Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 3.6e-143 511.5 249 100.0
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 3.7e-116 421.8 249 84.7
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.4e-115 419.9 253 81.0
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 9.1e-115 417.2 249 82.3
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.3e-113 413.3 252 84.1
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 6.5e-113 411.0 251 82.9
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.4e-110 403.3 254 80.3
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 1.2e-109 400.2 254 78.3
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.6e-106 389.8 250 79.2
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 5.4e-99 364.8 198 85.9
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 7.0e-99 364.4 204 84.8
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.2e-98 363.6 247 73.7
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 1.6e-98 363.2 217 79.7
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 2.0e-98 362.8 232 76.7
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.7e-98 362.5 198 85.4
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 2.7e-98 362.5 198 85.4
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 4.6e-98 361.7 195 86.2
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 5.9e-98 361.3 237 75.9
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 7.8e-98 360.9 247 73.7
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 7.8e-98 360.9 248 72.6
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 1.3e-97 360.1 230 75.7
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 2.3e-97 359.4 245 72.7
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 2.3e-97 359.4 242 73.6
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 3.0e-97 359.0 220 79.1
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 6.6e-97 357.8 242 74.4
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 3.3e-96 355.5 214 78.5
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 3.3e-96 355.5 232 75.4
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 5.6e-96 354.8 199 82.4
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 7.3e-96 354.4 238 73.5
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 7.3e-96 354.4 209 79.4
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 2.1e-95 352.8 212 77.4
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 3.6e-95 352.1 236 73.7
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 3.6e-95 352.1 217 77.0
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 3.6e-95 352.1 216 77.3
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 3.6e-95 352.1 240 72.1
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 4.7e-95 351.7 244 71.7
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.1e-94 350.5 235 76.2
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.1e-94 350.5 224 74.6
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 1.4e-94 350.1 193 83.4
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.8e-94 349.7 227 74.4
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.3e-94 349.4 238 76.5
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 3.1e-94 349.0 226 74.3
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 4.0e-94 348.6 216 77.3
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 4.0e-94 348.6 194 82.5
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 6.8e-94 347.8 223 80.3
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 6.8e-94 347.8 226 73.9
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 8.9e-94 347.4 233 71.2
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.2e-93 347.1 196 81.6
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.0e-93 346.3 234 72.2
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 2.6e-93 345.9 240 72.1
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 2.6e-93 345.9 237 70.9
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 3.4e-93 345.5 222 76.6
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 4.4e-93 345.1 240 71.2
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 4.4e-93 345.1 251 68.5
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 5.8e-93 344.7 191 82.7
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 9.8e-93 344.0 243 68.7
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 1.3e-92 343.6 197 80.7
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 1.7e-92 343.2 237 70.9
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.7e-92 343.2 199 79.4
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 2.2e-92 342.8 235 71.1
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 2.2e-92 342.8 200 79.5
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 8.3e-92 340.9 197 81.2
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 8.3e-92 340.9 229 71.6
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 1.1e-91 340.5 200 79.5
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 1.1e-91 340.5 201 78.6
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 1.4e-91 340.1 237 69.6
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.4e-91 339.3 266 69.5
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 5.4e-91 338.2 197 80.2
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 5.4e-91 338.2 240 70.0
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 3.5e-90 335.5 240 69.6
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 2.3e-89 332.8 230 70.4
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 8.6e-89 330.9 193 77.7
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 1.1e-88 330.5 225 72.0
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 1.9e-88 329.7 214 75.2
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 9.5e-88 327.4 191 78.5
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 6.8e-86 321.2 190 78.4
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 7.5e-85 317.8 245 66.1
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 9.9e-85 317.4 191 78.0
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.2e-82 310.5 238 63.9
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 1.6e-82 310.1 185 80.5
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 3.9e-81 305.4 202 73.3
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.1e-79 299.7 196 73.5
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 4.7e-79 298.5 208 73.1
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.8e-78 296.6 199 73.9
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 8.9e-78 294.3 201 72.6
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 1.5e-77 293.5 194 72.2
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.9e-76 289.3 187 70.1
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 8.4e-76 287.7 193 68.9
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 1.9e-75 286.6 200 66.0
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 3.0e-73 279.3 177 70.1
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 2.8e-71 272.7 186 68.3
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 4.9e-68 261.9 196 64.8
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 7.1e-67 258.1 206 65.0
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 5.1e-65 251.9 205 62.4
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.3e-63 247.3 174 71.3
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.4e-59 233.0 147 73.5
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.5e-56 223.8 172 62.8
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 9.0e-54 214.5 223 54.3
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 2.6e-53 213.0 227 57.3
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.4e-53 212.6 246 50.4
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 4.5e-53 212.2 198 52.5
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.7e-52 210.3 137 75.9
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 9.3e-51 204.5 202 55.0
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 6.9e-46 188.3 200 53.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 1.5e-45 187.2 114 74.6
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 1.2e-42 177.6 103 76.7
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 3.3e-40 169.5 105 75.2
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.7e-39 166.0 149 50.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 5.9e-29 132.1 70 87.1
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 2.9e-28 129.8 71 88.7
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 8.5e-12 75.1 52 71.2


User provided reference genes

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