Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16533_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 2.8e-114 415.2 200 100.0
Ca_16531_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 9.6e-107 390.2 194 96.9
Ca_16532_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.3e-106 389.8 194 96.4
Ca_16530_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.6e-106 389.4 194 96.4
Medtr3g087280 Medicago truncatula HOM05D003474 ORTHO05D003971 9.3e-94 347.1 200 82.0
TPR.G17847 Trifolium pratense HOM05D003474 ORTHO05D003971 1.1e-91 340.1 200 81.0
TPR.G17845 Trifolium pratense HOM05D003474 ORTHO05D003971 9.7e-91 337.0 200 80.5
Medtr3g087275 Medicago truncatula HOM05D003474 ORTHO05D003971 3.1e-89 332.0 200 81.5
TPR.G17834 Trifolium pratense HOM05D003474 ORTHO05D003971 9.0e-89 330.5 200 79.0
TPR.G17848 Trifolium pratense HOM05D003474 ORTHO05D003971 2.6e-88 328.9 194 80.9
Psat5g089920 Pisum sativum HOM05D003474 ORTHO05D003971 5.9e-88 327.8 200 78.0
Medtr3g087278 Medicago truncatula HOM05D003474 ORTHO05D003971 2.5e-86 322.4 200 76.5
Psat5g089840 Pisum sativum HOM05D003474 ORTHO05D003971 2.1e-85 319.3 193 79.8
Medtr3g087270 Medicago truncatula HOM05D003474 ORTHO05D003971 7.9e-85 317.4 200 75.0
Medtr3g087325 Medicago truncatula HOM05D003474 ORTHO05D003971 1.1e-83 313.5 200 76.0
Medtr3g087330 Medicago truncatula HOM05D003474 ORTHO05D003971 1.9e-83 312.8 200 74.5
Psat5g089720 Pisum sativum HOM05D003474 ORTHO05D003971 4.3e-83 311.6 200 75.5
TPR.G17829 Trifolium pratense HOM05D003474 ORTHO05D003971 4.3e-83 311.6 200 74.5
Psat5g089880 Pisum sativum HOM05D003474 ORTHO05D003971 1.6e-82 309.7 193 78.2
TPR.G17835 Trifolium pratense HOM05D003474 ORTHO05D003971 1.0e-79 300.4 200 74.0
Psat5g089800 Pisum sativum HOM05D003474 ORTHO05D003971 4.2e-78 295.0 193 73.6
Glyma.18G017500 Glycine max HOM05D003474 ORTHO05D003971 1.3e-66 256.9 203 64.5
Glyma.11G239900 Glycine max HOM05D003474 ORTHO05D003971 5.3e-65 251.5 204 63.2
TPR.G17838 Trifolium pratense HOM05D003474 ORTHO05D003971 5.0e-63 245.0 200 62.5
VMungo1383G0909 Vigna mungo HOM05D003474 ORTHO05D003971 1.2e-59 233.8 193 61.1
Lj6g0005521 Lotus japonicus HOM05D003474 ORTHO05D003971 2.0e-59 233.0 199 61.3
Lalb_Chr23g0277351 Lupinus albus HOM05D003474 ORTHO05D003971 2.0e-59 233.0 200 63.5
Medtr3g087300 Medicago truncatula HOM05D003474 ORTHO05D003971 3.3e-59 232.3 197 62.9
Lj6g0012852 Lotus japonicus HOM05D003474 ORTHO05D003971 1.4e-57 226.9 200 60.5
Lj6g0019645 Lotus japonicus HOM05D003474 ORTHO05D003971 1.8e-57 226.5 206 59.7
Lalb_Chr08g0231081 Lupinus albus HOM05D003474 ORTHO05D003971 1.3e-55 220.3 190 65.3
Lalb_Chr08g0231071 Lupinus albus HOM05D003474 ORTHO05D003971 6.5e-55 218.0 200 60.5
Phvul.001G251900 Phaseolus vulgaris HOM05D003474 ORTHO05D003971 1.4e-49 200.3 165 63.0
CiPaw.04G099000 Carya illinoinensis HOM05D003474 ORTHO05D003971 4.1e-41 172.2 191 47.6
FvH4_1g20980 Fragaria vesca HOM05D003474 ORTHO05D003971 2.9e-39 166.0 196 46.9
FAN23G2065 Fragaria x ananassa HOM05D003474 ORTHO05D003971 2.9e-39 166.0 196 46.9
FAN19G2364 Fragaria x ananassa HOM05D003474 ORTHO05D003971 1.1e-38 164.1 196 46.4
FAN28G0803 Fragaria x ananassa HOM05D003474 ORTHO05D003971 3.3e-38 162.5 196 45.4
QL06p049587 Quercus lobata HOM05D003474 ORTHO05D003971 4.3e-38 162.2 195 45.6
QL06p049633 Quercus lobata HOM05D003474 ORTHO05D003971 4.3e-38 162.2 195 46.7
Sabra07G0076200 Salix brachista HOM05D003474 ORTHO05D003971 4.3e-38 162.2 197 44.7
Sabra07G0076300 Salix brachista HOM05D003474 ORTHO05D003971 4.3e-38 162.2 197 44.7
QL06p049618 Quercus lobata HOM05D003474 ORTHO05D003971 5.6e-38 161.8 195 46.2
Prupe.6G186100 Prunus persica HOM05D003474 ORTHO05D003971 7.3e-38 161.4 210 46.2
Sabra07G0075900 Salix brachista HOM05D003474 ORTHO05D003971 9.5e-38 161.0 197 44.7
Sabra07G0076000 Salix brachista HOM05D003474 ORTHO05D003971 9.5e-38 161.0 197 44.7
RcHm_v2.0_Chr2g0114461 Rosa chinensis HOM05D003474 ORTHO05D003971 1.2e-37 160.6 195 44.1
Potri.007G092300 Populus trichocarpa HOM05D003474 ORTHO05D003971 1.6e-37 160.2 197 45.7
FAN26G3130 Fragaria x ananassa HOM05D003474 ORTHO05D003971 6.1e-37 158.3 196 46.4
Sabra07G0076100 Salix brachista HOM05D003474 ORTHO05D003971 6.1e-37 158.3 197 44.2
Thecc.01G102400 Theobroma cacao HOM05D003474 ORTHO05D003971 1.0e-36 157.5 201 44.8
RcHm_v2.0_Chr2g0114471 Rosa chinensis HOM05D003474 ORTHO05D003971 8.9e-36 154.5 197 43.7
Cfa002670 Carpinus fangiana HOM05D003474 ORTHO05D003971 1.2e-35 154.1 200 43.5
Ciclev10027277m.g Citrus clementina HOM05D003474 ORTHO05D003971 3.4e-35 152.5 199 43.7
Gohir.A11G201900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 7.5e-35 151.4 201 44.8
QL06p049593 Quercus lobata HOM05D003474 ORTHO05D003971 1.7e-34 150.2 195 44.1
COL.COLO4_09957 Corchorus olitorius HOM05D003474 ORTHO05D003971 1.1e-33 147.5 204 44.6
Duzib187G1721 Durio zibethinus HOM05D003474 ORTHO05D003971 1.4e-33 147.1 200 47.0
Gorai.007G239100 Gossypium raimondii HOM05D003474 ORTHO05D003971 1.8e-33 146.7 198 45.5
Lj4P889T19 Lonicera japonica HOM05D003474 ORTHO05D003971 1.8e-33 146.7 203 40.9
Gohir.D11G221900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 3.2e-33 146.0 201 44.8
Hma1.2p1_0047F.1_g027910 Hydrangea macrophylla HOM05D003474 ORTHO05D003971 3.2e-33 146.0 197 43.1
Nn1g05334 Nelumbo nucifera HOM05D003474 ORTHO05D003971 3.2e-33 146.0 200 42.0
Potri.005G076100 Populus trichocarpa HOM05D003474 ORTHO05D003971 7.0e-33 144.8 195 43.6
CSS0038157 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 3.5e-32 142.5 205 41.5
TAR381G0511 Trochodendron aralioides HOM05D003474 ORTHO05D003971 4.6e-32 142.1 197 42.1
PGSC0003DMG400001891 Solanum tuberosum HOM05D003474 ORTHO05D003971 7.8e-32 141.4 202 41.6
Sed0016843 Sechium edule HOM05D003474 ORTHO05D003971 3.9e-31 139.0 204 40.7
Duzib147G1557 Durio zibethinus HOM05D003474 ORTHO05D003971 6.6e-31 138.3 197 45.2
CiPaw.03G141500 Carya illinoinensis HOM05D003474 ORTHO05D003971 1.5e-30 137.1 199 40.7
Haze_24940 Corylus avellana HOM05D003474 ORTHO05D003971 1.9e-30 136.7 169 42.0
Nn5g30135 Nelumbo nucifera HOM05D003474 ORTHO05D003971 2.5e-30 136.3 206 38.3
CAN.G441.1 Capsicum annuum HOM05D003474 ORTHO05D003971 4.3e-30 135.6 199 41.7
CsaV3_6G045460 Cucumis sativus L. HOM05D003474 ORTHO05D003971 4.3e-30 135.6 192 41.1
Cc07_g15300 Coffea canephora HOM05D003474 ORTHO05D003971 1.2e-29 134.0 196 41.3
Aqoxy6G00810 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 1.6e-29 133.7 195 40.5
Manes.12G135500 Manihot esculenta HOM05D003474 ORTHO05D003971 2.1e-29 133.3 207 40.1
Peaxi162Scf00611g00012 Petunia axillaris HOM05D003474 ORTHO05D003971 4.7e-29 132.1 209 38.3
CSS0039995 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 6.2e-29 131.7 208 38.5
CSS0044421 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 6.2e-29 131.7 211 38.4
TWI74G0170 Tripterygium wilfordii HOM05D003474 ORTHO05D003971 6.2e-29 131.7 205 40.5
Oeu056606.1 Olea europaea HOM05D003474 ORTHO05D003971 1.1e-28 131.0 202 41.1
TAR625G0209 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.4e-28 130.6 210 41.4
CSS0002095 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 2.3e-28 129.8 211 37.9
Atru.chr4.70 Acer truncatum HOM05D003474 ORTHO05D003971 5.2e-28 128.6 235 38.7
ClCG01G018800 Citrullus lanatus HOM05D003474 ORTHO05D003971 6.8e-28 128.3 208 35.1
Oeu002403.1 Olea europaea HOM05D003474 ORTHO05D003971 6.8e-28 128.3 196 39.8
Eucgr.I00429 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.5e-27 127.1 217 37.8
Eucgr.I00430 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.5e-27 127.1 217 37.8
Nitab4.5_0000104g0070 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.6e-27 126.3 188 37.2
CSS0009549 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 3.4e-27 125.9 211 37.4
Nitab4.5_0000104g0120 Nicotiana tabacum HOM05D003474 ORTHO05D003971 4.4e-27 125.6 185 38.9
TAR625G1533 Trochodendron aralioides HOM05D003474 ORTHO05D003971 7.5e-27 124.8 208 42.3
Cfa002671 Carpinus fangiana HOM05D003474 ORTHO05D003971 1.3e-26 124.0 198 38.9
Sopen03g021520 Solanum pennellii HOM05D003474 ORTHO05D003971 1.7e-26 123.6 207 34.3
Aqoxy6G00809 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 2.2e-26 123.2 192 35.9
Cpa.g.sc213.15 Carica papaya HOM05D003474 ORTHO05D003971 8.3e-26 121.3 199 39.2
PSO781G0183 Papaver somniferum HOM05D003474 ORTHO05D003971 1.4e-25 120.6 197 37.6
Solyc03g078620.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 1.4e-25 120.6 212 34.4
THA.LOC104804926 Tarenaya hassleriana HOM05D003474 ORTHO05D003971 1.9e-25 120.2 181 35.4
PGSC0003DMG400021798 Solanum tuberosum HOM05D003474 ORTHO05D003971 2.4e-25 119.8 211 35.5
CANSAT73G0001 Cannabis sativa HOM05D003474 ORTHO05D003971 5.4e-25 118.6 225 35.1
MBI02_g08731_MAGBIO Magnolia biondii HOM05D003474 ORTHO05D003971 5.4e-25 118.6 203 33.0
Rhsim08G0010000 Rhododendron simsii HOM05D003474 ORTHO05D003971 7.0e-25 118.2 197 37.6
PSO781G0304 Papaver somniferum HOM05D003474 ORTHO05D003971 9.2e-25 117.9 213 35.2
Lsat_1_v5_gn_5_43760 Lactuca sativa HOM05D003474 ORTHO05D003971 1.2e-24 117.5 211 35.5
CSS0003854 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.6e-24 117.1 210 35.2
CANSAT01G1468 Cannabis sativa HOM05D003474 ORTHO05D003971 1.6e-24 117.1 205 38.5
Ah.02g122460 Amaranthus hybridus HOM05D003474 ORTHO05D003971 2.0e-24 116.7 217 36.9
Sc16g0005640 Simmondsia chinensis HOM05D003474 ORTHO05D003971 2.0e-24 116.7 210 39.0
Atru.chr4.72 Acer truncatum HOM05D003474 ORTHO05D003971 2.7e-24 116.3 239 36.0
Atru.chr4.73 Acer truncatum HOM05D003474 ORTHO05D003971 2.7e-24 116.3 239 36.0
Nitab4.5_0016805g0010 Nicotiana tabacum HOM05D003474 ORTHO05D003971 4.6e-24 115.5 176 38.1
PGR004G1795 Punica granatum HOM05D003474 ORTHO05D003971 7.8e-24 114.8 206 35.9
CANSAT01G0924 Cannabis sativa HOM05D003474 ORTHO05D003971 1.0e-23 114.4 204 37.3
Lsat_1_v5_gn_5_43140 Lactuca sativa HOM05D003474 ORTHO05D003971 1.7e-23 113.6 193 35.2
Lsat_1_v5_gn_5_43240 Lactuca sativa HOM05D003474 ORTHO05D003971 1.7e-23 113.6 193 35.2
PSO781G0331 Papaver somniferum HOM05D003474 ORTHO05D003971 1.7e-23 113.6 197 35.5
Lsat_1_v5_gn_5_43320 Lactuca sativa HOM05D003474 ORTHO05D003971 2.3e-23 113.2 193 35.8
Actinidia28867 Actinidia chinensis HOM05D003474 ORTHO05D003971 3.0e-23 112.8 175 38.9
Lsat_1_v5_gn_5_43280 Lactuca sativa HOM05D003474 ORTHO05D003971 3.0e-23 112.8 193 35.8
PSO781G0184 Papaver somniferum HOM05D003474 ORTHO05D003971 3.0e-23 112.8 209 35.4
EL10Ac6g15097 Beta vulgaris HOM05D003474 ORTHO05D003971 5.0e-23 112.1 211 36.5
Lsat_1_v5_gn_5_43380 Lactuca sativa HOM05D003474 ORTHO05D003971 5.0e-23 112.1 198 36.9
Sabra05G0062700 Salix brachista HOM05D003474 ORTHO05D003971 6.6e-23 111.7 172 39.5
AUR62003788 Chenopodium quinoa HOM05D003474 ORTHO05D003971 1.1e-22 110.9 210 34.3
PSO541G6092 Papaver somniferum HOM05D003474 ORTHO05D003971 1.1e-22 110.9 209 36.4
AUR62002014 Chenopodium quinoa HOM05D003474 ORTHO05D003971 1.9e-22 110.2 212 33.5
A10p27350 Brassica napus HOM05D003474 ORTHO05D003971 3.3e-22 109.4 197 31.0
BcaC04g19322 Brassica carinata HOM05D003474 ORTHO05D003971 4.3e-22 109.0 197 31.0
C09p67210 Brassica napus HOM05D003474 ORTHO05D003971 4.3e-22 109.0 197 31.0
BraA06t26118Z Brassica rapa HOM05D003474 ORTHO05D003971 5.6e-22 108.6 201 35.8
ECA246G4897 Erigeron canadensis HOM05D003474 ORTHO05D003971 9.5e-22 107.8 199 33.7
BcaB08g37131 Brassica carinata HOM05D003474 ORTHO05D003971 2.1e-21 106.7 196 31.6
Carub.0006s0867 Capsella rubella HOM05D003474 ORTHO05D003971 6.2e-21 105.1 173 35.3
AL6G20700 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 8.1e-21 104.8 154 37.7
BcaC01g02734 Brassica carinata HOM05D003474 ORTHO05D003971 8.1e-21 104.8 197 34.5
C03p61160 Brassica napus HOM05D003474 ORTHO05D003971 8.1e-21 104.8 197 34.5
BolC3t18376H Brassica oleracea HOM05D003474 ORTHO05D003971 8.1e-21 104.8 197 34.5
BraA10t44786Z Brassica rapa HOM05D003474 ORTHO05D003971 1.1e-20 104.4 197 29.9
DCAR_003502 Daucus carota HOM05D003474 ORTHO05D003971 1.1e-20 104.4 198 34.8
AL8G42540 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 1.4e-20 104.0 197 35.0
Carub.0008s2587 Capsella rubella HOM05D003474 ORTHO05D003971 1.4e-20 104.0 189 35.4
CARHR203080 Cardamine hirsuta HOM05D003474 ORTHO05D003971 1.8e-20 103.6 169 33.7
DCAR_003501 Daucus carota HOM05D003474 ORTHO05D003971 2.3e-20 103.2 196 32.7
BolC9t59492H Brassica oleracea HOM05D003474 ORTHO05D003971 4.0e-20 102.4 197 29.9
Thhalv10014734m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 5.2e-20 102.1 173 34.1
Sp2g28110 Schrenkiella parvula HOM05D003474 ORTHO05D003971 5.2e-20 102.1 199 32.2
AT5G10210 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 6.8e-20 101.7 195 33.3
ClCG01G018790 Citrullus lanatus HOM05D003474 ORTHO05D003971 6.8e-20 101.7 206 35.4
Thhalv10005637m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 6.8e-20 101.7 197 31.0
SalBow5G0419 Salvia bowleyana HOM05D003474 ORTHO05D003971 6.8e-20 101.7 203 34.0
SalBow5G4466 Salvia bowleyana HOM05D003474 ORTHO05D003971 6.8e-20 101.7 203 34.0
Dinv13182 Davidia involucrata HOM05D003474 ORTHO05D003971 8.9e-20 101.3 144 38.9
QL06p049605 Quercus lobata HOM05D003474 ORTHO05D003971 8.9e-20 101.3 101 53.5
Sp6g33190 Schrenkiella parvula HOM05D003474 ORTHO05D003971 8.9e-20 101.3 200 33.0
AT5G65030 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 1.2e-19 100.9 154 36.4
SalBow5G3228 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.2e-19 100.9 212 34.0
BcaB02g09856 Brassica carinata HOM05D003474 ORTHO05D003971 2.0e-19 100.1 196 32.1
A06p31850 Brassica napus HOM05D003474 ORTHO05D003971 2.6e-19 99.8 170 36.5
Migut.H02362 Erythranthe guttata HOM05D003474 ORTHO05D003971 4.4e-19 99.0 218 34.4
CARHR293740 Cardamine hirsuta HOM05D003474 ORTHO05D003971 5.8e-19 98.6 186 31.2
Aa31LG3G16930 Aethionema arabicum HOM05D003474 ORTHO05D003971 6.4e-18 95.1 186 31.7
Migut.L00118 Erythranthe guttata HOM05D003474 ORTHO05D003971 4.1e-17 92.4 197 32.5
Sabra07G0076400 Salix brachista HOM05D003474 ORTHO05D003971 7.1e-17 91.7 198 30.8
SalBow5G1505 Salvia bowleyana HOM05D003474 ORTHO05D003971 9.2e-17 91.3 115 40.9
DCAR_003503 Daucus carota HOM05D003474 ORTHO05D003971 1.6e-16 90.5 179 34.1
SalBow3G2422 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.0e-15 87.8 199 33.2
Peaxi162Scf00212g00111 Petunia axillaris HOM05D003474 ORTHO05D003971 6.2e-13 78.6 80 46.2
BcaB08g37129 Brassica carinata HOM05D003474 ORTHO05D003971 8.1e-13 78.2 99 37.4
Sopen04g025000 Solanum pennellii HOM05D003474 ORTHO05D003971 5.2e-12 75.5 125 37.6
Nitab4.5_0006517g0020 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.2e-11 74.3 139 34.5
BcaC04g19323 Brassica carinata HOM05D003474 ORTHO05D003971 7.6e-11 71.6 88 37.5
MELO3C007759.2 Cucumis melo HOM05D003474 ORTHO05D003971 1.3e-10 70.9 127 33.9
PGSC0003DMG400001890 Solanum tuberosum HOM05D003474 ORTHO05D003971 1.3e-10 70.9 132 35.6
Solyc04g055130.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 1.7e-10 70.5 126 36.5
DCAR_003504 Daucus carota HOM05D003474 ORTHO05D003971 6.4e-10 68.6 172 29.7
PGSC0003DMG400001892 Solanum tuberosum HOM05D003474 ORTHO05D003971 8.4e-10 68.2 130 36.2
SEGI_20067 Sequoiadendron giganteum HOM05D003474 ORTHO05D003971 1.2e-08 64.3 121 33.1
Solyc04g055140.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 2.7e-08 63.2 131 32.8
Peaxi162Scf00212g00105 Petunia axillaris HOM05D003474 ORTHO05D003971 3.5e-08 62.8 129 31.0
Lalb_Chr23g0277361 Lupinus albus HOM05D003474 ORTHO05D003971 6.0e-08 62.0 55 67.3
Lalb_Chr23g0277391 Lupinus albus HOM05D003474 ORTHO05D003971 5.1e-07 58.9 49 61.2
Solyc04g055150.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 1.5e-06 57.4 131 30.5
Sopen04g025010 Solanum pennellii HOM05D003474 ORTHO05D003971 5.6e-06 55.5 131 30.5
Lalb_Chr23g0277401 Lupinus albus HOM05D003474 ORTHO05D003971 9.6e-06 54.7 54 55.6


User provided reference genes

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