Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16623_v3 Cicer arietinum L. HOM05D009035 ORTHO05D011039 8.9e-34 146.4 74 100.0
Lalb_Chr08g0240971 Lupinus albus HOM05D009035 ORTHO05D011039 3.6e-19 97.8 70 70.0
Glyma.14G158750 Glycine max HOM05D009035 ORTHO05D011039 1.8e-18 95.5 70 70.0
Glyma.13G035950 Glycine max HOM05D009035 ORTHO05D011039 2.6e-17 91.7 70 67.1
Lalb_Chr04g0253631 Lupinus albus HOM05D009035 ORTHO05D011039 9.9e-17 89.7 69 72.5
Lalb_Chr11g0066261 Lupinus albus HOM05D009035 ORTHO05D011039 9.9e-17 89.7 71 71.8
COL.COLO4_28339 Corchorus olitorius HOM05D009035 ORTHO05D011039 2.2e-16 88.6 75 64.0
Sabra05G0141100 Salix brachista HOM05D009035 ORTHO05D011039 2.9e-16 88.2 72 69.4
QL09p029860 Quercus lobata HOM05D009035 ORTHO05D011039 4.9e-16 87.4 70 65.7
QL09p030163 Quercus lobata HOM05D009035 ORTHO05D011039 4.9e-16 87.4 70 65.7
Potri.005G184450 Populus trichocarpa HOM05D009035 ORTHO05D011039 1.9e-15 85.5 72 66.7
Gohir.D03G062801 Gossypium hirsutum HOM05D009035 ORTHO05D011039 2.4e-15 85.1 72 66.7
Potri.002G075850 Populus trichocarpa HOM05D009035 ORTHO05D011039 1.0e-13 79.7 72 63.9
Medtr1g029590 Medicago truncatula HOM05D009035 ORTHO05D011039 2.3e-13 78.6 71 62.0
Manes.02G171850 Manihot esculenta HOM05D009035 ORTHO05D011039 6.7e-13 77.0 78 59.0
CiPaw.15G025000 Carya illinoinensis HOM05D009035 ORTHO05D011039 3.3e-12 74.7 64 64.1
Carub.0006s2697 Capsella rubella HOM05D009035 ORTHO05D011039 7.4e-12 73.6 74 60.8
Migut.C01084 Erythranthe guttata HOM05D009035 ORTHO05D011039 7.4e-12 73.6 75 56.0
Oeu045983.1 Olea europaea HOM05D009035 ORTHO05D011039 3.7e-11 71.2 73 56.2
A03p28030 Brassica napus HOM05D009035 ORTHO05D011039 1.1e-10 69.7 74 56.8
CAN.G46.17 Capsicum annuum HOM05D009035 ORTHO05D011039 1.1e-10 69.7 73 57.5
Solyc04g063220.1 Solanum lycopersicum HOM05D009035 ORTHO05D011039 1.1e-10 69.7 76 55.3
DCAR_016721 Daucus carota HOM05D009035 ORTHO05D011039 4.0e-10 67.8 68 48.5
Lsat_1_v5_gn_1_10260 Lactuca sativa HOM05D009035 ORTHO05D011039 5.3e-10 67.4 72 54.2
Sc26g0002810 Simmondsia chinensis HOM05D009035 ORTHO05D011039 6.9e-10 67.0 64 59.4
Migut.C01083 Erythranthe guttata HOM05D009035 ORTHO05D011039 9.0e-10 66.6 72 55.6
Sed0005031 Sechium edule HOM05D009035 ORTHO05D011039 1.2e-09 66.2 65 56.9
C03p33890 Brassica napus HOM05D009035 ORTHO05D011039 2.0e-09 65.5 74 54.1
Sed0013478 Sechium edule HOM05D009035 ORTHO05D011039 5.8e-09 63.9 55 58.2
arahy.Tifrunner.gnm1.ann1.ECT8PE Arachis hypogaea HOM05D009035 ORTHO05D011039 7.6e-09 63.5 69 60.9
EL10Ac1g01393 Beta vulgaris HOM05D009035 ORTHO05D011039 1.0e-08 63.2 63 57.1
EL10Ac8g19780 Beta vulgaris HOM05D009035 ORTHO05D011039 1.3e-08 62.8 63 57.1
CiPaw.16G019900 Carya illinoinensis HOM05D009035 ORTHO05D011039 2.9e-08 61.6 72 52.8
ClCG11G008460 Citrullus lanatus HOM05D009035 ORTHO05D011039 2.9e-08 61.6 67 52.2
CsaV3_7G022120 Cucumis sativus L. HOM05D009035 ORTHO05D011039 2.9e-08 61.6 67 50.7
Peaxi162Scf00066g00086 Petunia axillaris HOM05D009035 ORTHO05D011039 1.4e-07 59.3 55 63.6
Nn1g08927 Nelumbo nucifera HOM05D009035 ORTHO05D011039 7.9e-06 53.5 54 57.4


User provided reference genes

Program Settings