Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 2.1e-106 389.0 194 100.0
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 3.9e-89 331.6 195 85.1
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 4.3e-88 328.2 194 84.0
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 5.7e-88 327.8 195 84.1
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.7e-87 326.2 194 82.0
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 8.2e-87 323.9 194 83.5
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 8.5e-84 313.9 194 79.4
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 2.5e-83 312.4 195 82.1
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 4.2e-83 311.6 194 79.4
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 7.4e-80 300.8 193 75.1
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 4.8e-79 298.1 198 75.3
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 6.3e-79 297.7 198 75.3
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.5e-77 291.6 198 74.2
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 2.2e-76 289.3 192 73.4
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.1e-75 287.0 192 72.9
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 3.2e-75 285.4 195 72.3
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 2.1e-74 282.7 195 71.8
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 3.6e-74 282.0 198 69.7
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.8e-73 279.6 194 71.1
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.8e-73 279.6 194 71.1
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.0e-73 278.9 194 70.6
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 3.3e-72 275.4 193 69.9
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.3e-72 275.4 194 70.6
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 3.3e-72 275.4 198 73.2
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 4.4e-72 275.0 193 69.4
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 9.7e-72 273.9 201 68.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.2e-71 272.7 232 60.3
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.8e-71 272.3 199 67.3
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 6.3e-71 271.2 195 71.8
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.4e-70 270.0 195 69.2
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.8e-70 269.6 198 69.7
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.8e-70 269.6 193 69.4
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 2.4e-70 269.2 199 67.8
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 3.1e-70 268.9 194 68.6
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 3.1e-70 268.9 194 68.6
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 5.3e-70 268.1 194 68.0
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 7.0e-70 267.7 198 68.2
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 1.2e-69 266.9 199 69.3
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 2.0e-69 266.2 196 68.9
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 3.5e-69 265.4 207 65.7
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 4.5e-69 265.0 201 66.2
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.0e-68 263.8 198 68.2
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.0e-68 263.8 193 68.4
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 6.5e-68 261.2 204 65.7
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 8.5e-68 260.8 200 66.0
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.5e-67 260.0 202 64.9
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 1.9e-67 259.6 205 62.4
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 2.5e-67 259.2 196 66.3
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 3.2e-67 258.8 214 63.6
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 4.2e-67 258.5 211 62.1
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 5.5e-67 258.1 197 65.0
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.2e-66 256.9 199 63.8
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.6e-66 256.5 198 63.1
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 4.7e-66 255.0 199 63.3
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 4.7e-66 255.0 202 64.9
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 8.0e-66 254.2 197 64.5
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 8.0e-66 254.2 196 64.3
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.0e-65 253.8 197 64.0
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.0e-65 253.8 197 63.5
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 1.4e-65 253.4 197 64.0
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 6.8e-65 251.1 197 63.5
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 8.8e-65 250.8 203 64.5
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.5e-64 250.0 199 63.3
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.5e-64 250.0 199 63.3
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 5.7e-64 248.1 196 62.8
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 7.5e-64 247.7 207 60.4
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 9.8e-64 247.3 193 63.2
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.7e-63 246.5 200 62.0
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 2.2e-63 246.1 201 62.7
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 2.8e-63 245.7 192 65.6
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 3.7e-63 245.4 195 62.1
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 2.4e-62 242.7 192 62.5
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 3.1e-62 242.3 186 65.6
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 4.1e-62 241.9 195 62.1
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 9.1e-62 240.7 141 82.3
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.3e-60 236.9 220 57.3
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.2e-60 236.1 186 62.4
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 6.5e-60 234.6 188 62.2
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 2.5e-59 232.6 198 59.6
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 4.2e-59 231.9 197 59.9
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 7.2e-59 231.1 194 56.7
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 3.6e-58 228.8 194 56.2
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.3e-57 226.1 227 53.7
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.2e-56 223.8 193 54.4
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 1.2e-50 203.8 165 60.0
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.7e-50 201.8 134 68.7
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.0e-49 200.7 170 57.6
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.2e-48 197.2 209 56.0
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 5.4e-46 188.3 148 60.1
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 4.3e-43 178.7 202 49.0
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 9.5e-43 177.6 190 53.2
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.0e-41 174.1 179 54.7
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 3.2e-38 162.5 194 50.5
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 6.0e-37 158.3 149 61.1
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.7e-36 156.8 163 53.4
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.0e-32 143.3 133 55.6
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 7.5e-32 141.4 119 57.1
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.1e-27 127.5 106 57.5
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 1.9e-27 126.7 70 80.0
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 4.7e-26 122.1 119 51.3
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 1.5e-24 117.1 165 37.0
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 1.2e-21 107.5 97 61.9
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 4.6e-21 105.5 169 34.9
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.3e-19 99.0 83 61.4
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 9.6e-19 97.8 87 62.1
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.1e-18 96.7 56 76.8
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.8e-17 93.6 166 41.6
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 2.4e-14 83.2 50 68.0
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 4.6e-13 79.0 87 51.7
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 1.0e-12 77.8 45 84.4
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 4.8e-10 68.9 54 64.8
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 2.0e-08 63.5 45 57.8
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 5.8e-08 62.0 28 89.3
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 7.6e-08 61.6 59 62.7
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 4.9e-07 58.9 87 48.3


User provided reference genes

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