Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.3e-222 776.2 417 100.0
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.7e-222 775.8 416 100.0
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 3.6e-196 688.3 416 90.6
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 3.0e-195 685.3 417 86.3
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 5.9e-191 671.0 417 86.3
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 7.2e-189 664.1 414 85.0
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 1.6e-188 662.9 414 86.0
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 3.9e-187 658.3 414 85.3
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 1.2e-180 636.7 365 88.5
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 2.1e-180 636.0 434 82.5
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 2.1e-180 636.0 435 80.7
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 4.7e-180 634.8 416 78.1
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 6.1e-180 634.4 383 82.5
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 8.0e-180 634.0 435 80.9
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.3e-179 632.5 416 77.9
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 2.3e-179 632.5 363 87.3
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 8.8e-179 630.6 435 75.2
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 8.8e-179 630.6 432 76.9
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 8.8e-179 630.6 417 83.7
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 1.1e-178 630.2 408 85.3
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 2.6e-178 629.0 435 77.2
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 2.6e-178 629.0 417 79.4
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 3.3e-178 628.6 365 85.2
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 3.3e-178 628.6 365 87.4
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 5.7e-178 627.9 433 82.0
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.3e-177 626.7 435 74.7
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.3e-177 626.7 365 84.7
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.2e-177 625.9 433 76.0
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 2.8e-177 625.5 419 78.5
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 6.3e-177 624.4 411 84.4
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 6.3e-177 624.4 428 77.3
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 6.3e-177 624.4 428 81.1
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 1.4e-176 623.2 430 75.8
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 1.4e-176 623.2 430 75.8
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 1.4e-176 623.2 362 87.0
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.8e-176 622.9 426 75.4
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.8e-176 622.9 413 83.3
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 2.4e-176 622.5 363 84.3
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 3.1e-176 622.1 426 77.2
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 3.1e-176 622.1 321 95.3
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 4.1e-176 621.7 372 90.1
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 4.1e-176 621.7 407 78.9
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 5.3e-176 621.3 430 75.6
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 5.3e-176 621.3 417 80.6
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 7.0e-176 620.9 433 76.9
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 9.1e-176 620.5 400 82.5
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 9.1e-176 620.5 419 82.1
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 1.2e-175 620.2 413 78.7
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.2e-175 620.2 426 76.3
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 1.6e-175 619.8 413 82.3
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 1.6e-175 619.8 365 85.2
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 2.7e-175 619.0 430 80.2
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 3.5e-175 618.6 434 74.7
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 3.5e-175 618.6 398 80.7
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.5e-175 618.2 363 84.0
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 5.9e-175 617.8 434 75.3
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 5.9e-175 617.8 365 87.1
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 5.9e-175 617.8 435 75.4
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 7.7e-175 617.5 385 87.0
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.0e-174 617.1 387 83.2
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.0e-174 617.1 365 83.6
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 1.3e-174 616.7 429 77.2
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 1.3e-174 616.7 365 86.0
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 1.3e-174 616.7 376 82.2
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 2.2e-174 615.9 432 75.9
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 3.8e-174 615.1 454 75.3
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 3.8e-174 615.1 365 86.3
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 3.8e-174 615.1 385 85.5
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 3.8e-174 615.1 411 81.5
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 5.0e-174 614.8 414 77.5
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 8.5e-174 614.0 430 74.7
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 8.5e-174 614.0 433 76.2
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 8.5e-174 614.0 433 75.8
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 8.5e-174 614.0 433 75.8
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 2.5e-173 612.5 404 79.5
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 3.2e-173 612.1 433 76.2
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 9.4e-173 610.5 404 79.2
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 1.2e-172 610.1 427 73.8
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.7e-172 609.0 431 75.4
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.7e-172 609.0 365 85.2
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 3.6e-172 608.6 433 75.1
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 8.0e-172 607.4 431 77.3
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 2.0e-170 602.8 440 73.4
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 2.6e-170 602.4 402 74.6
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 4.4e-170 601.7 321 91.0
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 4.4e-170 601.7 367 88.8
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 1.3e-169 600.1 405 78.8
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.2e-169 599.4 367 88.3
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 6.3e-169 597.8 367 88.3
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 1.4e-168 596.7 365 88.2
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.4e-168 596.7 365 88.2
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.8e-168 596.3 399 80.5
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 4.1e-168 595.1 320 90.0
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 9.1e-168 594.0 367 81.7
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.2e-164 583.6 416 77.2
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 3.0e-163 578.9 382 77.5
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 3.0e-163 578.9 358 80.7
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 7.5e-162 574.3 433 76.0
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 7.5e-162 574.3 433 76.0
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.3e-161 573.5 314 87.9
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 1.7e-161 573.2 430 73.0
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 7.7e-159 564.3 365 77.8
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 7.7e-159 564.3 365 78.6
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 2.8e-156 555.8 360 76.7
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 2.8e-156 555.8 363 75.2
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 1.3e-153 547.0 360 73.9
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 4.9e-153 545.0 436 70.6
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 8.3e-153 544.3 390 70.5
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.4e-152 543.5 367 73.6
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 3.2e-152 542.3 389 77.9
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 3.0e-150 535.8 365 79.2
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 3.9e-150 535.4 410 67.3
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 7.3e-149 531.2 338 76.9
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 1.4e-147 526.9 445 70.8
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 6.4e-145 518.1 283 88.7
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.7e-137 492.3 318 75.5
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 5.4e-136 488.4 309 78.0
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.6e-135 486.9 309 78.0
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 7.8e-135 484.6 320 74.4
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.3e-134 483.0 320 74.7
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 3.0e-134 482.6 320 74.1
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 5.1e-134 481.9 320 73.8
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 3.3e-133 479.2 320 74.4
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.2e-132 477.2 366 72.1
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 3.6e-132 475.7 318 73.9
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 3.6e-132 475.7 318 73.9
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 3.6e-132 475.7 318 73.9
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 8.1e-132 474.6 320 73.8
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 1.5e-130 470.3 318 76.1
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 3.4e-130 469.2 320 72.5
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 1.3e-129 467.2 320 72.2
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 4.9e-129 465.3 350 76.3
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 2.5e-117 426.4 323 64.7
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 4.3e-117 425.6 328 62.2
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.4e-115 420.6 282 74.8
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 7.6e-114 414.8 312 64.7
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 2.1e-108 396.7 273 75.5
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 1.4e-107 394.0 224 87.1
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 2.2e-97 360.1 255 74.5
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.6e-95 354.0 330 62.1
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 3.3e-93 346.3 272 72.1
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.1e-75 288.1 234 65.4
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.4e-69 266.2 185 72.4
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 4.1e-67 259.6 249 57.0
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 1.8e-59 234.2 270 47.0
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 2.1e-55 220.7 123 83.7
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 7.0e-51 205.7 293 44.4
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.9e-49 200.3 303 39.3
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 1.4e-46 191.4 160 61.2
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 1.4e-46 191.4 101 87.1
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 3.0e-46 190.3 148 67.6
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 1.3e-44 184.9 101 84.2
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 2.8e-44 183.7 104 86.5
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 3.7e-44 183.3 160 59.4
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.1e-43 179.9 100 88.0
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 2.9e-41 173.7 150 60.0
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 2.5e-40 170.6 100 80.0
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 2.9e-36 157.1 156 51.9
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 1.4e-35 154.8 212 40.1
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.4e-35 154.8 77 87.0
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 9.2e-35 152.1 156 51.9
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 9.2e-35 152.1 122 67.2
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.6e-34 149.8 76 86.8
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 3.0e-33 147.1 135 59.3
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 9.5e-32 142.1 176 53.4
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.9e-28 129.8 72 90.3
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.8e-23 114.0 74 77.0
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 1.3e-20 105.1 126 54.0
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 1.3e-20 105.1 126 54.0
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 2.2e-20 104.4 106 53.8
Psat5g087760 Pisum sativum HOM05D003910 ORTHO05D004622 2.4e-14 84.3 70 68.6
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 3.4e-13 80.5 49 81.6
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.2e-12 77.8 53 67.9
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 8.4e-12 75.9 210 31.9
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.6e-10 70.1 42 81.0
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 5.1e-09 66.6 59 61.0
Psat1g013080 Pisum sativum HOM05D003910 ORTHO05D323649 1.9e-08 64.7 69 58.0


User provided reference genes

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