Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.7e-120 436.0 226 100.0
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 3.8e-83 312.0 192 83.9
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.1e-78 296.2 195 80.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 3.4e-76 288.9 192 76.0
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 9.3e-74 280.8 189 75.7
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.2e-73 280.4 182 80.8
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 1.7e-72 276.6 183 76.0
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 7.3e-71 271.2 192 71.9
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.4e-67 258.1 179 74.3
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 2.6e-60 236.1 129 91.5
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.0e-56 224.2 182 64.8
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 6.7e-56 221.5 178 62.9
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.5e-55 220.3 151 74.8
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 4.8e-54 215.3 146 74.7
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.4e-53 213.8 199 60.8
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 3.1e-53 212.6 181 64.6
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 5.3e-53 211.8 159 67.3
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 1.5e-52 210.3 171 62.0
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 1.3e-51 207.2 152 67.8
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 3.8e-51 205.7 180 60.6
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 8.4e-51 204.5 150 69.3
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 5.5e-50 201.8 184 59.8
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 5.5e-50 201.8 190 58.9
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 7.2e-50 201.4 171 64.3
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.2e-49 200.7 179 59.8
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.6e-49 200.3 171 62.6
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 2.1e-49 199.9 181 59.7
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 4.6e-49 198.7 182 59.3
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.3e-48 197.2 155 63.9
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.8e-48 196.8 171 61.4
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 2.3e-48 196.4 175 61.1
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.1e-47 194.1 171 58.5
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.1e-47 194.1 171 58.5
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 2.5e-47 193.0 179 58.7
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.3e-47 192.6 171 57.9
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 4.3e-47 192.2 157 62.4
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 9.7e-47 191.0 176 60.2
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 1.3e-46 190.7 175 58.3
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.3e-46 190.7 184 59.2
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.8e-46 189.5 179 58.7
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 4.8e-46 188.7 167 60.5
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.1e-45 187.6 160 61.2
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.4e-45 187.2 179 59.2
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.5e-44 183.7 154 63.0
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.5e-44 183.7 154 61.7
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 2.0e-44 183.3 190 55.3
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 1.3e-43 180.6 170 56.5
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 2.9e-43 179.5 151 62.9
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.9e-43 179.5 160 63.1
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 3.8e-43 179.1 151 62.9
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 5.0e-43 178.7 161 59.0
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 8.5e-43 177.9 187 52.4
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 1.9e-42 176.8 184 53.8
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.5e-42 176.4 184 56.5
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 3.2e-42 176.0 171 56.1
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 3.2e-42 176.0 178 55.1
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 4.2e-42 175.6 172 56.4
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 5.5e-42 175.3 158 62.7
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 7.2e-42 174.9 139 62.6
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.2e-41 174.1 179 53.1
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.2e-41 174.1 191 55.0
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 2.7e-41 172.9 151 59.6
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 3.6e-41 172.6 159 56.0
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 4.6e-41 172.2 147 61.9
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 4.6e-41 172.2 171 54.4
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 3.9e-40 169.1 176 54.0
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 6.7e-40 168.3 177 52.0
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 1.1e-39 167.5 172 54.1
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.1e-39 167.5 204 49.0
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 2.0e-39 166.8 179 51.4
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.0e-39 166.8 179 49.2
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 3.3e-39 166.0 147 59.9
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 4.3e-39 165.6 147 59.9
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 9.7e-39 164.5 169 50.3
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 9.7e-39 164.5 152 56.6
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.7e-38 163.7 171 51.5
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.7e-38 163.7 152 55.9
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.2e-38 163.3 180 49.4
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.2e-38 163.3 180 49.4
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 2.8e-38 162.9 137 61.3
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 4.8e-38 162.2 166 56.6
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 8.2e-38 161.4 157 52.2
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 8.2e-38 161.4 157 52.2
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 8.2e-38 161.4 139 61.2
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.1e-37 161.0 171 50.9
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.1e-37 161.0 157 52.2
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 1.1e-37 161.0 126 67.5
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.4e-37 160.6 161 53.4
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.8e-37 160.2 152 52.6
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 3.1e-37 159.5 157 51.6
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 3.1e-37 159.5 138 60.1
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 6.9e-37 158.3 183 54.1
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 9.1e-37 157.9 171 54.4
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 4.5e-36 155.6 157 51.0
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 4.5e-36 155.6 157 51.0
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 5.0e-35 152.1 141 59.6
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 8.5e-35 151.4 135 56.3
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 8.5e-35 151.4 185 48.1
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 2.5e-34 149.8 152 48.7
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 3.2e-34 149.4 120 61.7
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 4.2e-34 149.1 127 59.8
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 6.1e-33 145.2 154 57.1
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.7e-31 137.9 114 63.2
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.4e-29 134.0 163 49.7
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.1e-26 124.4 108 60.2
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 5.5e-26 122.1 119 50.4
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.1e-21 106.3 103 52.4
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 3.1e-21 106.3 80 63.8
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 2.7e-12 76.6 83 54.2
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 3.8e-11 72.8 128 33.6
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 1.1e-10 71.2 81 48.1
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.5e-10 70.9 136 38.2
TWI81G0948 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 5.7e-07 58.9 55 49.1


User provided reference genes

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