Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_17010_v3 Cicer arietinum L. HOM05D003347 ORTHO05D003821 1.5e-36 156.8 173 100.0
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 5.2e-24 115.2 151 74.2
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 1.7e-19 100.1 152 67.1
arahy.Tifrunner.gnm1.ann1.0YHR6E Arachis hypogaea HOM05D003347 ORTHO05D003821 2.6e-15 86.3 152 81.6
arahy.Tifrunner.gnm1.ann1.3X6E38 Arachis hypogaea HOM05D003347 ORTHO05D003821 2.6e-15 86.3 152 81.6
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 4.4e-15 85.5 150 59.3
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.8e-13 80.1 152 59.9
Medtr3g097170 Medicago truncatula HOM05D003347 ORTHO05D003821 5.4e-13 78.6 151 82.8
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 1.6e-12 77.0 98 63.3
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 4.5e-12 75.5 85 56.5
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.5e-12 75.5 151 45.0
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 3.2e-10 69.3 152 61.8
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 4.2e-10 68.9 90 87.8
Glyma.04G206600 Glycine max HOM05D003347 ORTHO05D003821 1.2e-09 67.4 152 76.3
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 3.6e-09 65.9 152 59.9
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 8.0e-09 64.7 151 57.6
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 1.0e-08 64.3 96 80.2
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 4.0e-08 62.4 97 52.6
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.2e-07 60.8 81 51.9
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.2e-07 60.8 81 51.9
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 4.4e-07 58.9 88 50.0
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 7.5e-07 58.2 98 52.0
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 1.3e-06 57.4 152 55.9
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 1.7e-06 57.0 80 48.8
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 2.2e-06 56.6 152 55.3
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 2.8e-06 56.2 91 71.4
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.8e-06 56.2 152 41.4
arahy.Tifrunner.gnm1.ann1.AG1RTL Arachis hypogaea HOM05D003347 ORTHO05D003821 4.9e-06 55.5 103 61.2
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 4.9e-06 55.5 144 56.2
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 6.3e-06 55.1 152 65.8


User provided reference genes

Program Settings