Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 0.0e+00 1146.7 590 100.0
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 3.4e-309 1064.3 590 89.3
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 3.4e-309 1064.3 593 88.5
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 3.1e-302 1041.2 595 88.1
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 1.3e-297 1025.8 592 86.1
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 8.1e-295 1016.5 592 85.8
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 3.2e-291 1004.6 591 85.1
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 3.0e-289 998.0 598 84.9
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 2.2e-284 981.9 590 85.1
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 8.4e-284 979.9 570 84.6
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 1.8e-278 962.2 595 80.5
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 1.4e-275 952.6 599 79.6
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 4.6e-274 947.6 610 78.7
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 9.6e-272 939.9 590 78.6
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 1.5e-269 932.6 567 80.8
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.0e-269 932.2 567 79.9
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 4.5e-269 931.0 594 77.3
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 4.5e-269 931.0 596 77.3
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.9e-267 925.6 567 79.4
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 2.4e-267 925.2 592 77.4
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 5.5e-267 924.1 567 79.2
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.2e-266 922.9 567 78.5
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.2e-266 922.9 567 78.5
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 4.6e-266 921.0 567 78.5
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 5.1e-265 917.5 594 76.9
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 7.4e-264 913.7 591 77.0
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 2.8e-263 911.8 600 75.2
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 1.4e-262 909.4 591 76.3
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 1.8e-262 909.1 572 76.6
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.4e-262 908.7 566 78.1
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 4.0e-262 907.9 570 77.4
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 9.0e-262 906.7 598 75.4
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 3.4e-261 904.8 583 77.0
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 3.4e-261 904.8 565 76.8
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 7.6e-261 903.7 567 77.2
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 1.7e-260 902.5 567 76.7
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 2.2e-260 902.1 573 77.1
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 3.8e-260 901.4 569 77.5
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 8.4e-260 900.2 577 76.1
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.1e-259 899.8 597 75.4
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 1.9e-259 899.0 577 76.8
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 1.9e-259 899.0 597 74.0
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 3.2e-259 898.3 597 74.0
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 7.1e-259 897.1 571 77.2
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 7.1e-259 897.1 590 75.3
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 9.3e-259 896.7 594 74.1
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 1.6e-258 896.0 567 77.2
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 3.5e-258 894.8 579 75.5
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 2.3e-257 892.1 567 78.8
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 3.0e-257 891.7 596 73.8
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 3.9e-257 891.3 597 74.5
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 5.1e-257 891.0 599 73.3
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 6.7e-257 890.6 584 74.1
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 8.7e-257 890.2 602 72.9
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 1.1e-256 889.8 597 73.9
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 1.5e-256 889.4 592 75.5
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.5e-256 889.4 596 73.3
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 1.9e-256 889.0 604 73.0
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 1.9e-256 889.0 608 71.9
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 2.5e-256 888.6 599 73.1
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 2.5e-256 888.6 600 73.2
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.3e-256 888.3 597 73.7
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 2.1e-255 885.6 600 73.2
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 4.8e-255 884.4 570 76.1
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 4.8e-255 884.4 616 71.8
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 4.8e-255 884.4 606 73.9
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 6.3e-255 884.0 580 75.2
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 8.2e-255 883.6 616 71.6
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 8.2e-255 883.6 566 77.0
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.4e-254 882.9 616 71.6
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.8e-254 882.5 598 72.1
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 1.8e-254 882.5 605 71.4
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 5.3e-254 880.9 602 72.6
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 9.0e-254 880.2 600 73.2
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.2e-253 879.8 616 71.4
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 1.5e-253 879.4 597 73.2
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 1.5e-253 879.4 696 65.8
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 4.5e-253 877.9 598 72.2
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 1.3e-252 876.3 599 72.6
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.2e-252 875.5 594 71.5
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 6.5e-252 874.0 574 74.6
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 6.5e-252 874.0 573 76.3
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 8.4e-252 873.6 614 70.8
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 8.4e-252 873.6 614 70.8
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.1e-251 873.2 590 73.6
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 1.1e-251 873.2 601 72.9
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 1.4e-251 872.8 584 75.0
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 1.9e-251 872.5 567 75.0
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 1.9e-251 872.5 582 74.7
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 2.5e-251 872.1 568 73.6
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 2.5e-251 872.1 569 74.7
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 3.2e-251 871.7 571 74.6
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 1.6e-250 869.4 607 72.0
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 2.7e-250 868.6 599 71.8
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 2.7e-250 868.6 598 71.2
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 3.5e-250 868.2 598 71.2
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 6.1e-250 867.5 597 71.2
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 1.0e-249 866.7 588 72.8
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 2.3e-249 865.5 584 71.9
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.0e-249 865.1 597 71.0
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 3.0e-249 865.1 598 70.4
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 3.9e-249 864.8 599 71.1
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 2.5e-248 862.1 545 76.5
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 7.4e-248 860.5 569 72.6
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.3e-247 859.8 597 70.4
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 3.7e-247 858.2 570 72.3
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 4.8e-247 857.8 570 72.3
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 6.3e-247 857.4 598 70.4
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 3.1e-246 855.1 598 69.7
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 3.1e-246 855.1 597 69.8
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 4.1e-246 854.7 545 77.8
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 1.5e-245 852.8 600 70.2
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 2.2e-244 849.0 597 69.8
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 3.6e-242 841.6 595 71.6
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 5.1e-241 837.8 576 72.6
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 1.5e-240 836.3 598 71.4
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 6.3e-239 830.9 527 78.0
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 3.8e-236 821.6 519 77.1
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 6.1e-234 814.3 603 68.5
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 1.1e-232 810.1 635 67.4
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 1.4e-230 803.1 578 68.0
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 4.1e-230 801.6 496 81.9
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 1.9e-227 792.7 562 67.3
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 4.7e-226 788.1 928 49.4
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.3e-220 770.0 891 49.3
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 8.3e-207 724.2 592 62.0
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 1.3e-199 700.3 567 63.3
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 7.0e-198 694.5 566 63.3
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 1.2e-197 693.7 535 66.7
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 3.7e-191 672.2 380 85.8
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 1.1e-190 670.6 560 59.8
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 1.9e-179 633.3 460 66.3
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 6.4e-175 618.2 340 88.8
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.4e-161 573.9 432 68.5
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 7.9e-157 558.1 420 69.8
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 4.8e-146 522.3 565 47.1
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 4.5e-144 515.8 307 82.7
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.5e-128 464.2 443 59.8
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 7.2e-118 428.7 350 58.0
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 6.8e-100 369.0 372 47.8
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 9.1e-97 358.6 485 41.4
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 1.3e-95 354.8 526 38.0
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 4.7e-85 319.7 188 83.5
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 3.4e-75 287.0 377 42.2
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 3.0e-71 273.9 236 66.5
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 3.0e-71 273.9 236 66.5
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 3.9e-71 273.5 236 56.8
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 9.5e-70 268.9 220 62.3
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 9.5e-70 268.9 229 60.7
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 5.4e-65 253.1 159 74.8
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.7e-63 248.1 363 35.3
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.2e-61 241.9 195 61.0
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.9e-49 201.4 223 50.7
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 5.6e-46 189.9 109 87.2
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 2.4e-41 174.5 227 52.0
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 5.8e-27 126.7 72 84.7
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 8.4e-26 122.9 152 46.1
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 8.4e-26 122.9 152 46.1
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 4.5e-19 100.5 105 57.1
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 1.0e-15 89.4 42 92.9
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 7.4e-14 83.2 49 69.4
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 7.4e-14 83.2 49 69.4
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 1.4e-12 79.0 48 68.8
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 9.1e-12 76.3 43 72.1
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 1.0e-07 62.8 72 47.2


User provided reference genes

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