Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16763_v3 Cicer arietinum L. HOM05D000021 ORTHO05D025046 3.0e-63 245.0 119 100.0
Ca_16764_v3 Cicer arietinum L. HOM05D000021 ORTHO05D000010 8.7e-47 190.3 119 78.2
Psat5g073360 Pisum sativum HOM05D000021 ORTHO05D000010 1.6e-40 169.5 121 73.6
Psat5g076440 Pisum sativum HOM05D000021 ORTHO05D000010 5.6e-38 161.0 121 69.4
Medtr3g092390 Medicago truncatula HOM05D000021 ORTHO05D000010 1.5e-35 152.9 121 71.9
Medtr3g092420 Medicago truncatula HOM05D000021 ORTHO05D000010 2.7e-32 142.1 121 63.6
Lj1g0024228 Lotus japonicus HOM05D000021 ORTHO05D000010 5.7e-30 134.4 121 59.5
Glyma.06G134700 Glycine max HOM05D000021 ORTHO05D000010 4.6e-24 114.8 121 53.7
VMungo1309G0549 Vigna mungo HOM05D000021 ORTHO05D000010 1.1e-22 110.2 121 51.2
VMungo1309G1774 Vigna mungo HOM05D000021 ORTHO05D000010 1.1e-22 110.2 121 50.4
Glyma.04G230500 Glycine max HOM05D000021 ORTHO05D000010 1.3e-21 106.7 121 52.9
TPR.G28969 Trifolium pratense HOM05D000021 ORTHO05D025046 1.8e-20 102.8 106 57.5
Phvul.009G046600 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 3.1e-20 102.1 118 48.3
Phvul.009G046900 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 2.0e-19 99.4 118 48.3
Gohir.D05G317800 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.2e-18 95.9 121 46.3
TWI60G0857 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 5.0e-18 94.7 122 45.9
Gorai.009G340400 Gossypium raimondii HOM05D000021 ORTHO05D000010 3.2e-17 92.0 119 44.5
Duzib268G0098 Durio zibethinus HOM05D000021 ORTHO05D000010 3.6e-16 88.6 123 47.2
Gohir.A05G316500 Gossypium hirsutum HOM05D000021 ORTHO05D000010 2.3e-15 85.9 119 42.9
QL03p023376 Quercus lobata HOM05D000021 ORTHO05D000010 5.1e-15 84.7 115 42.6
CiPaw.15G019800 Carya illinoinensis HOM05D000021 ORTHO05D000010 6.7e-15 84.3 118 39.8
QL03p023399 Quercus lobata HOM05D000021 ORTHO05D000010 2.0e-14 82.8 115 40.0
QL03p024226 Quercus lobata HOM05D000021 ORTHO05D000010 2.5e-14 82.4 115 41.7
QL03p023439 Quercus lobata HOM05D000021 ORTHO05D000010 3.3e-14 82.0 115 43.5
CSS0003369 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 5.7e-14 81.3 117 41.0
CiPaw.15G020100 Carya illinoinensis HOM05D000021 ORTHO05D000010 9.7e-14 80.5 120 40.8
QL03p024318 Quercus lobata HOM05D000021 ORTHO05D000010 1.3e-13 80.1 115 40.9
Thecc.04G214000 Theobroma cacao HOM05D000021 ORTHO05D000010 1.7e-13 79.7 120 40.8
TWI56G1145 Tripterygium wilfordii HOM05D000021 ORTHO05D000010 2.2e-13 79.3 119 38.7
TAR540G0002 Trochodendron aralioides HOM05D000021 ORTHO05D000010 2.2e-13 79.3 119 41.2
Manes.18G089300 Manihot esculenta HOM05D000021 ORTHO05D000010 3.7e-13 78.6 116 42.2
QL03p024295 Quercus lobata HOM05D000021 ORTHO05D000010 1.4e-12 76.6 115 36.5
TPR.G10923 Trifolium pratense HOM05D000021 ORTHO05D025046 1.4e-12 76.6 66 71.2
arahy.Tifrunner.gnm1.ann1.41Z4IQ Arachis hypogaea HOM05D000021 ORTHO05D000010 2.4e-12 75.9 125 43.2
Dinv41111 Davidia involucrata HOM05D000021 ORTHO05D000010 2.4e-12 75.9 120 41.7
arahy.Tifrunner.gnm1.ann1.MMGG0C Arachis hypogaea HOM05D000021 ORTHO05D000010 6.9e-12 74.3 125 42.4
PGR042G2071 Punica granatum HOM05D000021 ORTHO05D000010 3.4e-11 72.0 128 39.1
CiPaw.15G020200 Carya illinoinensis HOM05D000021 ORTHO05D000010 5.9e-11 71.2 120 40.0
QL03p023371 Quercus lobata HOM05D000021 ORTHO05D000010 5.9e-11 71.2 115 38.3
GSVIVG01010055001 Vitis vinifera HOM05D000021 ORTHO05D025046 1.3e-10 70.1 118 43.2
QL03p024405 Quercus lobata HOM05D000021 ORTHO05D000010 2.5e-09 65.9 109 35.8
Eucgr.F02724 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.2e-09 65.5 121 38.8
vmacro12450 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.1e-08 62.8 119 28.6
THA.LOC104806039 Tarenaya hassleriana HOM05D000021 ORTHO05D000010 2.7e-08 62.4 120 39.2
QL03p024349 Quercus lobata HOM05D000021 ORTHO05D000010 3.6e-08 62.0 109 34.9
CSS0009995 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.0e-07 60.5 114 30.7
CSS0046182 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.4e-07 60.1 114 29.8
CSS0034441 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 2.3e-07 59.3 114 29.8
Nn5g28659 Nelumbo nucifera HOM05D000021 ORTHO05D000010 3.9e-07 58.5 127 35.4
Manes.08G090000 Manihot esculenta HOM05D000021 ORTHO05D000010 8.8e-07 57.4 118 29.7
vmacro08140 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.1e-06 57.0 120 30.8
vmacro08141 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.1e-06 57.0 120 30.0
vmacro22968 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.1e-06 57.0 120 30.8
CSS0037186 Camellia sinensis var. sinensis HOM05D000021 ORTHO05D000010 1.5e-06 56.6 118 30.5
COL.COLO4_05714 Corchorus olitorius HOM05D000021 ORTHO05D008832 2.0e-06 56.2 101 37.6
Manes.18G127600 Manihot esculenta HOM05D000021 ORTHO05D000010 2.0e-06 56.2 120 27.5
Nn1g07912 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.0e-06 56.2 118 31.4
Manes.08G090750 Manihot esculenta HOM05D000021 ORTHO05D000010 7.4e-06 54.3 118 28.0
Manes.08G090800 Manihot esculenta HOM05D000021 ORTHO05D000010 7.4e-06 54.3 118 28.0
TAR623G0201 Trochodendron aralioides HOM05D000021 ORTHO05D000010 7.4e-06 54.3 118 28.8
Manes.18G127100 Manihot esculenta HOM05D000021 ORTHO05D000010 9.7e-06 53.9 120 26.7
TAR624G1213 Trochodendron aralioides HOM05D000021 ORTHO05D000010 9.7e-06 53.9 118 28.0
vmacro22481 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 9.7e-06 53.9 120 26.7


User provided reference genes

Program Settings