Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 8.4e-157 557.0 282 100.0
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 2.7e-131 472.2 278 85.3
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.3e-130 469.9 278 83.8
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 4.0e-127 458.4 276 84.8
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.7e-120 435.3 282 79.8
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 2.7e-115 419.1 278 78.4
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 4.6e-115 418.3 278 78.4
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 4.6e-115 418.3 278 78.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 3.3e-113 412.1 276 75.4
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 6.9e-111 404.4 280 73.2
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 2.0e-110 402.9 280 72.9
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.0e-106 390.6 275 71.3
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 8.8e-106 387.5 276 72.1
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 5.7e-105 384.8 273 69.6
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 5.7e-105 384.8 281 69.0
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.7e-104 383.3 276 68.8
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.4e-103 380.2 269 71.4
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 4.1e-103 378.6 268 71.3
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 5.3e-103 378.3 275 70.9
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 1.5e-102 376.7 277 69.0
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 2.6e-102 375.9 268 69.8
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 7.7e-102 374.4 273 70.7
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.3e-101 373.6 276 67.0
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.3e-101 373.6 276 67.8
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.7e-101 373.2 275 66.2
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 2.2e-101 372.9 273 70.7
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.2e-101 372.9 273 70.7
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 2.2e-101 372.9 267 71.9
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 2.9e-101 372.5 278 70.5
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 5.0e-101 371.7 278 69.4
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.5e-100 369.4 273 70.3
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 3.2e-100 369.0 269 70.3
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 3.2e-100 369.0 266 69.5
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 4.2e-100 368.6 282 67.7
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 5.5e-100 368.2 282 67.4
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 9.4e-100 367.5 278 68.7
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 1.2e-99 367.1 276 68.1
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.2e-99 367.1 279 67.7
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 1.6e-99 366.7 276 67.4
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 1.6e-99 366.7 270 70.0
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 3.6e-99 365.5 269 68.8
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 3.6e-99 365.5 269 68.8
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 8.0e-99 364.4 276 67.4
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 8.0e-99 364.4 274 68.2
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.0e-98 362.5 273 67.4
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 5.2e-98 361.7 273 67.4
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 6.7e-98 361.3 271 68.3
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 6.7e-98 361.3 277 67.1
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 8.8e-98 360.9 273 67.0
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.5e-97 360.1 274 66.8
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.5e-97 360.1 274 66.8
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 2.6e-97 359.4 280 67.9
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 3.3e-97 359.0 277 65.3
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 4.4e-97 358.6 276 66.7
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 7.4e-97 357.8 276 67.4
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 7.4e-97 357.8 276 66.7
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.3e-96 357.1 266 69.2
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.7e-96 356.7 262 68.7
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.7e-96 356.7 280 66.8
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 8.2e-96 354.4 345 57.1
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 2.4e-95 352.8 276 63.4
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 2.4e-95 352.8 268 69.0
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.1e-95 352.4 285 64.9
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 2.0e-94 349.7 268 66.4
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 5.0e-93 345.1 279 65.6
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.1e-92 344.0 268 66.0
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 7.2e-92 341.3 274 63.1
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 9.4e-92 340.9 274 65.3
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 3.6e-91 339.0 260 67.7
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.3e-90 336.3 270 67.0
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 4.0e-90 335.5 265 67.9
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.0e-89 333.2 267 67.4
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 4.4e-89 332.0 277 64.3
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 4.4e-89 332.0 281 64.1
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 9.8e-89 330.9 278 63.3
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.7e-88 330.1 281 63.7
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.7e-88 330.1 281 63.7
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.4e-87 327.0 277 65.0
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.4e-87 326.2 278 65.5
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 5.4e-87 325.1 277 63.5
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 9.1e-87 324.3 268 63.1
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.6e-86 323.6 281 62.6
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 5.9e-86 321.6 261 64.0
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.0e-85 320.9 263 63.9
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 6.5e-85 318.2 261 63.2
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 3.2e-84 315.8 261 63.6
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 8.8e-82 307.8 272 56.6
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 1.3e-80 303.9 267 59.9
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.8e-79 300.1 266 59.4
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 6.1e-75 285.0 193 71.0
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 6.8e-74 281.6 178 80.9
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.9e-72 275.4 179 76.5
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 1.4e-71 273.9 182 73.6
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 6.6e-69 265.0 179 73.7
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.3e-61 240.7 170 71.8
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.1e-60 237.7 137 80.3
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 2.1e-59 233.4 173 68.8
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 3.1e-58 229.6 265 48.3
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 2.1e-54 216.9 272 46.7
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 2.7e-54 216.5 177 62.7
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 3.9e-53 212.6 269 46.1
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.0e-45 188.0 265 43.8
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.0e-45 186.4 152 59.9
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 5.1e-45 185.7 261 47.1
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 6.6e-45 185.3 155 61.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 6.4e-40 168.7 277 40.4
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 9.3e-31 138.3 275 34.5
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 5.1e-29 132.5 137 54.7
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 8.7e-29 131.7 78 78.2
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 1.8e-26 124.0 93 64.5
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 9.9e-25 118.2 164 40.2
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.1e-19 100.5 173 41.0
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 4.8e-19 99.4 79 65.8
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.0e-18 96.3 65 69.2
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 8.4e-16 88.6 274 30.7
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.0e-14 82.4 140 39.3
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 2.4e-10 70.5 79 54.4


User provided reference genes

Program Settings