Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 1.8e-78 295.8 143 100.0
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 1.8e-54 216.1 143 73.4
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 7.0e-51 204.1 146 70.5
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 1.7e-49 199.5 146 71.2
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 5.0e-49 198.0 144 72.9
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 8.3e-44 180.6 149 65.1
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 1.8e-43 179.5 142 65.5
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.0e-41 173.7 144 65.3
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 1.0e-41 173.7 142 64.1
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 3.5e-34 148.7 156 55.8
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 9.5e-32 140.6 158 53.2
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.1e-31 139.4 159 52.2
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 3.5e-26 122.1 140 52.9
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 6.0e-26 121.3 166 45.8
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 6.6e-25 117.9 160 46.2
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 1.5e-24 116.7 140 46.4
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 2.5e-24 115.9 140 47.1
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 4.3e-24 115.2 156 47.4
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 4.3e-24 115.2 166 45.8
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 3.6e-23 112.1 158 42.4
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 6.2e-23 111.3 164 42.7
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 6.2e-23 111.3 165 42.4
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 1.4e-22 110.2 164 43.3
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.4e-22 110.2 164 43.3
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 2.3e-22 109.4 162 42.6
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.1e-22 109.0 163 43.6
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 5.2e-22 108.2 158 43.7
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 6.8e-22 107.8 164 43.9
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 6.8e-22 107.8 194 39.2
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.5e-21 106.7 164 42.1
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 4.4e-21 105.1 164 43.3
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 7.5e-21 104.4 160 43.1
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 2.2e-20 102.8 163 42.9
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 2.9e-20 102.4 162 43.2
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 4.9e-20 101.7 153 40.5
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 6.4e-20 101.3 183 38.3
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 6.4e-20 101.3 159 42.8
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 4.1e-19 98.6 162 42.6
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 7.0e-19 97.8 161 41.6
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 1.2e-18 97.1 159 43.4
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.1e-18 96.3 165 41.8
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 4.6e-18 95.1 167 43.1
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 4.6e-18 95.1 173 37.0
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 4.6e-18 95.1 173 37.0
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.0e-17 94.0 173 36.4
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 1.3e-17 93.6 176 38.6
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 1.7e-17 93.2 173 35.8
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 1.7e-17 93.2 168 37.5
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 3.0e-17 92.4 167 40.7
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 6.6e-17 91.3 165 39.4
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 1.9e-16 89.7 150 42.7
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 2.5e-16 89.4 164 38.4
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 1.2e-15 87.0 135 41.5
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.8e-15 85.9 162 38.3
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 3.6e-15 85.5 165 37.6
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 6.2e-15 84.7 183 36.1
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 6.2e-15 84.7 162 37.0
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 6.2e-15 84.7 165 37.6
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 8.1e-15 84.3 168 37.5
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 1.4e-14 83.6 130 44.6
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 2.3e-14 82.8 151 40.4
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 3.1e-14 82.4 149 40.3
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 4.0e-14 82.0 150 40.7
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 5.2e-14 81.6 127 41.7
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 2.0e-13 79.7 140 37.1
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 4.4e-13 78.6 145 37.9
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 7.5e-13 77.8 148 39.9
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 1.7e-12 76.6 175 34.3
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 4.9e-12 75.1 129 35.7
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 1.1e-11 73.9 196 32.7
THA.LOC104800214 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 1.4e-11 73.6 118 41.5
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 3.2e-11 72.4 141 40.4
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 5.4e-11 71.6 131 35.1
Ah.03g139000 Amaranthus hybridus HOM05D007332 ORTHO05D009297 4.6e-10 68.6 134 37.3
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 1.0e-09 67.4 192 29.2
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 1.7e-09 66.6 199 28.6
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 1.7e-09 66.6 199 28.6
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 2.3e-09 66.2 198 29.8
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 2.3e-09 66.2 199 28.6
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 3.0e-09 65.9 121 34.7
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 3.0e-09 65.9 177 32.2
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 3.0e-09 65.9 199 28.6
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 3.0e-09 65.9 177 32.2
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 6.6e-09 64.7 203 28.1
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 1.9e-08 63.2 194 28.4
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 1.9e-08 63.2 194 28.9
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 5.6e-08 61.6 141 34.8
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 8.1e-07 57.8 149 33.6
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 1.4e-06 57.0 186 28.0
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 4.0e-06 55.5 136 31.6
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 8.9e-06 54.3 188 28.2
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 8.9e-06 54.3 190 28.9


User provided reference genes

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