Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 1.7e-188 662.5 335 100.0
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 3.1e-126 455.7 321 76.9
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 4.2e-123 445.3 322 76.1
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 8.8e-121 437.6 318 75.5
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 9.7e-120 434.1 317 75.4
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 6.3e-111 404.8 331 68.9
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 1.3e-108 397.1 330 67.0
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 4.7e-98 362.1 330 61.8
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 3.0e-97 359.4 339 61.4
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 6.3e-95 351.7 324 61.7
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 2.3e-92 343.2 319 63.0
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 5.0e-92 342.0 329 59.3
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 6.4e-71 271.9 315 54.3
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 4.6e-69 265.8 325 50.8
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 1.3e-68 264.2 316 53.2
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 2.8e-66 256.5 334 48.5
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 8.1e-66 255.0 314 51.3
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 6.8e-65 251.9 316 51.3
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 3.4e-64 249.6 316 50.9
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 3.4e-64 249.6 316 51.3
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 7.6e-64 248.4 318 49.7
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 1.7e-63 247.3 330 47.9
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 1.7e-63 247.3 319 50.8
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 2.2e-63 246.9 322 47.5
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 8.4e-63 245.0 316 50.3
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 1.9e-62 243.8 340 47.4
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 7.1e-62 241.9 319 50.5
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 3.5e-61 239.6 337 47.5
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.3e-60 237.7 314 47.1
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.7e-60 237.3 316 49.1
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 2.3e-60 236.9 316 46.5
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 5.1e-60 235.7 330 47.6
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 5.1e-60 235.7 321 47.7
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 5.1e-60 235.7 327 48.0
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 6.6e-60 235.3 325 46.8
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 6.6e-60 235.3 314 47.1
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 1.9e-59 233.8 327 48.9
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 4.3e-59 232.6 322 45.0
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 2.1e-58 230.3 325 44.9
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 6.2e-58 228.8 317 46.7
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 8.1e-58 228.4 316 47.2
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 1.8e-57 227.3 331 43.2
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 6.9e-57 225.3 315 48.3
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 1.5e-56 224.2 316 47.8
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 2.0e-56 223.8 315 46.3
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 3.4e-56 223.0 323 44.0
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 1.3e-55 221.1 304 47.0
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 3.8e-55 219.5 316 47.2
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 1.9e-54 217.2 314 41.1
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 5.4e-54 215.7 317 46.1
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 7.1e-54 215.3 316 44.3
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 1.3e-52 211.1 323 45.5
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 5.1e-52 209.1 335 44.5
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 5.1e-52 209.1 325 42.5
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 8.7e-52 208.4 310 44.8
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 1.5e-51 207.6 329 44.4
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.9e-51 207.2 323 44.0
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 1.6e-50 204.1 323 44.6
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 1.1e-49 201.4 322 43.2
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.4e-49 201.1 326 42.9
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.4e-49 201.1 321 45.2
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.4e-49 200.3 296 46.3
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.0e-49 199.5 323 42.1
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 4.0e-49 199.5 314 45.9
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 9.0e-49 198.4 312 43.9
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.5e-48 197.6 317 42.3
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.5e-48 197.6 326 41.7
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 1.5e-48 197.6 320 43.1
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 1.5e-48 197.6 321 43.3
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 2.6e-48 196.8 321 43.6
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 2.6e-48 196.8 317 42.3
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 1.7e-47 194.1 318 41.8
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 2.9e-47 193.4 316 42.1
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 2.9e-47 193.4 315 42.2
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 3.8e-47 193.0 325 43.1
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 3.8e-47 193.0 312 42.0
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 6.4e-47 192.2 327 41.3
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 6.4e-47 192.2 338 39.6
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 8.4e-47 191.8 317 41.6
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 1.4e-46 191.0 318 44.7
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 1.9e-46 190.7 316 40.5
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 1.9e-46 190.7 318 44.0
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 5.4e-46 189.1 323 40.6
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 7.9e-45 185.3 324 39.8
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.3e-44 184.5 319 40.4
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 3.0e-44 183.3 313 43.1
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 1.5e-43 181.0 324 40.7
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 5.6e-43 179.1 314 41.4
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 1.1e-41 174.9 298 39.3
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 1.4e-41 174.5 300 40.3
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.2e-40 171.4 411 35.0
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 2.9e-39 166.8 313 39.6
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.4e-38 164.5 303 39.6
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 3.2e-38 163.3 260 41.2
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 9.3e-38 161.8 319 36.4
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 7.9e-37 158.7 291 39.5
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 1.3e-36 157.9 276 41.3
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.3e-35 152.9 272 43.0
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 7.4e-35 152.1 185 51.4
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 8.2e-34 148.7 187 52.9
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 1.1e-33 148.3 321 36.4
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 7.1e-30 135.6 272 37.5
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 6.0e-29 132.5 184 48.4
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 1.0e-28 131.7 255 41.2
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 1.5e-27 127.9 260 40.4
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 1.6e-26 124.4 296 34.8
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 9.0e-25 118.6 199 42.7
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 7.6e-24 115.5 178 45.5
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 3.2e-22 110.2 206 39.3
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 3.2e-22 110.2 163 44.2
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 8.8e-20 102.1 94 57.4
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 4.1e-17 93.2 139 41.0
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 6.9e-17 92.4 170 40.0
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 2.0e-16 90.9 154 41.6
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.2e-14 83.6 159 40.3
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 7.2e-14 82.4 165 35.2
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 1.6e-13 81.3 345 28.1
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 2.1e-13 80.9 331 28.1
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 1.4e-12 78.2 115 41.7
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 1.8e-12 77.8 259 29.7
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 4.4e-11 73.2 308 27.6
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 3.7e-10 70.1 285 28.1
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 1.8e-09 67.8 164 29.3
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 6.5e-07 59.3 149 34.2


User provided reference genes

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