Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 1.7e-134 482.6 238 100.0
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 4.2e-85 318.5 165 90.3
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 1.6e-84 316.6 256 65.2
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 4.0e-83 312.0 165 87.9
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 4.8e-81 305.1 228 67.1
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 9.1e-80 300.8 163 84.0
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 2.7e-79 299.3 163 82.8
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 5.9e-79 298.1 210 69.0
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 2.2e-78 296.2 163 82.8
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 2.2e-78 296.2 225 64.9
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 2.9e-78 295.8 210 69.0
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 5.0e-78 295.0 163 81.0
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 1.1e-77 293.9 212 68.9
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 1.9e-77 293.1 226 65.0
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 1.2e-76 290.4 162 80.2
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 1.2e-76 290.4 162 80.2
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 2.7e-76 289.3 204 68.6
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 4.7e-76 288.5 226 63.3
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 8.0e-76 287.7 162 79.6
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 1.0e-75 287.3 208 67.3
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 1.4e-75 287.0 165 81.8
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 2.3e-75 286.2 212 65.1
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 3.0e-75 285.8 212 65.1
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 4.0e-75 285.4 162 77.8
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 4.0e-75 285.4 162 77.8
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 6.8e-75 284.6 162 79.0
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 6.8e-75 284.6 162 77.8
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 8.8e-75 284.3 162 79.0
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 1.2e-74 283.9 212 63.2
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 1.5e-74 283.5 162 78.4
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 1.5e-74 283.5 163 79.1
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 2.6e-74 282.7 161 79.5
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 2.6e-74 282.7 162 78.4
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 3.4e-74 282.3 162 77.2
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 3.4e-74 282.3 163 78.5
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 3.4e-74 282.3 162 78.4
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 4.4e-74 282.0 162 77.8
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 9.8e-74 280.8 163 77.3
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 9.8e-74 280.8 162 76.5
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 3.7e-73 278.9 232 58.2
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 8.3e-73 277.7 212 63.2
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 8.3e-73 277.7 163 76.7
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 1.1e-72 277.3 223 62.3
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 1.1e-72 277.3 161 77.6
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 1.4e-72 276.9 162 77.8
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 4.1e-72 275.4 163 77.9
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 4.1e-72 275.4 163 77.9
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 4.1e-72 275.4 164 76.8
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 4.1e-72 275.4 162 77.8
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 5.4e-72 275.0 163 76.7
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 5.4e-72 275.0 163 77.9
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 7.0e-72 274.6 162 75.9
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 9.1e-72 274.2 163 77.9
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 9.1e-72 274.2 163 77.9
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 9.1e-72 274.2 212 60.8
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 1.2e-71 273.9 163 76.1
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 2.0e-71 273.1 162 75.9
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 4.5e-71 271.9 162 75.3
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 1.7e-70 270.0 162 75.9
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 2.3e-70 269.6 163 75.5
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 2.3e-70 269.6 162 74.7
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 6.6e-70 268.1 159 78.0
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 1.1e-69 267.3 163 74.2
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 7.2e-69 264.6 163 71.2
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 7.2e-69 264.6 162 73.5
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 9.5e-69 264.2 162 72.2
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 9.5e-69 264.2 223 59.2
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 2.8e-68 262.7 161 72.0
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 3.6e-68 262.3 162 72.8
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 3.6e-68 262.3 164 74.4
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 6.1e-68 261.5 162 71.0
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 8.0e-68 261.2 162 71.6
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 2.3e-67 259.6 162 74.1
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 4.0e-67 258.8 164 73.8
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 5.2e-67 258.5 163 70.6
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 6.8e-67 258.1 164 73.2
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 8.9e-67 257.7 164 73.2
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 8.9e-67 257.7 162 69.8
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 1.5e-66 256.9 162 71.0
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 1.5e-66 256.9 228 55.7
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 1.5e-66 256.9 163 72.4
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 2.0e-66 256.5 147 77.6
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 2.6e-66 256.1 164 73.2
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 3.4e-66 255.8 164 72.0
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 5.7e-66 255.0 164 72.0
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 5.7e-66 255.0 163 71.8
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 5.7e-66 255.0 164 70.1
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 7.5e-66 254.6 164 69.5
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 9.8e-66 254.2 162 70.4
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 9.8e-66 254.2 164 70.1
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 1.3e-65 253.8 186 65.1
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 4.9e-65 251.9 164 70.1
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 1.4e-64 250.4 161 69.6
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 7.0e-64 248.1 196 60.2
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 4.5e-63 245.4 161 69.6
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 7.8e-63 244.6 211 55.5
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 3.6e-60 235.7 163 69.3
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 7.8e-55 218.0 212 53.8
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 7.8e-55 218.0 164 62.8
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 1.7e-54 216.9 162 62.3
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 1.7e-54 216.9 173 58.4
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 1.6e-52 210.3 120 74.2
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 1.5e-50 203.8 173 54.9
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 3.0e-46 189.5 166 54.8
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 3.0e-46 189.5 152 60.5
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 3.3e-45 186.0 173 51.4
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 6.8e-43 178.3 165 52.1
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 7.6e-34 148.3 95 69.5
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 1.0e-22 111.3 68 75.0
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 2.5e-21 106.7 68 73.5
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 4.3e-21 105.9 171 35.7
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 7.3e-21 105.1 162 36.4
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.2e-16 89.7 60 70.0
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.6e-15 87.4 62 61.3
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.4e-11 74.3 51 64.7
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 5.8e-10 68.9 41 80.5
arahy.Tifrunner.gnm1.ann1.Y3IZ58 Arachis hypogaea HOM05D006376 ORTHO05D008046 5.8e-10 68.9 41 80.5
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 7.6e-10 68.6 41 80.5
arahy.Tifrunner.gnm1.ann1.VLX8JM Arachis hypogaea HOM05D006376 ORTHO05D008046 7.6e-10 68.6 41 78.0
arahy.Tifrunner.gnm1.ann1.W819WZ Arachis hypogaea HOM05D006376 ORTHO05D008046 2.2e-09 67.0 41 78.0
Dinv17636 Davidia involucrata HOM05D012663 ORTHO05D004533 2.2e-09 67.0 46 71.7


User provided reference genes

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