Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 1.5e-143 513.1 298 100.0
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 6.1e-65 251.9 310 62.6
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 1.0e-64 251.1 307 68.4
Psat0s3071g0240 Pisum sativum HOM05D007988 ORTHO05D009824 2.6e-55 219.9 220 67.3
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 1.0e-48 198.0 344 56.7
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 2.3e-48 196.8 340 54.7
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 1.3e-46 191.0 346 53.2
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 4.5e-44 182.6 340 53.2
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 1.0e-40 171.4 334 53.6
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 2.3e-40 170.2 314 51.0
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 9.5e-34 148.3 335 49.9
CiPaw.16G021200 Carya illinoinensis HOM05D007988 ORTHO05D009824 2.3e-32 143.7 336 49.1
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 3.0e-32 143.3 331 47.4
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 5.2e-32 142.5 315 47.0
arahy.Tifrunner.gnm1.ann1.GX31L7 Arachis hypogaea HOM05D007988 ORTHO05D009824 1.5e-31 141.0 332 49.1
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 2.6e-31 140.2 335 48.7
arahy.Tifrunner.gnm1.ann1.1JY9DA Arachis hypogaea HOM05D007988 ORTHO05D009824 1.3e-30 137.9 332 48.5
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 1.3e-30 137.9 335 46.3
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 1.3e-30 137.9 333 45.3
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 1.3e-30 137.9 327 48.6
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 2.9e-30 136.7 322 45.3
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 2.9e-30 136.7 328 45.1
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 1.1e-29 134.8 329 46.5
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 3.2e-29 133.3 331 43.8
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 1.6e-28 131.0 334 47.6
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 2.0e-28 130.6 330 44.5
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 5.9e-28 129.0 336 42.3
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 5.9e-28 129.0 336 42.3
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 3.9e-27 126.3 333 46.5
FAN27G1764 Fragaria x ananassa HOM05D007988 ORTHO05D009824 5.0e-27 125.9 324 43.2
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 3.3e-26 123.2 325 37.2
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 1.6e-25 120.9 336 42.9
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 4.7e-25 119.4 333 37.8
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 6.2e-25 119.0 335 41.5
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 1.0e-24 118.2 329 38.6
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 4.0e-24 116.3 324 45.4
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 6.8e-24 115.5 314 41.7
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 3.4e-23 113.2 330 40.0
Cpa.g.sc64.159 Carica papaya HOM05D007988 ORTHO05D009824 7.5e-23 112.1 338 42.9
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 1.7e-22 110.9 330 45.8
CANSAT25G2204 Cannabis sativa HOM05D007988 ORTHO05D009824 1.1e-21 108.2 374 32.1
Eucgr.F02525 Eucalyptus grandis HOM05D007988 ORTHO05D009824 1.1e-21 108.2 342 40.4
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 1.9e-21 107.5 327 40.1
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 4.1e-21 106.3 331 40.5
Lalb_Chr08g0240981 Lupinus albus HOM05D007988 ORTHO05D009824 4.1e-21 106.3 190 47.4
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 1.6e-20 104.4 310 41.0
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 2.0e-20 104.0 212 42.0
Nn5g28477 Nelumbo nucifera HOM05D007988 ORTHO05D009824 6.6e-19 99.0 323 45.2
Lalb_Chr04g0253601 Lupinus albus HOM05D007988 ORTHO05D009824 4.3e-18 96.3 168 48.8
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 7.3e-18 95.5 338 41.4
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 2.8e-17 93.6 340 33.2
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 3.1e-16 90.1 350 36.6
Nn1g08990 Nelumbo nucifera HOM05D007988 ORTHO05D009824 3.1e-16 90.1 336 33.9
EL10Ac1g01385 Beta vulgaris HOM05D007988 ORTHO05D009824 4.4e-15 86.3 370 39.5
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 5.8e-15 85.9 296 43.6
MBI06_g32176_MAGBIO Magnolia biondii HOM05D007988 ORTHO05D009824 2.2e-14 84.0 349 37.5
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 2.2e-14 84.0 307 34.2
Migut.C01082 Erythranthe guttata HOM05D007988 ORTHO05D009824 2.9e-14 83.6 329 35.0
AUR62007686 Chenopodium quinoa HOM05D007988 ORTHO05D009824 8.3e-14 82.0 239 36.4
A06p17540 Brassica napus HOM05D012069 ORTHO05D009824 1.1e-13 81.6 338 34.6
MELO3C008455.2 Cucumis melo HOM05D007988 ORTHO05D009824 1.1e-13 81.6 314 39.2
Sed0016946 Sechium edule HOM05D007988 ORTHO05D009824 1.1e-13 81.6 303 30.4
Sopen04g026140 Solanum pennellii HOM05D007988 ORTHO05D009824 1.9e-13 80.9 348 38.2
BraA06t24850Z Brassica rapa HOM05D012069 ORTHO05D009824 4.1e-13 79.7 338 34.3
HanXRQChr09g0256671 Helianthus annuus HOM05D007988 ORTHO05D009824 5.4e-13 79.3 304 33.9
Carub.0001s2093 Capsella rubella HOM05D012069 ORTHO05D009824 7.1e-13 79.0 341 33.4
AL1G34650 Arabidopsis lyrata HOM05D012069 ORTHO05D009824 9.2e-13 78.6 343 30.6
Sp1g19040 Schrenkiella parvula HOM05D012069 ORTHO05D009824 7.8e-12 75.5 333 36.0
CsaV3_6G031310 Cucumis sativus L. HOM05D007988 ORTHO05D009824 1.7e-11 74.3 279 39.8
AT1G21510 Arabidopsis thaliana HOM05D012069 ORTHO05D009824 3.9e-11 73.2 343 32.4
THA.LOC104813286 Tarenaya hassleriana HOM05D012069 ORTHO05D009824 1.1e-10 71.6 340 33.2
ClCG08G006150 Citrullus lanatus HOM05D007988 ORTHO05D009824 1.5e-10 71.2 315 40.0
Sed0000785 Sechium edule HOM05D007988 ORTHO05D009824 1.5e-10 71.2 174 42.0
DCAR_003597 Daucus carota HOM05D007988 ORTHO05D009824 1.9e-10 70.9 327 39.4
ECA232G2067 Erigeron canadensis HOM05D007988 ORTHO05D009824 1.9e-10 70.9 314 39.2
FAN20G0590 Fragaria x ananassa HOM05D007988 ORTHO05D009824 7.3e-10 68.9 175 41.1
CARHR021870 Cardamine hirsuta HOM05D012069 ORTHO05D009824 3.6e-09 66.6 340 30.3
BcaB07g32147 Brassica carinata HOM05D012069 ORTHO05D009824 6.2e-09 65.9 355 31.8
PGSC0003DMG400002385 Solanum tuberosum HOM05D007988 ORTHO05D009824 1.4e-08 64.7 186 36.6
Thhalv10009526m.g Eutrema salsugineum HOM05D012069 ORTHO05D009824 4.0e-08 63.2 356 34.8
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 2.6e-07 60.5 198 37.4
BcaC05g26060 Brassica carinata HOM05D012069 ORTHO05D009824 2.2e-06 57.4 343 32.1
BolC5t30735H Brassica oleracea HOM05D012069 ORTHO05D009824 2.2e-06 57.4 343 32.1
C05p20410 Brassica napus HOM05D012069 ORTHO05D009824 4.9e-06 56.2 343 31.8


User provided reference genes

Program Settings