Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.8e-119 432.6 219 100.0
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 8.3e-112 407.1 204 100.0
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.6e-110 402.9 219 91.3
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.6e-110 402.9 219 91.8
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 9.5e-108 393.7 219 90.0
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 5.2e-106 387.9 219 88.6
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 4.4e-105 384.8 247 81.8
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 4.4e-105 384.8 247 81.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.4e-103 379.8 219 87.2
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.3e-101 373.2 220 85.0
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.3e-100 368.6 220 84.1
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 6.2e-99 364.4 219 82.2
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 8.1e-99 364.0 213 83.6
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.4e-98 363.2 218 82.1
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.8e-98 362.8 219 83.6
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 4.0e-98 361.7 210 84.8
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 6.8e-98 360.9 213 84.0
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.5e-97 359.8 219 82.6
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 4.4e-97 358.2 219 83.6
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 9.9e-97 357.1 210 83.3
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.2e-96 355.9 216 80.1
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.9e-96 355.5 218 80.7
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 3.7e-96 355.1 219 81.3
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 4.9e-96 354.8 218 80.7
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 4.9e-96 354.8 219 80.4
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 2.4e-95 352.4 219 79.9
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 4.1e-95 351.7 210 82.4
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.1e-95 351.7 218 79.4
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 9.2e-95 350.5 212 80.7
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.2e-95 350.5 219 80.4
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 9.2e-95 350.5 219 80.4
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.2e-94 350.1 219 79.9
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.6e-94 349.7 218 79.4
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.6e-94 349.7 218 79.4
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.5e-94 348.6 208 82.2
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 3.5e-94 348.6 208 84.1
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 3.5e-94 348.6 218 79.4
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 6.0e-94 347.8 215 80.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.0e-93 347.1 218 78.0
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.0e-93 347.1 219 78.5
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.0e-93 347.1 219 79.5
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.3e-93 346.7 210 81.9
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.3e-93 346.7 219 78.5
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 6.6e-93 344.4 216 79.2
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 8.6e-93 344.0 222 78.4
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 8.6e-93 344.0 211 79.6
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.1e-92 343.6 212 80.2
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 1.1e-92 343.6 212 79.7
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.5e-92 343.2 217 78.3
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.5e-92 343.2 212 80.2
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.5e-92 343.2 219 80.8
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 2.5e-92 342.4 212 79.7
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 3.3e-92 342.0 212 79.7
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 3.3e-92 342.0 212 79.7
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 5.6e-92 341.3 210 80.0
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.6e-92 341.3 213 81.2
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.6e-92 341.3 213 81.2
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 7.3e-92 340.9 212 79.7
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 9.6e-92 340.5 218 77.5
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.2e-91 340.1 218 77.1
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.6e-91 339.7 211 79.6
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 1.6e-91 339.7 211 78.7
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.1e-91 339.3 212 79.7
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 2.8e-91 339.0 217 77.4
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 3.6e-91 338.6 212 77.4
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.2e-91 337.8 207 79.2
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.4e-90 336.7 209 79.9
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 5.2e-90 334.7 209 80.9
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 5.2e-90 334.7 214 76.2
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.5e-89 333.2 213 77.5
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.5e-89 333.2 204 80.9
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 5.8e-89 331.3 196 81.6
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 9.9e-89 330.5 237 71.7
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 2.9e-88 328.9 208 77.4
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 6.4e-88 327.8 238 71.0
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 7.1e-87 324.3 219 77.2
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 7.1e-87 324.3 207 78.3
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.6e-86 323.2 208 76.0
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 2.1e-86 322.8 201 79.1
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 2.1e-86 322.8 219 77.6
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 6.0e-86 321.2 195 82.6
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.3e-85 319.3 206 77.7
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 5.1e-85 318.2 207 75.4
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 5.1e-85 318.2 197 79.2
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.1e-84 317.0 219 76.3
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 1.6e-83 313.2 173 93.1
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.6e-83 312.0 196 78.1
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.4e-82 310.1 219 72.6
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 3.8e-80 302.0 183 79.8
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.5e-76 289.3 214 70.1
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 3.3e-76 288.9 207 68.1
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 4.8e-75 285.0 206 67.5
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 8.1e-75 284.3 170 84.7
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 6.9e-74 281.2 196 74.5
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.2e-72 276.2 219 67.6
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.9e-72 275.0 207 67.1
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.4e-71 273.5 207 67.6
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.3e-69 266.2 202 71.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 4.3e-68 261.9 223 65.0
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.4e-66 256.9 154 87.7
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 2.4e-66 256.1 173 75.1
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.6e-65 252.7 217 62.7
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.6e-59 233.4 143 85.3
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 6.9e-58 228.0 141 78.0
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.9e-56 222.6 138 84.1
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.2e-49 200.7 183 60.1
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 3.2e-47 192.6 113 84.1
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 2.1e-46 189.9 141 69.5
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.0e-45 187.6 120 79.2
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 1.4e-39 167.2 218 49.5
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.0e-37 161.0 108 75.9
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 9.7e-36 154.5 115 70.4
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 2.6e-33 146.4 90 74.4
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 1.7e-32 143.7 204 39.7
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 6.1e-30 135.2 212 38.7
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 8.8e-29 131.3 196 37.2
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 9.1e-26 121.3 101 66.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 1.6e-25 120.6 101 65.3
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 2.3e-21 106.7 81 71.6
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 3.7e-19 99.4 116 50.9
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.6e-17 94.0 90 48.9
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.2e-16 90.1 51 78.4


User provided reference genes

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