Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16532_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.5e-112 409.5 196 100.0
Ca_16530_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.2e-109 399.8 196 98.0
Ca_16531_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 1.7e-108 396.0 196 96.9
Ca_16533_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 4.2e-107 391.3 194 96.4
Medtr3g087280 Medicago truncatula HOM05D003474 ORTHO05D003971 9.1e-94 347.1 200 83.5
TPR.G17847 Trifolium pratense HOM05D003474 ORTHO05D003971 2.1e-90 335.9 200 81.0
TPR.G17848 Trifolium pratense HOM05D003474 ORTHO05D003971 1.0e-89 333.6 196 80.6
TPR.G17845 Trifolium pratense HOM05D003474 ORTHO05D003971 5.2e-89 331.3 200 80.0
Medtr3g087275 Medicago truncatula HOM05D003474 ORTHO05D003971 6.8e-89 330.9 200 82.0
TPR.G17834 Trifolium pratense HOM05D003474 ORTHO05D003971 1.7e-87 326.2 200 78.5
Psat5g089920 Pisum sativum HOM05D003474 ORTHO05D003971 2.4e-86 322.4 200 77.5
Psat5g089840 Pisum sativum HOM05D003474 ORTHO05D003971 7.0e-86 320.9 193 80.3
Medtr3g087278 Medicago truncatula HOM05D003474 ORTHO05D003971 3.5e-85 318.5 194 77.3
Medtr3g087270 Medicago truncatula HOM05D003474 ORTHO05D003971 1.9e-83 312.8 194 75.8
Medtr3g087325 Medicago truncatula HOM05D003474 ORTHO05D003971 1.9e-83 312.8 200 76.5
Psat5g089720 Pisum sativum HOM05D003474 ORTHO05D003971 7.3e-83 310.8 200 76.0
TPR.G17829 Trifolium pratense HOM05D003474 ORTHO05D003971 7.3e-83 310.8 200 75.5
Psat5g089880 Pisum sativum HOM05D003474 ORTHO05D003971 1.2e-82 310.1 193 78.2
Medtr3g087330 Medicago truncatula HOM05D003474 ORTHO05D003971 6.1e-82 307.8 200 74.0
TPR.G17835 Trifolium pratense HOM05D003474 ORTHO05D003971 6.4e-79 297.7 200 74.0
Psat5g089800 Pisum sativum HOM05D003474 ORTHO05D003971 1.2e-77 293.5 193 73.1
Glyma.18G017500 Glycine max HOM05D003474 ORTHO05D003971 6.6e-68 261.2 201 66.2
Glyma.11G239900 Glycine max HOM05D003474 ORTHO05D003971 1.9e-67 259.6 201 64.2
VMungo1383G0909 Vigna mungo HOM05D003474 ORTHO05D003971 8.3e-63 244.2 202 61.4
TPR.G17838 Trifolium pratense HOM05D003474 ORTHO05D003971 6.0e-61 238.0 200 61.5
Lalb_Chr23g0277351 Lupinus albus HOM05D003474 ORTHO05D003971 6.6e-60 234.6 203 62.6
Lj6g0005521 Lotus japonicus HOM05D003474 ORTHO05D003971 1.9e-59 233.0 199 61.3
Lalb_Chr08g0231081 Lupinus albus HOM05D003474 ORTHO05D003971 1.6e-58 229.9 202 64.4
Medtr3g087300 Medicago truncatula HOM05D003474 ORTHO05D003971 8.1e-58 227.6 197 62.4
Lj6g0012852 Lotus japonicus HOM05D003474 ORTHO05D003971 4.0e-57 225.3 200 60.0
Lj6g0019645 Lotus japonicus HOM05D003474 ORTHO05D003971 4.4e-56 221.9 199 59.8
Lalb_Chr08g0231071 Lupinus albus HOM05D003474 ORTHO05D003971 5.8e-56 221.5 203 59.6
Phvul.001G251900 Phaseolus vulgaris HOM05D003474 ORTHO05D003971 2.8e-50 202.6 165 63.0
CiPaw.04G099000 Carya illinoinensis HOM05D003474 ORTHO05D003971 2.0e-40 169.9 191 47.6
FAN23G2065 Fragaria x ananassa HOM05D003474 ORTHO05D003971 1.7e-39 166.8 196 46.9
FvH4_1g20980 Fragaria vesca HOM05D003474 ORTHO05D003971 2.2e-39 166.4 196 46.9
FAN19G2364 Fragaria x ananassa HOM05D003474 ORTHO05D003971 8.4e-39 164.5 196 46.4
Sabra07G0076200 Salix brachista HOM05D003474 ORTHO05D003971 8.4e-39 164.5 197 44.7
Sabra07G0076300 Salix brachista HOM05D003474 ORTHO05D003971 8.4e-39 164.5 197 44.7
FAN28G0803 Fragaria x ananassa HOM05D003474 ORTHO05D003971 1.9e-38 163.3 196 45.4
Sabra07G0075900 Salix brachista HOM05D003474 ORTHO05D003971 1.9e-38 163.3 197 44.7
Sabra07G0076000 Salix brachista HOM05D003474 ORTHO05D003971 1.9e-38 163.3 197 44.7
Potri.007G092300 Populus trichocarpa HOM05D003474 ORTHO05D003971 5.4e-38 161.8 197 44.2
QL06p049633 Quercus lobata HOM05D003474 ORTHO05D003971 5.4e-38 161.8 195 46.7
QL06p049587 Quercus lobata HOM05D003474 ORTHO05D003971 7.1e-38 161.4 195 45.6
Sabra07G0076100 Salix brachista HOM05D003474 ORTHO05D003971 1.2e-37 160.6 197 44.2
RcHm_v2.0_Chr2g0114461 Rosa chinensis HOM05D003474 ORTHO05D003971 1.6e-37 160.2 195 44.1
QL06p049618 Quercus lobata HOM05D003474 ORTHO05D003971 2.1e-37 159.8 195 46.2
FAN26G3130 Fragaria x ananassa HOM05D003474 ORTHO05D003971 3.5e-37 159.1 196 46.4
Prupe.6G186100 Prunus persica HOM05D003474 ORTHO05D003971 3.0e-36 156.0 198 46.5
Thecc.01G102400 Theobroma cacao HOM05D003474 ORTHO05D003971 3.0e-36 156.0 201 44.3
Cfa002670 Carpinus fangiana HOM05D003474 ORTHO05D003971 3.9e-36 155.6 200 43.5
RcHm_v2.0_Chr2g0114471 Rosa chinensis HOM05D003474 ORTHO05D003971 3.9e-36 155.6 197 43.7
Gohir.A11G201900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 4.3e-35 152.1 201 44.3
Nn1g05334 Nelumbo nucifera HOM05D003474 ORTHO05D003971 1.3e-34 150.6 200 42.5
QL06p049593 Quercus lobata HOM05D003474 ORTHO05D003971 1.3e-34 150.6 195 44.1
Ciclev10027277m.g Citrus clementina HOM05D003474 ORTHO05D003971 3.7e-34 149.1 199 42.7
Gorai.007G239100 Gossypium raimondii HOM05D003474 ORTHO05D003971 3.7e-34 149.1 198 45.5
COL.COLO4_09957 Corchorus olitorius HOM05D003474 ORTHO05D003971 8.1e-34 147.9 204 43.1
Duzib187G1721 Durio zibethinus HOM05D003474 ORTHO05D003971 8.1e-34 147.9 200 46.5
Gohir.D11G221900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 1.8e-33 146.7 201 44.3
Hma1.2p1_0047F.1_g027910 Hydrangea macrophylla HOM05D003474 ORTHO05D003971 2.4e-33 146.4 197 42.6
Potri.005G076100 Populus trichocarpa HOM05D003474 ORTHO05D003971 2.4e-33 146.4 195 43.6
TAR381G0511 Trochodendron aralioides HOM05D003474 ORTHO05D003971 5.3e-33 145.2 197 42.6
CSS0038157 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 6.9e-33 144.8 205 41.5
Lj4P889T19 Lonicera japonica HOM05D003474 ORTHO05D003971 6.9e-33 144.8 194 41.8
PGSC0003DMG400001891 Solanum tuberosum HOM05D003474 ORTHO05D003971 4.5e-32 142.1 212 40.6
Sed0016843 Sechium edule HOM05D003474 ORTHO05D003971 9.9e-32 141.0 193 42.5
CiPaw.03G141500 Carya illinoinensis HOM05D003474 ORTHO05D003971 1.3e-31 140.6 208 40.9
Duzib147G1557 Durio zibethinus HOM05D003474 ORTHO05D003971 1.3e-31 140.6 197 44.7
Nn5g30135 Nelumbo nucifera HOM05D003474 ORTHO05D003971 2.9e-31 139.4 208 39.9
CsaV3_6G045460 Cucumis sativus L. HOM05D003474 ORTHO05D003971 4.9e-31 138.7 192 41.7
Manes.12G135500 Manihot esculenta HOM05D003474 ORTHO05D003971 3.2e-30 136.0 207 40.6
Haze_24940 Corylus avellana HOM05D003474 ORTHO05D003971 4.2e-30 135.6 172 42.4
CAN.G441.1 Capsicum annuum HOM05D003474 ORTHO05D003971 7.1e-30 134.8 199 41.7
CSS0039995 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.2e-29 134.0 208 38.9
CSS0044421 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.6e-29 133.7 211 38.9
Cc07_g15300 Coffea canephora HOM05D003474 ORTHO05D003971 1.6e-29 133.7 196 41.3
Oeu056606.1 Olea europaea HOM05D003474 ORTHO05D003971 1.6e-29 133.7 202 42.1
Aqoxy6G00810 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 2.1e-29 133.3 195 40.0
TWI74G0170 Tripterygium wilfordii HOM05D003474 ORTHO05D003971 2.1e-29 133.3 203 40.9
CSS0002095 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 6.0e-29 131.7 211 38.4
Atru.chr4.70 Acer truncatum HOM05D003474 ORTHO05D003971 7.9e-29 131.3 235 38.7
ClCG01G018800 Citrullus lanatus HOM05D003474 ORTHO05D003971 7.9e-29 131.3 199 35.7
Oeu002403.1 Olea europaea HOM05D003474 ORTHO05D003971 1.0e-28 131.0 196 40.8
Peaxi162Scf00611g00012 Petunia axillaris HOM05D003474 ORTHO05D003971 1.3e-28 130.6 207 38.6
CSS0009549 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 8.7e-28 127.9 211 37.9
TAR625G0209 Trochodendron aralioides HOM05D003474 ORTHO05D003971 8.7e-28 127.9 198 41.4
Eucgr.I00429 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.9e-27 126.7 206 37.9
Eucgr.I00430 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.9e-27 126.7 206 37.9
Nitab4.5_0000104g0070 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.5e-27 126.3 176 38.6
PSO781G0183 Papaver somniferum HOM05D003474 ORTHO05D003971 3.3e-27 125.9 197 38.1
Nitab4.5_0000104g0120 Nicotiana tabacum HOM05D003474 ORTHO05D003971 9.6e-27 124.4 173 39.9
THA.LOC104804926 Tarenaya hassleriana HOM05D003474 ORTHO05D003971 2.1e-26 123.2 181 35.9
Cfa002671 Carpinus fangiana HOM05D003474 ORTHO05D003971 3.7e-26 122.5 198 38.4
TAR625G1533 Trochodendron aralioides HOM05D003474 ORTHO05D003971 3.7e-26 122.5 196 42.3
Sopen03g021520 Solanum pennellii HOM05D003474 ORTHO05D003971 4.8e-26 122.1 207 35.7
Lsat_1_v5_gn_5_43760 Lactuca sativa HOM05D003474 ORTHO05D003971 6.2e-26 121.7 211 36.5
PSO781G0304 Papaver somniferum HOM05D003474 ORTHO05D003971 8.2e-26 121.3 211 34.6
Rhsim08G0010000 Rhododendron simsii HOM05D003474 ORTHO05D003971 8.2e-26 121.3 197 38.1
Aqoxy6G00809 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 1.8e-25 120.2 185 35.1
Cpa.g.sc213.15 Carica papaya HOM05D003474 ORTHO05D003971 2.4e-25 119.8 199 38.7
PSO781G0331 Papaver somniferum HOM05D003474 ORTHO05D003971 3.1e-25 119.4 197 36.5
Lsat_1_v5_gn_5_43280 Lactuca sativa HOM05D003474 ORTHO05D003971 5.3e-25 118.6 193 36.8
MBI02_g08731_MAGBIO Magnolia biondii HOM05D003474 ORTHO05D003971 5.3e-25 118.6 190 34.2
Ah.02g122460 Amaranthus hybridus HOM05D003474 ORTHO05D003971 6.9e-25 118.2 214 37.9
CSS0003854 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 6.9e-25 118.2 210 34.8
Solyc03g078620.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 9.0e-25 117.9 212 35.8
Atru.chr4.72 Acer truncatum HOM05D003474 ORTHO05D003971 1.2e-24 117.5 239 36.0
Atru.chr4.73 Acer truncatum HOM05D003474 ORTHO05D003971 1.2e-24 117.5 239 36.0
PSO781G0184 Papaver somniferum HOM05D003474 ORTHO05D003971 1.5e-24 117.1 197 36.0
PGSC0003DMG400021798 Solanum tuberosum HOM05D003474 ORTHO05D003971 1.5e-24 117.1 205 35.1
Lsat_1_v5_gn_5_43140 Lactuca sativa HOM05D003474 ORTHO05D003971 2.0e-24 116.7 193 35.8
Lsat_1_v5_gn_5_43240 Lactuca sativa HOM05D003474 ORTHO05D003971 2.0e-24 116.7 193 35.8
Lsat_1_v5_gn_5_43380 Lactuca sativa HOM05D003474 ORTHO05D003971 2.0e-24 116.7 198 37.9
Lsat_1_v5_gn_5_43320 Lactuca sativa HOM05D003474 ORTHO05D003971 2.6e-24 116.3 193 36.3
PSO541G6092 Papaver somniferum HOM05D003474 ORTHO05D003971 5.8e-24 115.2 197 37.1
Nitab4.5_0016805g0010 Nicotiana tabacum HOM05D003474 ORTHO05D003971 7.6e-24 114.8 176 38.1
CANSAT73G0001 Cannabis sativa HOM05D003474 ORTHO05D003971 1.0e-23 114.4 222 36.0
ECA246G4897 Erigeron canadensis HOM05D003474 ORTHO05D003971 1.3e-23 114.0 196 34.7
CANSAT01G1468 Cannabis sativa HOM05D003474 ORTHO05D003971 1.7e-23 113.6 205 38.0
Sc16g0005640 Simmondsia chinensis HOM05D003474 ORTHO05D003971 1.7e-23 113.6 199 39.2
Actinidia28867 Actinidia chinensis HOM05D003474 ORTHO05D003971 2.2e-23 113.2 175 38.9
AUR62003788 Chenopodium quinoa HOM05D003474 ORTHO05D003971 2.2e-23 113.2 220 34.5
Sabra05G0062700 Salix brachista HOM05D003474 ORTHO05D003971 2.2e-23 113.2 172 39.5
EL10Ac6g15097 Beta vulgaris HOM05D003474 ORTHO05D003971 2.9e-23 112.8 211 36.5
CANSAT01G0924 Cannabis sativa HOM05D003474 ORTHO05D003971 2.9e-23 112.8 204 37.7
PGR004G1795 Punica granatum HOM05D003474 ORTHO05D003971 2.9e-23 112.8 206 35.0
AUR62002014 Chenopodium quinoa HOM05D003474 ORTHO05D003971 1.1e-22 110.9 212 33.5
A10p27350 Brassica napus HOM05D003474 ORTHO05D003971 2.5e-22 109.8 197 31.5
BcaC04g19322 Brassica carinata HOM05D003474 ORTHO05D003971 3.2e-22 109.4 197 31.5
C09p67210 Brassica napus HOM05D003474 ORTHO05D003971 3.2e-22 109.4 197 31.5
BraA06t26118Z Brassica rapa HOM05D003474 ORTHO05D003971 3.2e-22 109.4 201 36.3
BcaB08g37131 Brassica carinata HOM05D003474 ORTHO05D003971 7.1e-22 108.2 196 33.2
Carub.0006s0867 Capsella rubella HOM05D003474 ORTHO05D003971 1.2e-21 107.5 198 33.8
DCAR_003502 Daucus carota HOM05D003474 ORTHO05D003971 2.7e-21 106.3 198 34.8
AL6G20700 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 6.0e-21 105.1 154 38.3
BcaC01g02734 Brassica carinata HOM05D003474 ORTHO05D003971 6.0e-21 105.1 197 35.0
C03p61160 Brassica napus HOM05D003474 ORTHO05D003971 6.0e-21 105.1 197 35.0
BolC3t18376H Brassica oleracea HOM05D003474 ORTHO05D003971 6.0e-21 105.1 197 35.0
BraA10t44786Z Brassica rapa HOM05D003474 ORTHO05D003971 7.9e-21 104.8 197 30.5
Sp2g28110 Schrenkiella parvula HOM05D003474 ORTHO05D003971 7.9e-21 104.8 204 33.8
AL8G42540 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 1.0e-20 104.4 199 35.2
Carub.0008s2587 Capsella rubella HOM05D003474 ORTHO05D003971 1.0e-20 104.4 190 35.3
DCAR_003501 Daucus carota HOM05D003474 ORTHO05D003971 1.0e-20 104.4 196 32.1
CARHR203080 Cardamine hirsuta HOM05D003474 ORTHO05D003971 1.3e-20 104.0 169 34.3
Sp6g33190 Schrenkiella parvula HOM05D003474 ORTHO05D003971 1.3e-20 104.0 200 34.0
AT5G10210 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 1.8e-20 103.6 167 36.5
Thhalv10005637m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 2.3e-20 103.2 197 31.5
BolC9t59492H Brassica oleracea HOM05D003474 ORTHO05D003971 3.0e-20 102.8 197 30.5
Migut.H02362 Erythranthe guttata HOM05D003474 ORTHO05D003971 3.9e-20 102.4 220 35.0
AT5G65030 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 6.7e-20 101.7 196 33.2
SalBow5G0419 Salvia bowleyana HOM05D003474 ORTHO05D003971 6.7e-20 101.7 192 33.9
SalBow5G4466 Salvia bowleyana HOM05D003474 ORTHO05D003971 6.7e-20 101.7 192 33.9
QL06p049605 Quercus lobata HOM05D003474 ORTHO05D003971 8.7e-20 101.3 101 53.5
SalBow5G3228 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.1e-19 100.9 201 33.8
BcaB02g09856 Brassica carinata HOM05D003474 ORTHO05D003971 1.5e-19 100.5 196 32.1
CARHR293740 Cardamine hirsuta HOM05D003474 ORTHO05D003971 1.9e-19 100.1 194 30.4
Dinv13182 Davidia involucrata HOM05D003474 ORTHO05D003971 1.9e-19 100.1 139 39.6
Thhalv10014734m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 1.9e-19 100.1 172 33.7
A06p31850 Brassica napus HOM05D003474 ORTHO05D003971 2.5e-19 99.8 170 35.3
ClCG01G018790 Citrullus lanatus HOM05D003474 ORTHO05D003971 3.3e-19 99.4 204 35.8
Aa31LG3G16930 Aethionema arabicum HOM05D003474 ORTHO05D003971 4.8e-18 95.5 186 32.3
Migut.L00118 Erythranthe guttata HOM05D003474 ORTHO05D003971 1.8e-17 93.6 197 32.5
Sabra07G0076400 Salix brachista HOM05D003474 ORTHO05D003971 1.8e-17 93.6 187 32.6
DCAR_003503 Daucus carota HOM05D003474 ORTHO05D003971 1.2e-16 90.9 179 33.5
SalBow3G2422 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.0e-16 90.1 199 33.7
SalBow5G1505 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.6e-16 89.7 104 42.3
BcaB08g37129 Brassica carinata HOM05D003474 ORTHO05D003971 6.1e-13 78.6 99 38.4
Peaxi162Scf00212g00111 Petunia axillaris HOM05D003474 ORTHO05D003971 7.9e-13 78.2 80 46.2
Sopen04g025000 Solanum pennellii HOM05D003474 ORTHO05D003971 1.4e-12 77.4 125 38.4
Nitab4.5_0006517g0020 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.5e-11 73.9 139 34.5
MELO3C007759.2 Cucumis melo HOM05D003474 ORTHO05D003971 2.5e-11 73.2 176 29.5
BcaC04g19323 Brassica carinata HOM05D003474 ORTHO05D003971 5.7e-11 72.0 88 38.6
Solyc04g055130.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 7.4e-11 71.6 125 36.0
PGSC0003DMG400001890 Solanum tuberosum HOM05D003474 ORTHO05D003971 2.2e-10 70.1 132 34.8
DCAR_003504 Daucus carota HOM05D003474 ORTHO05D003971 6.3e-10 68.6 172 29.7
PGSC0003DMG400001892 Solanum tuberosum HOM05D003474 ORTHO05D003971 1.1e-09 67.8 130 36.2
Lalb_Chr23g0277361 Lupinus albus HOM05D003474 ORTHO05D003971 1.5e-08 63.9 55 67.3
Solyc04g055140.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 1.5e-08 63.9 131 32.8
SEGI_20067 Sequoiadendron giganteum HOM05D003474 ORTHO05D003971 2.0e-08 63.5 182 29.1
Peaxi162Scf00212g00105 Petunia axillaris HOM05D003474 ORTHO05D003971 2.6e-08 63.2 129 31.0
Solyc04g055150.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 6.5e-07 58.5 131 31.3
Sopen04g025010 Solanum pennellii HOM05D003474 ORTHO05D003971 6.5e-07 58.5 131 31.3
Lalb_Chr23g0277391 Lupinus albus HOM05D003474 ORTHO05D003971 1.4e-06 57.4 49 59.2


User provided reference genes

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