Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16984_v3 Cicer arietinum L. HOM05D005757 ORTHO05D007090 3.8e-45 184.5 95 100.0
Phvul.009G154300 Phaseolus vulgaris HOM05D005757 ORTHO05D007090 5.7e-41 170.6 93 91.4
Lj1g0019812 Lotus japonicus HOM05D005757 ORTHO05D007090 7.4e-41 170.2 93 91.4
VMungo1309G1065 Vigna mungo HOM05D005757 ORTHO05D007090 7.4e-41 170.2 93 90.3
TPR.G33548 Trifolium pratense HOM05D005757 ORTHO05D007090 9.7e-41 169.9 93 92.5
Medtr3g096710 Medicago truncatula HOM05D005757 ORTHO05D007090 2.2e-40 168.7 93 91.4
Glyma.04G210000 Glycine max HOM05D005757 ORTHO05D007090 2.8e-40 168.3 93 88.2
Lalb_Chr11g0068621 Lupinus albus HOM05D005757 ORTHO05D007090 2.8e-40 168.3 93 89.2
Glyma.06G156000 Glycine max HOM05D005757 ORTHO05D007090 3.7e-40 167.9 93 89.2
Psat5g060320 Pisum sativum HOM05D005757 ORTHO05D007090 1.8e-39 165.6 92 90.2
Dinv16327 Davidia involucrata HOM05D005757 ORTHO05D007090 3.1e-39 164.9 93 89.2
CSS0011153 Camellia sinensis var. sinensis HOM05D005757 ORTHO05D007090 6.9e-39 163.7 93 87.1
QL10p041184 Quercus lobata HOM05D005757 ORTHO05D007090 1.2e-38 162.9 92 87.0
QL10p041477 Quercus lobata HOM05D005757 ORTHO05D007090 1.2e-38 162.9 92 87.0
Actinidia16522 Actinidia chinensis HOM05D005757 ORTHO05D007090 2.6e-38 161.8 94 85.1
Prupe.4G275900 Prunus persica HOM05D005757 ORTHO05D007090 2.6e-38 161.8 92 87.0
RcHm_v2.0_Chr2g0122631 Rosa chinensis HOM05D005757 ORTHO05D007090 2.6e-38 161.8 91 89.0
Atru.chr4.999 Acer truncatum HOM05D005757 ORTHO05D007090 7.7e-38 160.2 92 83.7
Rhsim08G0000300 Rhododendron simsii HOM05D005757 ORTHO05D007090 2.9e-37 158.3 93 86.0
MSTRG.23485 Avicennia marina HOM05D005757 ORTHO05D007090 3.8e-37 157.9 93 83.9
FvH4_1g24990 Fragaria vesca HOM05D005757 ORTHO05D007090 3.8e-37 157.9 91 86.8
MD00G1091800 Malus domestica HOM05D005757 ORTHO05D007090 3.8e-37 157.9 92 82.6
HanXRQChr01g0019111 Helianthus annuus HOM05D005757 ORTHO05D007090 6.5e-37 157.1 93 84.9
Manes.12G147700 Manihot esculenta HOM05D005757 ORTHO05D007090 6.5e-37 157.1 93 84.9
CsaV3_2G019560 Cucumis sativus L. HOM05D005757 ORTHO05D007090 1.4e-36 156.0 92 83.7
Nitab4.5_0004105g0030 Nicotiana tabacum HOM05D005757 ORTHO05D007090 1.4e-36 156.0 93 81.7
FAN23G0434 Fragaria x ananassa HOM05D005757 ORTHO05D007090 1.9e-36 155.6 91 85.7
FAN26G2810 Fragaria x ananassa HOM05D005757 ORTHO05D007090 1.9e-36 155.6 91 85.7
Lsat_1_v5_gn_7_106341 Lactuca sativa HOM05D005757 ORTHO05D007090 1.9e-36 155.6 93 83.9
Oeu037858.1 Olea europaea HOM05D005757 ORTHO05D007090 1.9e-36 155.6 93 84.9
CiPaw.04G079300 Carya illinoinensis HOM05D005757 ORTHO05D007090 2.5e-36 155.2 92 84.8
Cpa.g.sc37.11 Carica papaya HOM05D005757 ORTHO05D007090 4.2e-36 154.5 92 80.4
PGR119G2343 Punica granatum HOM05D005757 ORTHO05D007090 4.2e-36 154.5 92 81.5
MELO3C023217.2 Cucumis melo HOM05D005757 ORTHO05D007090 5.5e-36 154.1 92 81.5
Manes.12G159200 Manihot esculenta HOM05D005757 ORTHO05D007090 5.5e-36 154.1 93 83.9
Eucgr.I00121 Eucalyptus grandis HOM05D005757 ORTHO05D007090 7.2e-36 153.7 92 81.5
FAN28G1123 Fragaria x ananassa HOM05D005757 ORTHO05D007090 7.2e-36 153.7 91 84.6
ECA248G3451 Erigeron canadensis HOM05D005757 ORTHO05D007090 2.1e-35 152.1 92 81.5
Aa31LG3G17760 Aethionema arabicum HOM05D005757 ORTHO05D007090 2.7e-35 151.8 93 78.5
Gohir.A05G381400 Gossypium hirsutum HOM05D005757 ORTHO05D007090 2.7e-35 151.8 92 79.3
Nitab4.5_0010993g0010 Nicotiana tabacum HOM05D005757 ORTHO05D007090 2.7e-35 151.8 92 80.4
THA.LOC104818419 Tarenaya hassleriana HOM05D005757 ORTHO05D007090 2.7e-35 151.8 91 80.2
Peaxi162Scf00842g00217 Petunia axillaris HOM05D005757 ORTHO05D007090 6.1e-35 150.6 93 79.6
BcaC03g13245 Brassica carinata HOM05D005757 ORTHO05D007090 7.9e-35 150.2 93 79.6
C02p03770 Brassica napus HOM05D005757 ORTHO05D007090 7.9e-35 150.2 93 79.6
BolC2t06338H Brassica oleracea HOM05D005757 ORTHO05D007090 7.9e-35 150.2 93 79.6
Migut.H00828 Erythranthe guttata HOM05D005757 ORTHO05D007090 7.9e-35 150.2 93 78.5
CAN.G186.1 Capsicum annuum HOM05D005757 ORTHO05D007090 1.0e-34 149.8 93 78.5
BcaB05g21563 Brassica carinata HOM05D005757 ORTHO05D007090 1.4e-34 149.4 93 78.5
BraA02t04972Z Brassica rapa HOM05D005757 ORTHO05D007090 1.4e-34 149.4 93 79.6
Thhalv10013744m.g Eutrema salsugineum HOM05D005757 ORTHO05D007090 1.4e-34 149.4 93 78.5
AUR62006868 Chenopodium quinoa HOM05D005757 ORTHO05D007090 2.3e-34 148.7 93 77.4
Nn1g08970 Nelumbo nucifera HOM05D005757 ORTHO05D007090 3.0e-34 148.3 92 80.4
Solyc04g009430.3 Solanum lycopersicum HOM05D005757 ORTHO05D007090 3.0e-34 148.3 91 78.0
Sopen04g004560 Solanum pennellii HOM05D005757 ORTHO05D007090 3.0e-34 148.3 91 78.0
DCAR_009593 Daucus carota HOM05D005757 ORTHO05D007090 3.9e-34 147.9 91 82.4
Gohir.D04G033900 Gossypium hirsutum HOM05D005757 ORTHO05D007090 3.9e-34 147.9 92 77.2
PSO541G2210 Papaver somniferum HOM05D005757 ORTHO05D007090 3.9e-34 147.9 92 80.4
PGSC0003DMG400032556 Solanum tuberosum HOM05D005757 ORTHO05D007090 3.9e-34 147.9 91 78.0
CANSAT01G1027 Cannabis sativa HOM05D005757 ORTHO05D007090 5.2e-34 147.5 91 79.1
Ciclev10001356m.g Citrus clementina HOM05D005757 ORTHO05D007090 5.2e-34 147.5 92 78.3
CARHR204190 Cardamine hirsuta HOM05D005757 ORTHO05D007090 8.8e-34 146.7 93 78.5
TWI75G1840 Tripterygium wilfordii HOM05D005757 ORTHO05D007090 2.0e-33 145.6 92 79.3
Carub.0006s0779 Capsella rubella HOM05D005757 ORTHO05D007090 2.6e-33 145.2 93 77.4
Sp6g34070 Schrenkiella parvula HOM05D005757 ORTHO05D007090 2.6e-33 145.2 91 78.0
Thecc.01G137800 Theobroma cacao HOM05D005757 ORTHO05D007090 2.6e-33 145.2 92 75.0
AL6G19620 Arabidopsis lyrata HOM05D005757 ORTHO05D007090 4.4e-33 144.4 91 78.0
AT5G09230 Arabidopsis thaliana HOM05D005757 ORTHO05D007090 9.7e-33 143.3 93 76.3
GSVIVG01022342001 Vitis vinifera HOM05D005757 ORTHO05D007090 9.7e-33 143.3 93 77.4
Hund07233 Selenicereus undatus HOM05D005757 ORTHO05D007090 1.3e-32 142.9 93 74.2
TAR625G0433 Trochodendron aralioides HOM05D005757 ORTHO05D007090 1.7e-32 142.5 92 73.9
Aqoxy6G00314 Aquilegia oxysepala HOM05D005757 ORTHO05D007090 2.8e-32 141.7 92 75.0
EL10Ac4g09631 Beta vulgaris HOM05D005757 ORTHO05D007090 2.8e-32 141.7 92 76.1
unitig_52.g17615 Utricularia gibba HOM05D005757 ORTHO05D007090 6.3e-32 140.6 91 76.9
Sabra05G0055900 Salix brachista HOM05D005757 ORTHO05D007090 9.1e-31 136.7 128 61.7
vmacro18686 Vaccinium macrocarpon HOM05D005757 ORTHO05D007090 9.1e-31 136.7 77 88.3
HPP92_011392 Vanilla planifolia HOM05D005757 ORTHO05D007090 2.0e-30 135.6 92 72.8
SGA_v2.0_scaffold20G08952 Striga asiatica HOM05D005757 ORTHO05D007090 3.5e-30 134.8 77 84.4
Cfa002199 Carpinus fangiana HOM05D005757 ORTHO05D007090 4.5e-30 134.4 76 88.2
PSO675G6061 Papaver somniferum HOM05D005757 ORTHO05D007090 7.7e-30 133.7 128 58.6
QL05p088935 Quercus lobata HOM05D005757 ORTHO05D007090 1.3e-29 132.9 77 85.7
ATR0584G010 Amborella trichopoda HOM05D005757 ORTHO05D007090 2.2e-29 132.1 91 71.4
Lj7C583G3 Lonicera japonica HOM05D005757 ORTHO05D007090 8.5e-29 130.2 93 73.1
QL05p089323 Quercus lobata HOM05D005757 ORTHO05D007090 8.5e-29 130.2 75 86.7
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 2.5e-28 128.6 75 86.7
AUR62000523 Chenopodium quinoa HOM05D005757 ORTHO05D007090 1.6e-27 125.9 77 79.2
COL.COLO4_35820 Corchorus olitorius HOM05D005757 ORTHO05D007090 6.1e-27 124.0 80 76.2
Zm00001eb408300 Zea mays HOM05D005757 ORTHO05D007090 1.2e-25 119.8 92 65.2
Os12g0179800 Oryza sativa ssp. japonica HOM05D005757 ORTHO05D007090 2.0e-25 119.0 92 63.0
Pp3c16_14390 Physcomitrium patens HOM05D005757 ORTHO05D007090 2.0e-25 119.0 90 65.6
MBI03_g28480_MAGBIO Magnolia biondii HOM05D005757 ORTHO05D007090 3.3e-25 118.2 73 80.8
ECA248G1240 Erigeron canadensis HOM05D005757 ORTHO05D007090 7.5e-25 117.1 91 62.6
Sed0027545 Sechium edule HOM05D005757 ORTHO05D007090 9.7e-25 116.7 92 67.4
AagrBONN_evm.TU.Sc2ySwM_228.4835 Anthoceros agrestis HOM05D005757 ORTHO05D007090 1.1e-23 113.2 91 60.4
CDE08G1654 Ceratophyllum demersum HOM05D005757 ORTHO05D007090 1.1e-23 113.2 92 57.6
QL10p041201 Quercus lobata HOM05D005757 ORTHO05D007090 5.0e-21 104.4 62 83.9
Mapoly0093s0042 Marchantia polymorpha HOM05D005757 ORTHO05D007090 3.2e-20 101.7 89 57.3
SMO115G0270 Selaginella moellendorffii HOM05D005757 ORTHO05D007090 3.7e-16 88.2 82 53.7
Lj1g0002676 Lotus japonicus HOM05D000058 ORTHO05D000077 3.1e-15 85.1 69 68.1
Cc07_g19330 Coffea canephora HOM05D005757 ORTHO05D007090 9.1e-15 83.6 49 83.7
Cc07_g19340 Coffea canephora HOM05D005757 ORTHO05D007090 7.7e-14 80.5 43 88.4
MCO15G064 Micromonas commoda HOM05D005757 ORTHO05D007090 1.0e-13 80.1 83 47.0
Sc16g0009550 Simmondsia chinensis HOM05D005757 ORTHO05D007090 5.5e-12 74.3 43 83.7
Gorai.012G038200 Gossypium raimondii HOM05D005757 ORTHO05D007090 1.2e-11 73.2 43 81.4
Cre12.g524650 Chlamydomonas reinhardtii HOM05D005757 ORTHO05D007090 3.0e-10 68.6 74 51.4


User provided reference genes

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