Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17417_v3 Cicer arietinum L. HOM05D005458 ORTHO05D005672 2.8e-26 121.3 67 100.0
Psat3g147360 Pisum sativum HOM05D005458 ORTHO05D005672 4.5e-24 114.0 67 95.5
Medtr7g056410 Medicago truncatula HOM05D005458 ORTHO05D005672 1.9e-19 98.6 61 90.2
TPR.G14533 Trifolium pratense HOM05D005458 ORTHO05D005672 5.6e-19 97.1 56 94.6
Phvul.008G127837 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 1.6e-18 95.5 67 86.6
TWI75G0430 Tripterygium wilfordii HOM05D005458 ORTHO05D005672 1.8e-17 92.0 63 88.9
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 1.2e-16 89.4 67 82.1
Thecc.01G224300 Theobroma cacao HOM05D005458 ORTHO05D005672 4.5e-16 87.4 69 81.2
Lj1g0002931 Lotus japonicus HOM05D005458 ORTHO05D005672 9.9e-16 86.3 68 77.9
Potri.017G055501 Populus trichocarpa HOM05D005458 ORTHO05D005672 1.3e-15 85.9 65 81.5
Peaxi162Scf00047g00517 Petunia axillaris HOM05D005458 ORTHO05D005672 2.2e-15 85.1 62 82.3
CANSAT11G1273 Cannabis sativa HOM05D005458 ORTHO05D005672 3.8e-15 84.3 66 74.2
CsaV3_2G011550 Cucumis sativus L. HOM05D005458 ORTHO05D005672 6.4e-15 83.6 65 80.0
Ciclev10006390m.g Citrus clementina HOM05D005458 ORTHO05D005672 1.1e-14 82.8 63 81.0
CiPaw.01G120800 Carya illinoinensis HOM05D005458 ORTHO05D005672 1.9e-14 82.0 66 75.8
Phvul.010G019701 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 1.9e-14 82.0 62 77.4
Lalb_Chr01g0022281 Lupinus albus HOM05D005458 ORTHO05D005672 2.4e-14 81.6 67 82.1
Potri.014G056600 Populus trichocarpa HOM05D005458 ORTHO05D005672 2.4e-14 81.6 64 79.7
Atru.chr4.1700 Acer truncatum HOM05D005458 ORTHO05D005672 4.2e-14 80.9 62 77.4
Manes.15G054000 Manihot esculenta HOM05D005458 ORTHO05D005672 7.1e-14 80.1 65 73.8
Haze_24813 Corylus avellana HOM05D005458 ORTHO05D005672 1.6e-13 79.0 60 76.7
Prupe.1G008500 Prunus persica HOM05D005458 ORTHO05D005672 2.7e-13 78.2 68 77.9
PGSC0003DMG400031295 Solanum tuberosum HOM05D005458 ORTHO05D005672 2.7e-13 78.2 62 79.0
Sc19g0007160 Simmondsia chinensis HOM05D005458 ORTHO05D005672 4.6e-13 77.4 66 71.2
CAN.G1635.9 Capsicum annuum HOM05D005458 ORTHO05D005672 6.0e-13 77.0 63 74.6
Glyma.18G164200 Glycine max HOM05D005458 ORTHO05D005672 7.9e-13 76.6 67 74.6
Lsat_1_v5_gn_6_60280 Lactuca sativa HOM05D005458 ORTHO05D005672 1.3e-12 75.9 66 74.2
Sc05g0002070 Simmondsia chinensis HOM05D005458 ORTHO05D005672 1.3e-12 75.9 66 74.2
ATR1145G024 Amborella trichopoda HOM05D005458 ORTHO05D005672 1.8e-12 75.5 64 75.0
ClCG06G007830 Citrullus lanatus HOM05D005458 ORTHO05D005672 2.3e-12 75.1 56 83.9
Migut.D02491 Erythranthe guttata HOM05D005458 ORTHO05D005672 2.3e-12 75.1 67 70.1
ECA248G3568 Erigeron canadensis HOM05D000609 ORTHO05D000462 3.0e-12 74.7 62 75.8
Lalb_Chr07g0194291 Lupinus albus HOM05D005458 ORTHO05D005672 3.0e-12 74.7 63 69.8
Prupe.8G201600 Prunus persica HOM05D005458 ORTHO05D005672 3.0e-12 74.7 62 74.2
Hund16751 Selenicereus undatus HOM05D005458 ORTHO05D005672 3.9e-12 74.3 62 74.2
Carub.0007s2961 Capsella rubella HOM05D005458 ORTHO05D005672 6.7e-12 73.6 60 71.7
Thhalv10026728m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 6.7e-12 73.6 60 71.7
Pp3c4_17970 Physcomitrium patens HOM05D005458 ORTHO05D005672 8.7e-12 73.2 65 70.8
GSVIVG01003386001 Vitis vinifera HOM05D005458 ORTHO05D005672 8.7e-12 73.2 63 73.0
PSO017G2416 Papaver somniferum HOM05D005458 ORTHO05D005672 1.1e-11 72.8 63 74.6
PSO063G0044 Papaver somniferum HOM05D005458 ORTHO05D005672 1.1e-11 72.8 63 74.6
Zm00001eb287790 Zea mays HOM05D005458 ORTHO05D005672 1.1e-11 72.8 65 69.2
Aqoxy2G03857 Aquilegia oxysepala HOM05D005458 ORTHO05D005672 1.5e-11 72.4 65 69.2
Cc03_g07880 Coffea canephora HOM05D005458 ORTHO05D005672 1.9e-11 72.0 53 84.9
Hma1.2p1_1407F.1_g281420 Hydrangea macrophylla HOM05D000434 ORTHO05D005672 1.9e-11 72.0 63 69.8
Eucgr.H00051 Eucalyptus grandis HOM05D005458 ORTHO05D005672 3.3e-11 71.2 64 68.8
Lalb_Chr19g0125681 Lupinus albus HOM05D005458 ORTHO05D005672 3.3e-11 71.2 67 76.1
Gohir.D07G207100 Gossypium hirsutum HOM05D005458 ORTHO05D005672 4.3e-11 70.9 49 81.6
Gorai.001G233500 Gossypium raimondii HOM05D005458 ORTHO05D005672 4.3e-11 70.9 49 81.6
MD05G1174200 Malus domestica HOM05D005458 ORTHO05D005672 5.6e-11 70.5 66 68.2
Nn1g07886 Nelumbo nucifera HOM05D005458 ORTHO05D005672 5.6e-11 70.5 66 72.7
Phvul.010G019201 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 5.6e-11 70.5 87 54.0
FvH4_4g16450 Fragaria vesca HOM05D005458 ORTHO05D005672 7.4e-11 70.1 64 70.3
Gohir.A07G157232 Gossypium hirsutum HOM05D005458 ORTHO05D005672 7.4e-11 70.1 50 80.0
VMungo1383G3675 Vigna mungo HOM05D005458 ORTHO05D000001 7.4e-11 70.1 63 71.4
Aa31LG9G4840 Aethionema arabicum HOM05D002547 ORTHO05D002649 9.6e-11 69.7 58 70.7
AT3G24100 Arabidopsis thaliana HOM05D005458 ORTHO05D005672 9.6e-11 69.7 51 84.3
Duzib211G0320 Durio zibethinus HOM05D005458 ORTHO05D005672 9.6e-11 69.7 49 79.6
Gorai.004G226200 Gossypium raimondii HOM05D005458 ORTHO05D005672 9.6e-11 69.7 59 72.9
Mapoly0075s0018 Marchantia polymorpha HOM05D005458 ORTHO05D005672 9.6e-11 69.7 66 66.7
Pp3c12_4180 Physcomitrium patens HOM05D005458 ORTHO05D005672 9.6e-11 69.7 67 68.7
Manes.12G045600 Manihot esculenta HOM05D005458 ORTHO05D005672 1.3e-10 69.3 56 75.0
arahy.Tifrunner.gnm1.ann1.XWTR79 Arachis hypogaea HOM05D005458 ORTHO05D005672 1.6e-10 68.9 47 85.1
FAN15G3619 Fragaria x ananassa HOM05D005458 ORTHO05D005672 1.6e-10 68.9 65 70.8
VMungo0331G1336 Vigna mungo HOM05D005458 ORTHO05D005672 1.6e-10 68.9 60 71.7
GSVIVG01021052001 Vitis vinifera HOM05D005458 ORTHO05D005672 1.6e-10 68.9 65 69.2
CiPaw.03G148500 Carya illinoinensis HOM05D005458 ORTHO05D005672 2.1e-10 68.6 63 66.7
Duzib133G0368 Durio zibethinus HOM05D005458 ORTHO05D005672 2.1e-10 68.6 49 79.6
Gohir.D07G163401 Gossypium hirsutum HOM05D005458 ORTHO05D005672 2.1e-10 68.6 49 79.6
Gorai.001G187200 Gossypium raimondii HOM05D005458 ORTHO05D005672 2.1e-10 68.6 49 79.6
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 3.7e-10 67.8 52 78.8
Carub.0003s2440 Capsella rubella HOM05D005458 ORTHO05D005672 4.8e-10 67.4 50 82.0
Pp3c13_10560 Physcomitrium patens HOM05D005458 ORTHO05D005672 4.8e-10 67.4 57 73.7
MELO3C020447.2 Cucumis melo HOM05D005458 ORTHO05D005672 6.2e-10 67.0 48 85.4
Cpa.g.sc2154.1 Carica papaya HOM05D005458 ORTHO05D005672 8.2e-10 66.6 58 75.9
Ah.13g078150 Amaranthus hybridus HOM05D002428 ORTHO05D000462 1.1e-09 66.2 60 71.7
ClCG09G008920 Citrullus lanatus HOM05D001590 ORTHO05D005672 1.1e-09 66.2 55 70.9
Rhsim02G0057300 Rhododendron simsii HOM05D005458 ORTHO05D005672 1.1e-09 66.2 57 73.7
AL3G39170 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 1.4e-09 65.9 49 81.6
Lsat_1_v5_gn_8_89780 Lactuca sativa HOM05D005458 ORTHO05D005672 1.4e-09 65.9 67 64.2
Os05g0407100 Oryza sativa ssp. japonica HOM05D005458 ORTHO05D005672 1.4e-09 65.9 57 70.2
EL10Ac3g07484 Beta vulgaris HOM05D005458 ORTHO05D005672 1.8e-09 65.5 64 68.8
Cpa.g.sc8.142 Carica papaya HOM05D005458 ORTHO05D005672 2.4e-09 65.1 49 75.5
Duzib138G0965 Durio zibethinus HOM05D005458 ORTHO05D005672 2.4e-09 65.1 49 75.5
PGR142G1434 Punica granatum HOM05D005458 ORTHO05D005672 3.1e-09 64.7 49 79.6
Hund27148 Selenicereus undatus HOM05D005458 ORTHO05D005672 3.1e-09 64.7 60 68.3
Potri.001G315400 Populus trichocarpa HOM05D005458 ORTHO05D005672 4.0e-09 64.3 49 79.6
CARHR100100 Cardamine hirsuta HOM05D005458 ORTHO05D005672 5.3e-09 63.9 49 79.6
DCAR_018640 Daucus carota HOM05D001184 ORTHO05D003397 5.3e-09 63.9 46 80.4
Peaxi162Scf00594g00523 Petunia axillaris HOM05D005458 ORTHO05D005672 5.3e-09 63.9 63 68.3
Thhalv10002785m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 9.0e-09 63.2 46 82.6
MD04G1009100 Malus domestica HOM05D005458 ORTHO05D005672 9.0e-09 63.2 57 68.4
CARHR219300 Cardamine hirsuta HOM05D005458 ORTHO05D005672 1.2e-08 62.8 50 76.0
Pp3c12_4160 Physcomitrium patens HOM05D005458 ORTHO05D005672 1.2e-08 62.8 57 64.9
unitig_736.g22466 Utricularia gibba HOM05D005458 ORTHO05D005672 1.5e-08 62.4 48 79.2
arahy.Tifrunner.gnm1.ann1.AN5TC9 Arachis hypogaea HOM05D005458 ORTHO05D005672 2.0e-08 62.0 48 75.0
AL7G42970 Arabidopsis lyrata HOM05D005458 ORTHO05D005672 4.5e-08 60.8 49 75.5
COL.COLO4_12105 Corchorus olitorius HOM05D001094 ORTHO05D001050 4.5e-08 60.8 43 81.4
AT4G13615 Arabidopsis thaliana HOM05D005458 ORTHO05D005672 5.8e-08 60.5 50 76.0
arahy.Tifrunner.gnm1.ann1.58ZGJB Arachis hypogaea HOM05D005458 ORTHO05D005672 5.8e-08 60.5 47 74.5
Thhalv10026730m.g Eutrema salsugineum HOM05D005458 ORTHO05D005672 5.8e-08 60.5 49 75.5
FAN07G0843 Fragaria x ananassa HOM05D005458 ORTHO05D005672 5.8e-08 60.5 59 67.8
THA.LOC104804811 Tarenaya hassleriana HOM05D005458 ORTHO05D005672 7.6e-08 60.1 64 65.6
A04p08570 Brassica napus HOM05D005458 ORTHO05D005672 1.3e-07 59.3 49 75.5
BolC4t25811H Brassica oleracea HOM05D005458 ORTHO05D005672 1.3e-07 59.3 49 75.5
BraA04t16551Z Brassica rapa HOM05D005458 ORTHO05D005672 1.3e-07 59.3 49 75.5
Gohir.A08G195125 Gossypium hirsutum HOM05D005458 ORTHO05D005672 1.7e-07 58.9 48 75.0
Lj3g0027829 Lotus japonicus HOM05D005458 ORTHO05D005672 1.7e-07 58.9 52 67.3
Manes.03G147401 Manihot esculenta HOM05D005458 ORTHO05D005672 2.2e-07 58.5 69 63.8
arahy.Tifrunner.gnm1.ann1.U1G5UA Arachis hypogaea HOM05D005458 ORTHO05D005672 3.8e-07 57.8 41 82.9
Migut.N00389 Erythranthe guttata HOM05D005458 ORTHO05D005672 3.8e-07 57.8 64 60.9
Psat4g203440 Pisum sativum HOM05D005458 ORTHO05D005672 3.8e-07 57.8 60 63.3
MELO3C021034.2 Cucumis melo HOM05D005458 ORTHO05D005672 4.9e-07 57.4 48 66.7
Aa31LG9G4030 Aethionema arabicum HOM05D005458 ORTHO05D005672 6.5e-07 57.0 45 77.8
EL10Ac1g00186 Beta vulgaris HOM05D005458 ORTHO05D005672 1.4e-06 55.8 46 71.7
BcaC02g09406 Brassica carinata HOM05D016886 ORTHO05D005672 1.4e-06 55.8 46 76.1
Medtr8g013640 Medicago truncatula HOM05D005458 ORTHO05D005672 1.4e-06 55.8 61 60.7
BcaB04g17662 Brassica carinata HOM05D005458 ORTHO05D005672 2.5e-06 55.1 46 73.9
Dinv27235 Davidia involucrata HOM05D005458 ORTHO05D005672 2.5e-06 55.1 56 67.9
Aa31LG8G10780 Aethionema arabicum HOM05D005458 ORTHO05D005672 5.5e-06 53.9 36 80.6
Cre06.g278238 Chlamydomonas reinhardtii HOM05D005458 ORTHO05D005672 5.5e-06 53.9 56 62.5


User provided reference genes

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