fangiana HOM05D001509 ORTHO05D011758 8.1e-19 99.0 131 42.7
QL08p052749 Quercus lobata HOM05D032978 ORTHO05D011758 2.2e-16 90.9 125 42.4
CiPaw.01G263400 Carya illinoinensis HOM05D001509 ORTHO05D011758 6.4e-16 89.4 132 38.6
Sp4g19720 Schrenkiella parvula HOM05D001509 ORTHO05D001361 2.3e-13 80.9 204 31.9
Nn2g10513 Nelumbo nucifera HOM05D001509 ORTHO05D001361 3.0e-13 80.5 203 33.5
PGR004G1896 Punica granatum HOM05D001509 ORTHO05D001361 1.1e-12 78.6 166 32.5
Carub.0005s2013 Capsella rubella HOM05D001509 ORTHO05D001361 2.5e-12 77.4 200 31.0
AT2G37400 Arabidopsis thaliana HOM05D001509 ORTHO05D001361 4.3e-12 76.6 204 31.9
CARHR132190 Cardamine hirsuta HOM05D001509 ORTHO05D001361 5.6e-12 76.3 204 31.9
Thhalv10010528m.g Eutrema salsugineum HOM05D001509 ORTHO05D001361 5.6e-12 76.3 200 31.0
GSVIVG01025601001 Vitis vinifera HOM05D001509 ORTHO05D001361 5.6e-12 76.3 169 35.5
Sabra16G0085900 Salix brachista HOM05D001509 ORTHO05D001361 9.6e-12 75.5 208 30.3
Sabra16G0088000 Salix brachista HOM05D001509 ORTHO05D001361 9.6e-12 75.5 208 30.3
Thhalv10017513m.g Eutrema salsugineum HOM05D001509 ORTHO05D001361 1.6e-11 74.7 204 33.8
Gohir.D13G097800 Gossypium hirsutum HOM05D001509 ORTHO05D001361 2.8e-11 73.9 202 32.7
Carub.0004s1932 Capsella rubella HOM05D001509 ORTHO05D001361 3.7e-11 73.6 204 32.4
TAR633G2683 Trochodendron aralioides HOM05D001509 ORTHO05D001361 4.8e-11 73.2 205 33.7
AL4G33790 Arabidopsis lyrata HOM05D001509 ORTHO05D001361 6.2e-11 72.8 204 30.4
Gorai.001G250200 Gossypium raimondii HOM05D001509 ORTHO05D001361 6.2e-11 72.8 173 32.4
AL5G34490 Arabidopsis lyrata HOM05D001509 ORTHO05D001361 8.1e-11 72.4 200 30.0
AT3G53560 Arabidopsis thaliana HOM05D001509 ORTHO05D001361 8.1e-11 72.4 200 29.5
Potri.016G080000 Populus trichocarpa HOM05D001509 ORTHO05D001361 8.1e-11 72.4 202 29.2
Cpa.g.sc114.2 Carica papaya HOM05D001509 ORTHO05D001361 1.1e-10 72.0 216 28.7
Manes.09G085800 Manihot esculenta HOM05D001509 ORTHO05D001361 1.4e-10 71.6 164 31.7
TWI74G0580 Tripterygium wilfordii HOM05D001509 ORTHO05D001361 2.4e-10 70.9 341 26.7
Aa31LG5G22810 Aethionema arabicum HOM05D001509 ORTHO05D001361 3.1e-10 70.5 176 31.8
Nn2g12863 Nelumbo nucifera HOM05D001509 ORTHO05D001361 4.0e-10 70.1 207 31.4
THA.LOC104814084 Tarenaya hassleriana HOM05D012174 ORTHO05D011758 4.0e-10 70.1 194 25.8
TWI77G0741 Tripterygium wilfordii HOM05D001509 ORTHO05D001361 5.3e-10 69.7 338 25.4
Aa31LG1G11310 Aethionema arabicum HOM05D012174 ORTHO05D011758 6.9e-10 69.3 187 28.9
Lalb_Chr20g0113111 Lupinus albus HOM05D001509 ORTHO05D001361 6.9e-10 69.3 199 29.1
Potri.006G213600 Populus trichocarpa HOM05D001509 ORTHO05D001361 6.9e-10 69.3 208 29.8
EL10Ac2g03245 Beta vulgaris HOM05D001509 ORTHO05D001361 9.0e-10 68.9 207 29.0
BcaB02g07775 Brassica carinata HOM05D001509 ORTHO05D001361 9.0e-10 68.9 199 30.7
COL.COLO4_14876 Corchorus olitorius HOM05D001509 ORTHO05D001361 9.0e-10 68.9 201 31.3
Manes.08G075200 Manihot esculenta HOM05D001509 ORTHO05D001361 9.0e-10 68.9 207 29.0
CARHR163460 Cardamine hirsuta HOM05D001509 ORTHO05D001361 2.0e-09 67.8 204 29.9
Sp5g08780 Schrenkiella parvula HOM05D001509 ORTHO05D001361 2.0e-09 67.8 200 30.0
Sc20g0004440 Simmondsia chinensis HOM05D001509 ORTHO05D001361 2.0e-09 67.8 165 33.9
Actinidia13119 Actinidia chinensis HOM05D001509 ORTHO05D001361 2.6e-09 67.4 152 31.6
A03p20630 Brassica napus HOM05D001509 ORTHO05D001361 2.6e-09 67.4 210 29.5
CANSAT80G1471 Cannabis sativa HOM05D001509 ORTHO05D001361 2.6e-09 67.4 204 28.4
PSO339G1527 Papaver somniferum HOM05D001509 ORTHO05D001361 3.4e-09 67.0 218 28.0
Aqoxy4G03054 Aquilegia oxysepala HOM05D001509 ORTHO05D001361 4.5e-09 66.6 183 30.6
AT1G01990 Arabidopsis thaliana HOM05D012174 ORTHO05D011758 4.5e-09 66.6 183 29.0
Duzib128G0996 Durio zibethinus HOM05D001509 ORTHO05D001361 4.5e-09 66.6 205 30.7
Gohir.A13G090200 Gossypium hirsutum HOM05D001509 ORTHO05D001361 4.5e-09 66.6 202 31.2
BcaNung05289 Brassica carinata HOM05D012174 ORTHO05D011758 9.9e-09 65.5 181 30.4
A03p00840 Brassica napus HOM05D001509 ORTHO05D001361 9.9e-09 65.5 207 30.0
C05p00150 Brassica napus HOM05D012174 ORTHO05D011758 9.9e-09 65.5 181 30.4
BolC5t28805H Brassica oleracea HOM05D012174 ORTHO05D011758 9.9e-09 65.5 181 30.4
CDE08G0309 Ceratophyllum demersum HOM05D001509 ORTHO05D001361 9.9e-09 65.5 213 33.8
Atru.chr8.2481 Acer truncatum HOM05D001509 ORTHO05D001361 1.3e-08 65.1 202 29.7
A10p00150 Brassica napus HOM05D012174 ORTHO05D011758 1.3e-08 65.1 187 29.9
BraA10t42294Z Brassica rapa HOM05D012174 ORTHO05D011758 1.3e-08 65.1 187 29.9
Eucgr.A01225 Eucalyptus grandis HOM05D001509 ORTHO05D001361 1.3e-08 65.1 160 33.1
Sabra06G0164500 Salix brachista HOM05D001509 ORTHO05D001361 1.3e-08 65.1 208 28.8
AL1G10330 Arabidopsis lyrata HOM05D012174 ORTHO05D011758 1.7e-08 64.7 182 30.2
BcaB06g28988 Brassica carinata HOM05D001509 ORTHO05D001361 1.7e-08 64.7 209 28.7
BraA03t09467Z Brassica rapa HOM05D001509 ORTHO05D001361 1.7e-08 64.7 207 29.5
AUR62043010 Chenopodium quinoa HOM05D001509 ORTHO05D001361 1.7e-08 64.7 206 27.7
PSO206G0027 Papaver somniferum HOM05D001509 ORTHO05D001361 1.7e-08 64.7 218 27.5
Rhsim04G0153100 Rhododendron simsii HOM05D001509 ORTHO05D001361 1.7e-08 64.7 217 30.4
A04p28550 Brassica napus HOM05D001509 ORTHO05D001361 2.2e-08 64.3 176 29.0
BraA04t18333Z Brassica rapa HOM05D001509 ORTHO05D001361 2.2e-08 64.3 176 29.0
Aa31LG10G9570 Aethionema arabicum HOM05D001509 ORTHO05D001361 2.9e-08 63.9 202 28.7
BcaB03g13628 Brassica carinata HOM05D012174 ORTHO05D011758 2.9e-08 63.9 181 29.3
CSS0022606 Camellia sinensis var. sinensis HOM05D001509 ORTHO05D001361 3.8e-08 63.5 208 32.2
QL07p046613 Quercus lobata HOM05D001509 ORTHO05D001361 4.9e-08 63.2 198 29.8
C04p65880 Brassica napus HOM05D001509 ORTHO05D001361 8.4e-08 62.4 176 29.5
BcaC02g07523 Brassica carinata HOM05D001509 ORTHO05D001361 1.1e-07 62.0 206 28.2
Thhalv10008646m.g Eutrema salsugineum HOM05D012174 ORTHO05D011758 1.1e-07 62.0 189 27.5
BolC4t28092H Brassica oleracea HOM05D001509 ORTHO05D001361 1.4e-07 61.6 176 29.5
CSS0017481 Camellia sinensis var. sinensis HOM05D001509 ORTHO05D001361 1.9e-07 61.2 333 24.9
QL08p052754 Quercus lobata HOM05D032978 ORTHO05D011758 1.9e-07 61.2 131 31.3
BcaB01g06179 Brassica carinata HOM05D001509 ORTHO05D001361 2.4e-07 60.8 207 27.5
BolC3t12669H Brassica oleracea HOM05D001509 ORTHO05D001361 2.4e-07 60.8 207 27.5
CiPaw.09G187400 Carya illinoinensis HOM05D001509 ORTHO05D001361 2.4e-07 60.8 170 29.4
Dinv35652 Davidia involucrata HOM05D001509 ORTHO05D001361 2.4e-07 60.8 345 27.8
AUR62040878 Chenopodium quinoa HOM05D001509 ORTHO05D001361 3.2e-07 60.5 206 27.2
Peaxi162Scf00039g00073 Petunia axillaris HOM05D001509 ORTHO05D001361 3.2e-07 60.5 173 27.7
Aqoxy2G01993 Aquilegia oxysepala HOM05D001509 ORTHO05D001361 4.2e-07 60.1 174 27.6
C03p01090 Brassica napus HOM05D001509 ORTHO05D001361 5.5e-07 59.7 207 27.1
Lalb_Chr01g0019181 Lupinus albus HOM05D001509 ORTHO05D001361 5.5e-07 59.7 197 25.9
Sp1g00310 Schrenkiella parvula HOM05D012174 ORTHO05D011758 5.5e-07 59.7 193 26.9
TAR636G3525 Trochodendron aralioides HOM05D001509 ORTHO05D001361 5.5e-07 59.7 205 28.3
Solyc09g005740.3 Solanum lycopersicum HOM05D001509 ORTHO05D001361 7.1e-07 59.3 181 27.6
Sopen09g001630 Solanum pennellii HOM05D001509 ORTHO05D001361 7.1e-07 59.3 181 27.6
Nitab4.5_0010623g0010 Nicotiana tabacum HOM05D001509 ORTHO05D001361 9.3e-07 58.9 175 30.3
PGSC0003DMG400011057 Solanum tuberosum HOM05D001509 ORTHO05D001361 1.2e-06 58.5 206 25.7
Dinv37218 Davidia involucrata HOM05D001509 ORTHO05D001361 1.6e-06 58.2 350 29.7
Sp6g39930 Schrenkiella parvula HOM05D001509 ORTHO05D001361 1.6e-06 58.2 139 25.9
BcaB01g06177 Brassica carinata HOM05D001509 ORTHO05D001361 2.1e-06 57.8 207 26.6
BcaB01g06194 Brassica carinata HOM05D001509 ORTHO05D001361 2.1e-06 57.8 207 26.6
Haze_20718 Corylus avellana HOM05D001509 ORTHO05D001361 2.1e-06 57.8 164 30.5
Carub.0001s0023 Capsella rubella HOM05D012174 ORTHO05D011758 2.7e-06 57.4 184 26.1
Cfa017445 Carpinus fangiana HOM05D001509 ORTHO05D001361 2.7e-06 57.4 334 31.4
ClCG04G008510 Citrullus lanatus HOM05D001509 ORTHO05D001361 2.7e-06 57.4 203 28.6
MD12G1136200 Malus domestica HOM05D001509 ORTHO05D001361 2.7e-06 57.4 205 25.4
Nitab4.5_0002995g0040 Nicotiana tabacum HOM05D001509 ORTHO05D001361 2.7e-06 57.4 175 29.1
MELO3C003097.2 Cucumis melo HOM05D001509 ORTHO05D001361 3.5e-06 57.0 162 32.1
TPR.G13596 Trifolium pratense HOM05D012653 ORTHO05D015404 3.5e-06 57.0 37 70.3
Hma1.2p1_0350F.1_g132460 Hydrangea macrophylla HOM05D001509 ORTHO05D001361 4.6e-06 56.6 200 28.0
Sopen10g034030 Solanum pennellii HOM05D001509 ORTHO05D001361 4.6e-06 56.6 206 25.7


User provided reference genes

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