Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.5e-179 632.9 355 100.0
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.5e-179 632.9 355 100.0
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 1.1e-92 344.4 350 64.0
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 2.0e-86 323.6 328 66.2
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 2.7e-75 286.6 252 63.1
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 8.5e-74 281.6 254 62.2
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 4.2e-73 279.3 355 52.4
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 4.0e-71 272.7 308 59.7
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 9.8e-70 268.1 349 54.7
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 1.3e-69 267.7 254 59.4
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 4.8e-69 265.8 273 54.9
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.6e-67 260.8 262 56.1
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 2.0e-67 260.4 267 55.1
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 2.7e-67 260.0 261 56.3
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 3.5e-67 259.6 261 56.7
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 4.5e-67 259.2 359 49.3
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 4.5e-67 259.2 253 57.7
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 5.9e-67 258.8 266 54.1
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 5.9e-67 258.8 266 55.6
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 7.7e-67 258.5 267 54.3
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 7.7e-67 258.5 357 48.7
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 7.7e-67 258.5 260 55.0
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 7.7e-67 258.5 266 54.1
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 7.7e-67 258.5 271 55.7
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 7.7e-67 258.5 256 56.6
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 1.0e-66 258.1 266 54.5
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 1.7e-66 257.3 267 54.7
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 2.9e-66 256.5 268 56.7
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.9e-66 256.5 262 55.0
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 3.8e-66 256.1 267 53.9
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 5.0e-66 255.8 267 53.6
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 5.0e-66 255.8 262 55.0
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 5.0e-66 255.8 261 55.9
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 5.0e-66 255.8 271 55.4
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 6.6e-66 255.4 267 53.9
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 1.1e-65 254.6 262 55.0
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 1.1e-65 254.6 271 55.4
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 1.5e-65 254.2 359 48.7
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 1.5e-65 254.2 262 54.2
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.9e-65 253.8 263 55.5
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 1.9e-65 253.8 263 55.5
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 3.3e-65 253.1 253 56.5
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 4.2e-65 252.7 261 56.3
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 9.5e-65 251.5 269 53.2
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 9.5e-65 251.5 275 54.2
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 2.8e-64 250.0 252 55.6
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 3.6e-64 249.6 253 56.1
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 4.7e-64 249.2 272 53.7
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 8.0e-64 248.4 251 55.4
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 1.0e-63 248.1 273 52.7
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 1.0e-63 248.1 253 54.2
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 1.4e-63 247.7 265 52.5
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 1.4e-63 247.7 274 52.2
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 1.8e-63 247.3 261 53.6
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 2.3e-63 246.9 254 55.5
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 4.0e-63 246.1 258 54.7
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 4.0e-63 246.1 270 55.2
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 1.2e-62 244.6 274 51.8
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 1.5e-62 244.2 258 53.1
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.0e-62 243.8 256 55.1
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 3.4e-62 243.0 323 46.1
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 9.8e-62 241.5 262 51.5
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 1.7e-61 240.7 254 52.8
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.8e-61 240.0 264 50.0
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 3.7e-61 239.6 247 55.9
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 3.7e-61 239.6 264 53.0
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 6.3e-61 238.8 269 48.7
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 1.1e-60 238.0 250 52.8
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 4.1e-60 236.1 249 53.0
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 4.1e-60 236.1 294 49.0
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 3.5e-59 233.0 252 52.8
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 1.0e-58 231.5 270 49.3
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 3.9e-58 229.6 258 52.3
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 2.5e-57 226.9 252 51.2
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 3.3e-57 226.5 239 54.0
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 3.3e-57 226.5 362 46.4
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 9.5e-57 224.9 236 55.1
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 2.8e-56 223.4 244 52.0
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 3.6e-56 223.0 269 47.6
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 1.0e-55 221.5 264 48.9
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 1.0e-55 221.5 263 48.3
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 3.1e-55 219.9 312 52.9
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 4.0e-55 219.5 258 50.0
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 7.5e-54 215.3 344 40.7
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 9.8e-54 214.9 220 56.8
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 8.3e-53 211.8 262 47.7
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 1.4e-52 211.1 241 50.2
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 4.6e-51 206.1 226 54.9
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 6.0e-51 205.7 218 51.8
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 5.0e-50 202.6 224 51.8
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 5.0e-50 202.6 226 54.4
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 8.6e-50 201.8 252 46.0
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 1.1e-49 201.4 253 48.2
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 4.3e-49 199.5 245 45.7
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 2.8e-48 196.8 365 40.0
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 8.1e-48 195.3 216 49.5
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 9.8e-46 188.3 214 49.5
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 4.7e-40 169.5 250 41.6
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 4.0e-39 166.4 252 42.5
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 1.4e-36 157.9 252 42.5
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 7.1e-36 155.6 263 40.3
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 3.9e-34 149.8 124 62.1
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.5e-33 147.9 125 59.2
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 4.3e-33 146.4 115 61.7
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 6.2e-32 142.5 123 58.5
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 8.1e-32 142.1 122 59.0
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 8.9e-31 138.7 200 42.0
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 2.0e-30 137.5 111 61.3
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 3.4e-30 136.7 88 78.4
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.9e-28 131.0 88 76.1
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 2.1e-27 127.5 116 57.8
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 2.1e-24 117.5 99 60.6
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 2.4e-23 114.0 69 81.2
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 2.9e-21 107.1 62 87.1
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 2.4e-20 104.0 254 32.7
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 2.4e-15 87.4 272 29.4
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 1.1e-12 78.6 185 30.8
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.4e-12 77.4 47 83.0
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 3.5e-11 73.6 211 28.9
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 1.9e-09 67.8 203 26.6
ATR0138G010 Amborella trichopoda HOM05D006516 ORTHO05D008083 5.8e-06 56.2 37 78.4


User provided reference genes

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