Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 5.4e-69 264.2 136 100.0
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 4.4e-63 244.6 136 92.6
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 5.1e-59 231.1 136 87.5
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 4.9e-54 214.5 136 82.4
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 6.4e-54 214.2 136 82.4
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 5.8e-47 191.0 124 80.6
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.9e-45 186.0 133 71.4
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 3.2e-45 185.3 134 70.9
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 7.1e-45 184.1 133 72.9
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.6e-44 183.0 133 72.2
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.1e-44 182.6 133 72.2
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.7e-44 182.2 133 71.4
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.5e-44 181.8 133 72.2
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 3.5e-44 181.8 135 71.9
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 1.5e-42 176.4 136 71.3
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 1.9e-42 176.0 121 78.5
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 9.6e-42 173.7 133 68.4
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 2.1e-41 172.6 133 68.4
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 4.8e-41 171.4 132 65.9
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 8.1e-41 170.6 133 66.9
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 1.4e-40 169.9 133 65.4
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 1.8e-40 169.5 136 64.7
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 3.1e-40 168.7 131 67.2
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 3.1e-40 168.7 131 67.2
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 9.0e-40 167.2 134 65.7
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 9.0e-40 167.2 133 65.4
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.6e-39 165.6 133 62.4
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.6e-39 165.6 133 62.4
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 2.6e-39 165.6 132 64.4
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 4.5e-39 164.9 133 62.4
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 4.5e-39 164.9 133 62.4
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 4.5e-39 164.9 130 65.4
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 5.8e-39 164.5 133 62.4
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 5.8e-39 164.5 130 63.8
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 7.6e-39 164.1 133 63.2
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.3e-38 163.3 133 65.4
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 2.2e-38 162.5 133 60.2
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 2.2e-38 162.5 133 60.2
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 4.9e-38 161.4 141 60.3
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 4.9e-38 161.4 133 60.2
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 4.9e-38 161.4 133 63.9
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 8.4e-38 160.6 133 63.2
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 8.4e-38 160.6 133 62.4
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 1.1e-37 160.2 133 60.9
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 1.4e-37 159.8 133 60.2
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 1.9e-37 159.5 126 65.1
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.9e-37 159.5 133 59.4
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 2.4e-37 159.1 121 68.6
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 3.2e-37 158.7 136 59.6
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 5.5e-37 157.9 133 60.9
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 5.5e-37 157.9 131 64.9
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.5e-37 157.9 135 60.7
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.5e-37 157.9 135 60.7
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.2e-36 156.8 122 65.6
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 2.1e-36 156.0 134 59.7
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 2.1e-36 156.0 134 59.7
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 2.7e-36 155.6 133 57.9
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 3.5e-36 155.2 134 62.7
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 4.6e-36 154.8 137 57.7
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 7.9e-36 154.1 133 57.1
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 1.3e-35 153.3 135 61.5
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 1.8e-35 152.9 136 56.6
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 3.0e-35 152.1 132 59.1
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 8.7e-35 150.6 134 57.5
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 1.1e-34 150.2 133 59.4
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.1e-34 150.2 115 69.6
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 1.1e-34 150.2 133 60.2
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 1.9e-34 149.4 134 59.0
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 1.9e-34 149.4 120 65.0
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 2.5e-34 149.1 121 66.1
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 9.6e-34 147.1 121 66.1
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 9.6e-34 147.1 135 58.5
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 9.6e-34 147.1 134 56.0
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 2.1e-33 146.0 133 58.6
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 2.1e-33 146.0 118 65.3
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 2.1e-33 146.0 127 59.1
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 3.7e-33 145.2 116 63.8
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 8.2e-33 144.1 130 61.5
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 1.8e-32 142.9 115 61.7
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 9.0e-32 140.6 116 61.2
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.5e-31 139.8 113 63.7
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 2.0e-31 139.4 132 53.8
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 1.0e-30 137.1 135 52.6
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 2.2e-30 136.0 115 60.0
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 6.5e-30 134.4 137 51.8
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 8.4e-30 134.0 131 55.0
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 4.2e-29 131.7 131 54.2
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 1.6e-28 129.8 104 64.4
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.1e-28 129.4 130 55.4
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 8.7e-27 124.0 131 52.7
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 7.4e-26 120.9 106 64.2
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.3e-25 120.2 106 59.4
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 2.2e-25 119.4 137 48.9
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 3.7e-25 118.6 126 54.0
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 2.6e-23 112.5 131 46.6
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.7e-22 109.8 125 50.4
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 1.7e-22 109.8 132 47.7
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 2.1e-20 102.8 131 40.5
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 6.7e-19 97.8 116 48.3
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 8.2e-17 90.9 127 41.7
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.4e-08 63.5 52 63.5


User provided reference genes

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