Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 8.0e-216 753.4 370 100.0
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 4.3e-201 704.5 370 93.2
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 1.5e-198 696.0 370 92.7
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 5.8e-190 667.5 370 88.9
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 2.7e-187 658.7 373 87.1
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 9.9e-182 640.2 370 83.8
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.1e-179 632.5 371 83.8
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 6.6e-178 627.5 371 82.5
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 8.9e-175 617.1 371 82.2
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 6.4e-173 610.9 367 81.2
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 5.4e-156 554.7 371 72.5
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.3e-154 550.1 371 70.9
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 3.0e-154 548.9 370 69.7
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 7.4e-153 544.3 371 70.6
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.4e-151 540.0 367 70.6
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.1e-151 538.9 382 67.5
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 6.9e-151 537.7 370 69.5
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.5e-150 536.6 367 69.8
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.6e-150 535.8 368 69.8
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 2.2e-149 532.7 375 69.1
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 6.5e-149 531.2 371 67.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.1e-148 530.4 370 67.3
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.4e-148 530.0 373 68.4
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 1.9e-148 529.6 370 69.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.9e-148 529.6 370 68.6
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 3.2e-148 528.9 372 67.7
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.2e-148 528.9 369 68.0
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 7.1e-148 527.7 370 67.6
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 2.1e-147 526.2 370 67.3
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 2.7e-147 525.8 374 66.3
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.7e-147 525.8 371 66.8
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.5e-147 525.4 373 69.7
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 4.6e-147 525.0 369 68.6
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 6.0e-147 524.6 368 68.2
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.0e-146 523.9 370 67.6
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.3e-146 523.5 371 68.2
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 2.5e-145 519.2 371 69.5
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 9.6e-145 517.3 370 66.8
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.8e-144 515.8 370 66.2
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 8.2e-144 514.2 370 66.2
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.4e-143 512.7 370 66.5
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 3.1e-143 512.3 371 65.2
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 3.1e-143 512.3 371 65.8
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 4.0e-143 511.9 380 66.1
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 6.9e-143 511.1 374 67.1
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.5e-142 510.0 380 65.8
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 2.6e-142 509.2 378 66.1
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 2.6e-142 509.2 378 66.4
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 3.4e-142 508.8 371 66.0
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 5.8e-142 508.1 380 65.3
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.3e-141 506.9 373 64.9
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.2e-141 506.1 371 65.5
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 6.5e-141 504.6 378 66.1
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 3.0e-138 495.7 370 63.2
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 1.3e-136 490.3 374 65.5
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 3.7e-136 488.8 404 60.4
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 4.8e-136 488.4 368 65.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 4.8e-136 488.4 294 81.0
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.4e-135 486.9 377 64.7
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 2.4e-135 486.1 369 65.0
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 6.9e-135 484.6 377 64.5
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 6.9e-135 484.6 377 64.5
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.2e-134 483.8 377 64.2
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 7.7e-134 481.1 372 62.6
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 2.2e-133 479.6 371 62.3
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 7.2e-132 474.6 333 67.6
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 9.4e-132 474.2 361 63.4
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.6e-131 473.4 369 61.8
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 2.7e-131 472.6 414 58.9
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.4e-130 470.3 380 59.7
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 2.3e-130 469.5 373 61.9
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 8.8e-130 467.6 369 61.2
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.3e-129 465.3 367 62.1
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 9.1e-127 457.6 365 60.3
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 7.7e-126 454.5 420 56.4
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 1.6e-123 446.8 377 59.7
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 3.9e-122 442.2 408 56.4
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.7e-120 436.8 311 67.8
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 7.0e-119 431.4 342 63.7
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 7.7e-118 427.9 372 57.5
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.7e-118 427.9 295 68.1
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.0e-117 427.6 396 55.1
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 2.6e-113 412.9 286 67.1
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 1.4e-111 407.1 371 54.2
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.1e-107 393.3 305 61.6
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 2.0e-105 386.7 284 63.4
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.6e-94 350.5 314 54.1
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 2.8e-91 339.7 251 66.5
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 7.5e-89 331.6 229 69.0
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.1e-83 313.5 293 53.2
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 3.4e-81 306.2 217 66.8
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.6e-78 297.4 251 60.2
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 2.7e-78 296.6 383 44.4
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.2e-75 287.7 216 64.8
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 3.9e-69 266.2 215 61.9
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.6e-67 260.8 149 85.9
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 2.4e-63 246.9 374 37.4
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 2.8e-59 233.4 201 58.7
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.0e-53 214.9 158 67.1
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.6e-45 185.7 141 60.3
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 3.6e-43 179.9 392 32.4
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 9.3e-39 165.2 145 58.6
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.1e-34 151.8 156 49.4
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 5.5e-31 139.4 71 94.4
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.7e-29 132.5 74 82.4
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-22 111.7 75 65.3
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 6.1e-22 109.4 75 68.0
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 1.1e-20 105.1 391 28.1
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 7.4e-20 102.4 359 27.9
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 7.4e-20 102.4 386 26.4
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.8e-18 97.8 80 56.2
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 6.9e-18 95.9 387 26.6
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.3e-16 91.7 67 68.7
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.7e-11 74.7 110 36.4
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 3.1e-10 70.5 64 45.3
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 5.9e-09 66.2 37 81.1
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.9e-07 61.2 68 45.6
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 5.5e-07 59.7 37 73.0


User provided reference genes

Program Settings