Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16897_v3 Cicer arietinum L. HOM05D006130 ORTHO05D007491 1.6e-208 729.2 366 100.0
Medtr3g095020 Medicago truncatula HOM05D006130 ORTHO05D007491 3.0e-162 575.5 371 80.9
TPR.G23729 Trifolium pratense HOM05D006130 ORTHO05D007491 5.6e-161 571.2 369 78.9
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 7.1e-148 527.7 375 74.9
Glyma.04G218800 Glycine max HOM05D006130 ORTHO05D007491 3.3e-137 492.3 362 70.2
Lj1g0022742 Lotus japonicus HOM05D006130 ORTHO05D007491 3.5e-131 472.2 366 66.7
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 1.3e-125 453.8 369 63.1
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 1.3e-122 443.7 381 59.8
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 2.0e-118 429.9 331 66.8
QL06p031976 Quercus lobata HOM05D006130 ORTHO05D007491 2.1e-107 393.3 388 54.9
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea HOM05D006130 ORTHO05D007491 1.0e-106 391.0 380 56.6
Haze_25050 Corylus avellana HOM05D006130 ORTHO05D007491 4.3e-105 385.6 377 52.8
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea HOM05D006130 ORTHO05D007491 1.3e-104 384.0 368 55.4
FAN23G0816 Fragaria x ananassa HOM05D006130 ORTHO05D007491 1.2e-102 377.5 386 51.6
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 3.4e-102 375.9 391 52.4
FAN19G1269 Fragaria x ananassa HOM05D006130 ORTHO05D007491 5.9e-102 375.2 386 51.3
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 2.2e-101 373.2 366 52.5
Cfa002758 Carpinus fangiana HOM05D006130 ORTHO05D007491 1.4e-100 370.5 391 51.9
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 3.6e-99 365.9 372 51.3
RcHm_v2.0_Chr2g0117041 Rosa chinensis HOM05D006130 ORTHO05D007491 4.6e-99 365.5 377 51.2
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 5.1e-98 362.1 383 49.9
CANSAT80G2857 Cannabis sativa HOM05D006130 ORTHO05D007491 6.7e-98 361.7 376 51.6
FAN26G2148 Fragaria x ananassa HOM05D006130 ORTHO05D007491 6.7e-98 361.7 386 49.7
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 4.8e-96 355.5 382 50.5
Atru.chr4.339 Acer truncatum HOM05D006130 ORTHO05D007491 4.1e-95 352.4 389 49.9
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 1.4e-92 344.0 392 48.7
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 1.9e-92 343.6 389 51.2
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 2.5e-92 343.2 385 50.9
PGR102G0730 Punica granatum HOM05D006130 ORTHO05D007491 3.2e-92 342.8 388 51.0
Lj2C566T4 Lonicera japonica HOM05D006130 ORTHO05D007491 4.2e-92 342.4 374 49.7
Cpa.g.sc191.11 Carica papaya HOM05D006130 ORTHO05D007491 7.2e-92 341.7 383 47.0
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 7.2e-92 341.7 389 46.5
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 3.0e-90 336.3 382 49.5
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 2.6e-89 333.2 375 45.3
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 7.4e-89 331.6 385 47.0
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 9.7e-89 331.3 379 47.0
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 8.2e-88 328.2 378 45.5
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 8.2e-88 328.2 387 46.3
Thecc.01G113900 Theobroma cacao HOM05D006130 ORTHO05D007491 1.1e-87 327.8 380 46.3
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 5.3e-87 325.5 367 46.3
Gorai.007G244700 Gossypium raimondii HOM05D006130 ORTHO05D007491 4.5e-86 322.4 393 46.3
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 5.9e-86 322.0 383 47.5
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 1.7e-85 320.5 378 45.8
Aqoxy7G04042 Aquilegia oxysepala HOM05D006130 ORTHO05D007491 2.9e-85 319.7 383 45.4
Gohir.D11G231600 Gossypium hirsutum HOM05D006130 ORTHO05D007491 2.9e-85 319.7 393 45.0
Duzib264G0573 Durio zibethinus HOM05D006130 ORTHO05D007491 5.0e-85 318.9 379 44.6
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 5.0e-85 318.9 370 46.8
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 5.0e-85 318.9 379 44.9
MELO3C025043.2 Cucumis melo HOM05D006130 ORTHO05D007491 6.5e-85 318.5 374 46.3
CsaV3_6G002440 Cucumis sativus L. HOM05D006130 ORTHO05D007491 6.5e-85 318.5 374 46.5
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 8.5e-85 318.2 367 46.0
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 8.5e-85 318.2 381 44.1
THA.LOC104818474 Tarenaya hassleriana HOM05D006130 ORTHO05D007491 8.5e-85 318.2 395 45.1
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 1.1e-84 317.8 389 45.5
PSO210G3121 Papaver somniferum HOM05D006130 ORTHO05D007491 4.2e-84 315.8 391 44.5
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.2e-83 314.3 376 45.7
Gohir.A11G197900 Gossypium hirsutum HOM05D006130 ORTHO05D007491 2.1e-83 313.5 393 45.5
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 2.7e-83 313.2 375 44.0
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 3.6e-83 312.8 376 44.9
ClCG11G005560 Citrullus lanatus HOM05D006130 ORTHO05D007491 4.7e-83 312.4 372 47.8
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 7.9e-83 311.6 406 46.1
AUR62016283 Chenopodium quinoa HOM05D006130 ORTHO05D007491 2.3e-82 310.1 380 42.4
Thhalv10004393m.g Eutrema salsugineum HOM05D006130 ORTHO05D007491 6.7e-82 308.5 391 46.8
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 1.5e-81 307.4 420 41.7
C03p61330 Brassica napus HOM05D006130 ORTHO05D007491 5.7e-81 305.4 382 46.9
Sed0017229 Sechium edule HOM05D006130 ORTHO05D007491 7.4e-81 305.1 371 46.4
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 4.8e-80 302.4 363 44.6
AUR62003302 Chenopodium quinoa HOM05D006130 ORTHO05D007491 6.3e-80 302.0 372 41.9
Glyma.06G147000 Glycine max HOM05D006130 ORTHO05D007491 1.4e-79 300.8 251 63.3
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 2.4e-79 300.1 381 46.7
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 3.1e-79 299.7 399 42.4
Duzib147G1554 Durio zibethinus HOM05D006130 ORTHO05D007491 3.1e-79 299.7 346 48.0
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 3.1e-79 299.7 371 43.9
HPP92_016462 Vanilla planifolia HOM05D006130 ORTHO05D007491 3.1e-79 299.7 378 43.7
Migut.L00069 Erythranthe guttata HOM05D006130 ORTHO05D007491 9.1e-79 298.1 366 44.5
Hund03536 Selenicereus undatus HOM05D006130 ORTHO05D007491 1.6e-78 297.4 390 41.5
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 2.0e-78 297.0 374 44.1
HPP92_027147 Vanilla planifolia HOM05D006130 ORTHO05D007491 2.0e-78 297.0 371 44.5
FvH4_1g22740 Fragaria vesca HOM05D006130 ORTHO05D007491 2.6e-78 296.6 328 49.1
Peaxi162Scf00106g00208 Petunia axillaris HOM05D006130 ORTHO05D007491 2.6e-78 296.6 373 43.2
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 1.3e-77 294.3 367 47.4
A06p31630 Brassica napus HOM05D006130 ORTHO05D007491 1.3e-77 294.3 382 47.9
AL8G42310 Arabidopsis lyrata HOM05D006130 ORTHO05D007491 6.5e-77 292.0 386 46.4
Sp2g27910 Schrenkiella parvula HOM05D006130 ORTHO05D007491 1.1e-76 291.2 385 45.7
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 3.2e-76 289.7 382 46.6
vmacro18637 Vaccinium macrocarpon HOM05D006130 ORTHO05D007491 3.2e-76 289.7 434 41.0
BolC3t18393H Brassica oleracea HOM05D006130 ORTHO05D007491 1.6e-75 287.3 376 46.8
Carub.0008s2566 Capsella rubella HOM05D006130 ORTHO05D007491 1.6e-75 287.3 377 45.4
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 3.6e-75 286.2 369 43.6
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 3.6e-75 286.2 364 45.1
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 1.0e-74 284.6 369 47.2
BcaB02g09834 Brassica carinata HOM05D006130 ORTHO05D007491 2.6e-73 280.0 383 47.0
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 5.7e-73 278.9 382 41.4
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 6.3e-72 275.4 371 42.9
SEGI_25559 Sequoiadendron giganteum HOM05D006130 ORTHO05D007491 8.2e-72 275.0 402 39.1
ATR0665G503 Amborella trichopoda HOM05D006130 ORTHO05D007491 2.4e-71 273.5 388 40.5
SMO358G0378 Selaginella moellendorffii HOM05D006130 ORTHO05D007491 4.1e-71 272.7 402 38.6
SGA_v2.0_scaffold47G17703 Striga asiatica HOM05D006130 ORTHO05D007491 2.0e-70 270.4 378 41.5
Ah.14g080600 Amaranthus hybridus HOM05D006130 ORTHO05D007491 8.5e-69 265.0 357 41.7
unitig_62.g23431 Utricularia gibba HOM05D006130 ORTHO05D007491 2.5e-68 263.5 359 42.3
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 8.0e-67 258.5 369 40.1
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 6.5e-61 238.8 411 37.2
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.1e-60 238.0 376 38.3
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 1.5e-60 237.7 417 37.4
Ah.03g141370 Amaranthus hybridus HOM05D006130 ORTHO05D007491 1.4e-58 231.1 391 38.4
GSVIVG01022231001 Vitis vinifera HOM05D006130 ORTHO05D007491 2.3e-58 230.3 368 36.1
TAR628G0645 Trochodendron aralioides HOM05D006130 ORTHO05D007491 7.5e-57 225.3 297 44.1
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 1.7e-56 224.2 302 42.4
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 3.1e-55 219.9 357 35.0
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-53 213.4 172 59.3
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.9e-53 213.4 342 37.4
Actinidia12211 Actinidia chinensis HOM05D006130 ORTHO05D007491 4.3e-52 209.5 268 45.5
Sc03g0004370 Simmondsia chinensis HOM05D006130 ORTHO05D007491 6.8e-50 202.2 278 41.4
Eucgr.H04861 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.7e-48 197.6 178 53.9
AT5G64830 Arabidopsis thaliana HOM05D006130 ORTHO05D007491 4.6e-46 189.5 281 47.3
CBR_g30690 Chara braunii HOM05D006130 ORTHO05D007491 1.2e-41 174.9 474 29.1
AagrBONN_evm.TU.Sc2ySwM_228.1847 Anthoceros agrestis HOM05D006130 ORTHO05D007491 3.7e-32 143.3 143 44.8
MCO11G927 Micromonas commoda HOM05D006130 ORTHO05D007491 6.4e-24 115.9 437 28.6
Actinidia35264 Actinidia chinensis HOM05D006130 ORTHO05D007491 3.3e-20 103.6 81 60.5
SGA_v2.0_scaffold34G13625 Striga asiatica HOM05D006130 ORTHO05D007491 1.8e-18 97.8 85 50.6
AagrBONN_evm.TU.Sc2ySwM_228.1848 Anthoceros agrestis HOM05D006130 ORTHO05D007491 1.5e-17 94.7 83 53.0
DCAR_006919 Daucus carota HOM05D005189 ORTHO05D006093 1.2e-14 85.1 358 23.5
SGA_v2.0_scaffold32G12965 Striga asiatica HOM05D006130 ORTHO05D007491 2.1e-14 84.3 80 51.2
CSS0031632 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 2.7e-14 84.0 367 23.7
DCAR_005781 Daucus carota HOM05D005189 ORTHO05D006093 2.7e-14 84.0 359 24.5
CSS0046497 Camellia sinensis var. sinensis HOM05D005189 ORTHO05D006093 1.0e-13 82.0 365 24.1
SGA_v2.0_scaffold334G49031 Striga asiatica HOM05D000141 ORTHO05D000780 1.3e-13 81.6 341 25.2
Manes.05G000401 Manihot esculenta HOM05D005189 ORTHO05D006093 6.6e-13 79.3 394 23.6
Migut.D00121 Erythranthe guttata HOM05D005189 ORTHO05D006093 1.1e-12 78.6 388 25.5
Manes.03G058600 Manihot esculenta HOM05D005189 ORTHO05D006093 1.1e-12 78.6 394 23.6
Actinidia25825 Actinidia chinensis HOM05D005189 ORTHO05D006093 1.5e-12 78.2 379 22.7
PGR044G0984 Punica granatum HOM05D005189 ORTHO05D006093 1.5e-12 78.2 364 22.8
PGR047G0002 Punica granatum HOM05D005189 ORTHO05D006093 1.5e-12 78.2 364 22.8
Lalb_Chr01g0008881 Lupinus albus HOM05D005189 ORTHO05D006093 1.9e-12 77.8 361 24.9
Cre14.g608500 Chlamydomonas reinhardtii HOM05D006130 ORTHO05D007491 3.3e-12 77.0 121 33.9
PSO782G1813 Papaver somniferum HOM05D005189 ORTHO05D006093 1.3e-11 75.1 391 23.8
Atru.chr5.1082 Acer truncatum HOM05D005189 ORTHO05D006093 2.1e-11 74.3 396 22.5
Aa31LG5G1890 Aethionema arabicum HOM05D005189 ORTHO05D006093 2.1e-11 74.3 357 23.8
Ciclev10020359m.g Citrus clementina HOM05D005189 ORTHO05D006093 2.1e-11 74.3 393 24.7
Rhsim01G0287800 Rhododendron simsii HOM05D005189 ORTHO05D006093 2.8e-11 73.9 360 23.3
GSVIVG01028059001 Vitis vinifera HOM05D005189 ORTHO05D006093 3.6e-11 73.6 379 23.2
Glyma.09G081700 Glycine max HOM05D005189 ORTHO05D006093 4.8e-11 73.2 377 23.1
arahy.Tifrunner.gnm1.ann1.ZR0QLK Arachis hypogaea HOM05D005189 ORTHO05D006093 1.8e-10 71.2 362 23.5
Sp6g02120 Schrenkiella parvula HOM05D005189 ORTHO05D006093 1.8e-10 71.2 391 23.8
unitig_22.g5230 Utricularia gibba HOM05D005189 ORTHO05D006093 1.8e-10 71.2 363 24.2
BcaB01g02068 Brassica carinata HOM05D005189 ORTHO05D006093 6.9e-10 69.3 358 25.1
BcaC04g24048 Brassica carinata HOM05D005189 ORTHO05D006093 6.9e-10 69.3 359 24.2
Eucgr.D00103 Eucalyptus grandis HOM05D005189 ORTHO05D006093 6.9e-10 69.3 374 24.1
Thhalv10028689m.g Eutrema salsugineum HOM05D005189 ORTHO05D006093 6.9e-10 69.3 357 24.9
AT4G02220 Arabidopsis thaliana HOM05D005189 ORTHO05D006093 9.0e-10 68.9 350 24.9
arahy.Tifrunner.gnm1.ann1.4RF6J7 Arachis hypogaea HOM05D005189 ORTHO05D006093 9.0e-10 68.9 368 25.0
arahy.Tifrunner.gnm1.ann1.U1QXXC Arachis hypogaea HOM05D005189 ORTHO05D006093 9.0e-10 68.9 366 23.8
HanXRQChr04g0111211 Helianthus annuus HOM05D005189 ORTHO05D006093 9.0e-10 68.9 350 23.4
arahy.Tifrunner.gnm1.ann1.3WZ8U6 Arachis hypogaea HOM05D005189 ORTHO05D006093 1.2e-09 68.6 366 23.8
AL6G50910 Arabidopsis lyrata HOM05D005189 ORTHO05D006093 1.5e-09 68.2 350 24.3
HanXRQChr04g0114701 Helianthus annuus HOM05D005189 ORTHO05D006093 1.5e-09 68.2 370 25.4
Potri.002G201200 Populus trichocarpa HOM05D005189 ORTHO05D006093 1.5e-09 68.2 394 22.3
Aqoxy2G02861 Aquilegia oxysepala HOM05D005189 ORTHO05D006093 2.0e-09 67.8 350 25.7
Rhsim13G0007900 Rhododendron simsii HOM05D005189 ORTHO05D006093 2.0e-09 67.8 377 24.4
arahy.Tifrunner.gnm1.ann1.ALS4S9 Arachis hypogaea HOM05D005189 ORTHO05D006093 3.4e-09 67.0 340 21.8
PSO765G0055 Papaver somniferum HOM05D005189 ORTHO05D006093 3.4e-09 67.0 393 22.6
Pp3c22_7380 Physcomitrium patens HOM05D005189 ORTHO05D006093 3.4e-09 67.0 150 31.3
Eucgr.D00338 Eucalyptus grandis HOM05D005189 ORTHO05D006093 4.5e-09 66.6 357 26.3
Gohir.D11G168500 Gossypium hirsutum HOM05D005189 ORTHO05D006093 5.8e-09 66.2 359 22.3
Gorai.007G180000 Gossypium raimondii HOM05D005189 ORTHO05D006093 5.8e-09 66.2 344 22.7
Lsat_1_v5_gn_8_164980 Lactuca sativa HOM05D005189 ORTHO05D006093 7.6e-09 65.9 359 24.5
Oeu008336.1 Olea europaea HOM05D005189 ORTHO05D006093 7.6e-09 65.9 356 23.0
Sc05g0003490 Simmondsia chinensis HOM05D005189 ORTHO05D006093 7.6e-09 65.9 368 21.7
CiPaw.01G112900 Carya illinoinensis HOM05D005189 ORTHO05D006093 1.3e-08 65.1 378 22.2
Gohir.A11G162200 Gossypium hirsutum HOM05D005189 ORTHO05D006093 1.3e-08 65.1 359 22.3
DCAR_022674 Daucus carota HOM05D005189 ORTHO05D006093 6.4e-08 62.8 351 25.1
PRCOL_00001898 Prasinoderma coloniale HOM05D006130 ORTHO05D007491 6.4e-08 62.8 192 28.1
Cfa010639 Carpinus fangiana HOM05D005189 ORTHO05D006093 1.1e-07 62.0 361 23.8
VMungo0464G0625 Vigna mungo HOM05D005189 ORTHO05D006093 1.4e-07 61.6 361 21.6
SEGI_10631 Sequoiadendron giganteum HOM05D005189 ORTHO05D006093 1.9e-07 61.2 352 20.7
ATR0665G541 Amborella trichopoda HOM05D005189 ORTHO05D006093 4.2e-07 60.1 342 23.7
Duzib128G0399 Durio zibethinus HOM05D005189 ORTHO05D006093 4.2e-07 60.1 361 22.4
CBR_g22284 Chara braunii HOM05D005189 ORTHO05D006093 9.3e-07 58.9 96 32.3
Oeu021746.1 Olea europaea HOM05D005189 ORTHO05D006093 9.3e-07 58.9 343 23.6
Thecc.05G192400 Theobroma cacao HOM05D005189 ORTHO05D006093 3.5e-06 57.0 364 21.4
Actinidia21022 Actinidia chinensis HOM05D005189 ORTHO05D006093 6.0e-06 56.2 115 32.2
COL.COLO4_33288 Corchorus olitorius HOM05D005189 ORTHO05D006093 6.0e-06 56.2 90 34.4
SMO118G0558 Selaginella moellendorffii HOM05D005189 ORTHO05D006093 6.0e-06 56.2 330 21.2


User provided reference genes

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