Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 1.1e-121 439.9 217 100.0
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 2.7e-78 295.8 219 69.4
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 1.3e-77 293.5 224 68.3
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 2.1e-70 269.6 217 65.0
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 9.6e-60 234.2 233 59.2
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 1.4e-58 230.3 239 56.1
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 2.4e-58 229.6 233 57.5
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 5.8e-57 224.9 240 55.4
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 1.9e-55 219.9 244 54.1
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 3.3e-28 129.4 223 40.4
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 2.1e-27 126.7 244 36.5
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.1e-26 122.9 205 40.0
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.5e-25 120.6 212 38.2
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 4.5e-25 119.0 212 38.2
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 4.5e-25 119.0 245 37.1
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 4.5e-25 119.0 245 37.1
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.7e-24 117.1 205 38.5
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 8.5e-24 114.8 240 35.0
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 1.9e-23 113.6 233 36.9
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 4.2e-23 112.5 280 34.3
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 4.2e-23 112.5 243 34.6
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 7.2e-23 111.7 205 38.5
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.2e-22 110.9 251 34.7
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.2e-22 110.9 251 34.7
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 1.2e-22 110.9 251 34.7
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 2.7e-22 109.8 222 36.5
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 2.7e-22 109.8 247 34.0
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 7.9e-22 108.2 219 35.6
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 1.0e-21 107.8 250 32.4
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 1.0e-21 107.8 256 32.4
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 1.3e-21 107.5 242 33.5
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 1.3e-21 107.5 251 34.7
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 1.8e-21 107.1 277 32.9
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 3.0e-21 106.3 221 35.7
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 5.1e-21 105.5 252 32.5
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 5.1e-21 105.5 270 32.2
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 6.7e-21 105.1 216 34.3
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 6.7e-21 105.1 216 34.3
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 8.7e-21 104.8 217 35.0
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 1.1e-20 104.4 240 34.2
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 2.5e-20 103.2 233 36.1
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 4.3e-20 102.4 285 31.2
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 5.7e-20 102.1 239 34.3
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 9.7e-20 101.3 214 39.3
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 1.3e-19 100.9 215 37.2
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 1.3e-19 100.9 230 33.5
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.3e-19 100.9 235 36.6
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 4.8e-19 99.0 245 33.9
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 8.2e-19 98.2 232 34.5
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 8.2e-19 98.2 229 34.1
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 8.2e-19 98.2 243 33.7
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 1.1e-18 97.8 247 36.0
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.4e-18 97.4 252 32.9
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 1.8e-18 97.1 272 32.0
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 4.1e-18 95.9 256 30.9
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 6.9e-18 95.1 233 34.3
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 6.9e-18 95.1 185 35.1
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 6.9e-18 95.1 245 31.8
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 1.2e-17 94.4 228 35.1
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 1.2e-17 94.4 209 35.9
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 1.2e-17 94.4 255 32.2
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 1.5e-17 94.0 206 34.5
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 1.5e-17 94.0 217 33.2
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 1.5e-17 94.0 233 34.8
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 1.5e-17 94.0 245 33.9
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 2.6e-17 93.2 289 30.8
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 4.5e-17 92.4 231 34.6
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 4.5e-17 92.4 247 32.8
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 4.5e-17 92.4 222 32.9
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 7.7e-17 91.7 238 35.3
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 7.7e-17 91.7 240 32.1
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 7.7e-17 91.7 227 33.0
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.0e-16 91.3 258 31.4
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.3e-16 90.9 285 30.9
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 1.7e-16 90.5 204 33.8
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 1.7e-16 90.5 259 32.4
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 2.9e-16 89.7 246 31.7
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 2.9e-16 89.7 206 36.4
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 3.8e-16 89.4 169 36.1
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 3.8e-16 89.4 243 34.2
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.5e-16 88.6 223 30.9
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 1.4e-15 87.4 215 33.5
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 1.9e-15 87.0 197 35.5
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 2.5e-15 86.7 196 34.2
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 7.2e-15 85.1 202 35.1
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 7.2e-15 85.1 245 32.2
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 1.2e-14 84.3 204 34.8
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 2.1e-14 83.6 200 35.5
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 2.1e-14 83.6 187 32.6
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 2.7e-14 83.2 204 33.8
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 3.6e-14 82.8 205 32.7
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 7.9e-14 81.6 280 31.1
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 1.0e-13 81.3 247 27.9
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 1.4e-13 80.9 194 33.5
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 1.8e-13 80.5 222 28.8
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 2.3e-13 80.1 222 28.8
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 6.7e-13 78.6 125 39.2
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 6.7e-13 78.6 248 27.8
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 2.0e-12 77.0 200 34.0
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 2.6e-12 76.6 220 29.5
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 1.2e-09 67.8 146 38.4
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 1.3e-08 64.3 135 37.0
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 1.3e-08 64.3 224 28.6
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 2.2e-08 63.5 245 29.0
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 2.1e-06 57.0 225 29.3


User provided reference genes

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