Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16531_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 7.4e-112 407.1 196 100.0
Ca_16530_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 9.1e-110 400.2 196 98.5
Ca_16532_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 5.0e-108 394.4 196 96.9
Ca_16533_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 9.4e-107 390.2 194 96.9
Medtr3g087280 Medicago truncatula HOM05D003474 ORTHO05D003971 5.4e-94 347.8 200 84.0
TPR.G17847 Trifolium pratense HOM05D003474 ORTHO05D003971 7.2e-91 337.4 200 82.0
Medtr3g087275 Medicago truncatula HOM05D003474 ORTHO05D003971 9.5e-91 337.0 200 83.5
TPR.G17845 Trifolium pratense HOM05D003474 ORTHO05D003971 6.1e-90 334.3 200 81.0
TPR.G17848 Trifolium pratense HOM05D003474 ORTHO05D003971 6.1e-90 334.3 196 81.1
TPR.G17834 Trifolium pratense HOM05D003474 ORTHO05D003971 9.8e-88 327.0 200 79.0
Medtr3g087278 Medicago truncatula HOM05D003474 ORTHO05D003971 2.8e-87 325.5 194 79.4
Psat5g089920 Pisum sativum HOM05D003474 ORTHO05D003971 1.4e-86 323.2 200 78.0
Psat5g089840 Pisum sativum HOM05D003474 ORTHO05D003971 9.2e-86 320.5 193 80.3
Medtr3g087325 Medicago truncatula HOM05D003474 ORTHO05D003971 2.7e-85 318.9 200 78.0
Medtr3g087270 Medicago truncatula HOM05D003474 ORTHO05D003971 1.1e-83 313.5 194 76.3
Medtr3g087330 Medicago truncatula HOM05D003474 ORTHO05D003971 1.9e-83 312.8 200 75.5
Psat5g089720 Pisum sativum HOM05D003474 ORTHO05D003971 2.5e-83 312.4 200 77.0
TPR.G17829 Trifolium pratense HOM05D003474 ORTHO05D003971 4.3e-83 311.6 200 76.0
Psat5g089880 Pisum sativum HOM05D003474 ORTHO05D003971 7.3e-83 310.8 193 78.8
TPR.G17835 Trifolium pratense HOM05D003474 ORTHO05D003971 2.2e-79 299.3 200 75.0
Psat5g089800 Pisum sativum HOM05D003474 ORTHO05D003971 4.1e-78 295.0 193 74.1
Glyma.18G017500 Glycine max HOM05D003474 ORTHO05D003971 2.3e-68 262.7 201 67.2
Glyma.11G239900 Glycine max HOM05D003474 ORTHO05D003971 4.3e-67 258.5 201 64.7
VMungo1383G0909 Vigna mungo HOM05D003474 ORTHO05D003971 3.2e-62 242.3 202 61.9
TPR.G17838 Trifolium pratense HOM05D003474 ORTHO05D003971 4.6e-61 238.4 200 62.0
Lalb_Chr23g0277351 Lupinus albus HOM05D003474 ORTHO05D003971 1.0e-60 237.3 203 63.5
Lj6g0005521 Lotus japonicus HOM05D003474 ORTHO05D003971 9.5e-59 230.7 199 61.3
Lalb_Chr08g0231081 Lupinus albus HOM05D003474 ORTHO05D003971 4.7e-58 228.4 202 64.4
Medtr3g087300 Medicago truncatula HOM05D003474 ORTHO05D003971 4.7e-58 228.4 197 62.9
Lj6g0012852 Lotus japonicus HOM05D003474 ORTHO05D003971 2.0e-56 223.0 200 60.0
Lj6g0019645 Lotus japonicus HOM05D003474 ORTHO05D003971 4.4e-56 221.9 199 60.3
Lalb_Chr08g0231071 Lupinus albus HOM05D003474 ORTHO05D003971 3.8e-55 218.8 203 59.6
Phvul.001G251900 Phaseolus vulgaris HOM05D003474 ORTHO05D003971 1.1e-49 200.7 165 63.0
CiPaw.04G099000 Carya illinoinensis HOM05D003474 ORTHO05D003971 1.3e-39 167.2 191 47.1
FAN23G2065 Fragaria x ananassa HOM05D003474 ORTHO05D003971 5.4e-38 161.8 196 45.9
Sabra07G0076200 Salix brachista HOM05D003474 ORTHO05D003971 5.4e-38 161.8 197 44.7
Sabra07G0076300 Salix brachista HOM05D003474 ORTHO05D003971 5.4e-38 161.8 197 44.7
FvH4_1g20980 Fragaria vesca HOM05D003474 ORTHO05D003971 7.1e-38 161.4 196 45.9
Sabra07G0075900 Salix brachista HOM05D003474 ORTHO05D003971 1.2e-37 160.6 197 44.7
Sabra07G0076000 Salix brachista HOM05D003474 ORTHO05D003971 1.2e-37 160.6 197 44.7
FAN19G2364 Fragaria x ananassa HOM05D003474 ORTHO05D003971 2.7e-37 159.5 196 45.4
QL06p049633 Quercus lobata HOM05D003474 ORTHO05D003971 2.7e-37 159.5 195 46.2
Potri.007G092300 Populus trichocarpa HOM05D003474 ORTHO05D003971 3.5e-37 159.1 197 44.2
QL06p049587 Quercus lobata HOM05D003474 ORTHO05D003971 3.5e-37 159.1 195 45.1
FAN28G0803 Fragaria x ananassa HOM05D003474 ORTHO05D003971 6.0e-37 158.3 196 44.4
Sabra07G0076100 Salix brachista HOM05D003474 ORTHO05D003971 7.9e-37 157.9 197 44.2
QL06p049618 Quercus lobata HOM05D003474 ORTHO05D003971 1.0e-36 157.5 195 45.6
RcHm_v2.0_Chr2g0114461 Rosa chinensis HOM05D003474 ORTHO05D003971 1.8e-36 156.8 195 43.1
Prupe.6G186100 Prunus persica HOM05D003474 ORTHO05D003971 5.1e-36 155.2 198 46.0
Thecc.01G102400 Theobroma cacao HOM05D003474 ORTHO05D003971 8.7e-36 154.5 201 44.3
FAN26G3130 Fragaria x ananassa HOM05D003474 ORTHO05D003971 1.1e-35 154.1 196 45.4
Cfa002670 Carpinus fangiana HOM05D003474 ORTHO05D003971 1.9e-35 153.3 200 43.5
QL06p049593 Quercus lobata HOM05D003474 ORTHO05D003971 2.5e-35 152.9 195 44.6
Ciclev10027277m.g Citrus clementina HOM05D003474 ORTHO05D003971 1.3e-34 150.6 199 43.7
RcHm_v2.0_Chr2g0114471 Rosa chinensis HOM05D003474 ORTHO05D003971 1.6e-34 150.2 197 42.6
Gohir.A11G201900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 4.8e-34 148.7 201 43.8
COL.COLO4_09957 Corchorus olitorius HOM05D003474 ORTHO05D003971 3.1e-33 146.0 204 42.6
Duzib187G1721 Durio zibethinus HOM05D003474 ORTHO05D003971 3.1e-33 146.0 200 46.0
Gorai.007G239100 Gossypium raimondii HOM05D003474 ORTHO05D003971 3.1e-33 146.0 198 44.9
CSS0038157 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 5.3e-33 145.2 205 41.5
Hma1.2p1_0047F.1_g027910 Hydrangea macrophylla HOM05D003474 ORTHO05D003971 6.9e-33 144.8 197 42.6
Nn1g05334 Nelumbo nucifera HOM05D003474 ORTHO05D003971 9.0e-33 144.4 200 42.0
Gohir.D11G221900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 1.2e-32 144.1 201 43.8
Potri.005G076100 Populus trichocarpa HOM05D003474 ORTHO05D003971 1.2e-32 144.1 195 43.1
Lj4P889T19 Lonicera japonica HOM05D003474 ORTHO05D003971 5.8e-32 141.7 194 40.7
PGSC0003DMG400001891 Solanum tuberosum HOM05D003474 ORTHO05D003971 7.6e-32 141.4 212 40.1
Sed0016843 Sechium edule HOM05D003474 ORTHO05D003971 1.7e-31 140.2 193 42.0
TAR381G0511 Trochodendron aralioides HOM05D003474 ORTHO05D003971 3.8e-31 139.0 197 42.1
Duzib147G1557 Durio zibethinus HOM05D003474 ORTHO05D003971 8.4e-31 137.9 197 44.2
CiPaw.03G141500 Carya illinoinensis HOM05D003474 ORTHO05D003971 1.1e-30 137.5 208 40.9
Aqoxy6G00810 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 4.2e-30 135.6 195 41.0
CsaV3_6G045460 Cucumis sativus L. HOM05D003474 ORTHO05D003971 1.2e-29 134.0 192 40.6
Manes.12G135500 Manihot esculenta HOM05D003474 ORTHO05D003971 1.6e-29 133.7 207 40.6
CAN.G441.1 Capsicum annuum HOM05D003474 ORTHO05D003971 2.1e-29 133.3 199 41.2
Nn5g30135 Nelumbo nucifera HOM05D003474 ORTHO05D003971 2.1e-29 133.3 208 39.4
CSS0039995 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 3.5e-29 132.5 208 38.5
CSS0044421 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 3.5e-29 132.5 211 38.4
Oeu056606.1 Olea europaea HOM05D003474 ORTHO05D003971 4.6e-29 132.1 202 42.1
Cc07_g15300 Coffea canephora HOM05D003474 ORTHO05D003971 7.9e-29 131.3 196 40.8
Haze_24940 Corylus avellana HOM05D003474 ORTHO05D003971 7.9e-29 131.3 169 41.4
TWI74G0170 Tripterygium wilfordii HOM05D003474 ORTHO05D003971 7.9e-29 131.3 203 40.9
CSS0002095 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.3e-28 130.6 211 37.9
Peaxi162Scf00611g00012 Petunia axillaris HOM05D003474 ORTHO05D003971 2.3e-28 129.8 207 38.2
Oeu002403.1 Olea europaea HOM05D003474 ORTHO05D003971 3.0e-28 129.4 196 40.8
Atru.chr4.70 Acer truncatum HOM05D003474 ORTHO05D003971 1.1e-27 127.5 235 38.3
ClCG01G018800 Citrullus lanatus HOM05D003474 ORTHO05D003971 1.1e-27 127.5 199 35.2
CSS0009549 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.9e-27 126.7 211 37.4
Eucgr.I00429 Eucalyptus grandis HOM05D003474 ORTHO05D003971 3.3e-27 125.9 206 38.3
Eucgr.I00430 Eucalyptus grandis HOM05D003474 ORTHO05D003971 3.3e-27 125.9 206 38.3
Nitab4.5_0000104g0070 Nicotiana tabacum HOM05D003474 ORTHO05D003971 4.3e-27 125.6 176 38.6
TAR625G0209 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.3e-26 124.0 198 41.4
Nitab4.5_0000104g0120 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.6e-26 123.6 173 39.9
Cfa002671 Carpinus fangiana HOM05D003474 ORTHO05D003971 6.2e-26 121.7 198 38.4
Sopen03g021520 Solanum pennellii HOM05D003474 ORTHO05D003971 6.2e-26 121.7 207 34.8
TAR625G1533 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.1e-25 120.9 196 42.9
PSO781G0183 Papaver somniferum HOM05D003474 ORTHO05D003971 1.8e-25 120.2 197 37.6
THA.LOC104804926 Tarenaya hassleriana HOM05D003474 ORTHO05D003971 1.8e-25 120.2 181 35.9
CANSAT01G1468 Cannabis sativa HOM05D003474 ORTHO05D003971 2.4e-25 119.8 205 39.5
CANSAT01G0924 Cannabis sativa HOM05D003474 ORTHO05D003971 5.3e-25 118.6 204 39.2
Cpa.g.sc213.15 Carica papaya HOM05D003474 ORTHO05D003971 6.9e-25 118.2 199 38.2
CSS0003854 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 9.0e-25 117.9 210 35.2
Solyc03g078620.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 9.0e-25 117.9 212 34.9
Aqoxy6G00809 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 1.2e-24 117.5 185 35.1
Atru.chr4.72 Acer truncatum HOM05D003474 ORTHO05D003971 2.0e-24 116.7 239 36.0
Atru.chr4.73 Acer truncatum HOM05D003474 ORTHO05D003971 2.0e-24 116.7 239 36.0
PGSC0003DMG400021798 Solanum tuberosum HOM05D003474 ORTHO05D003971 2.0e-24 116.7 205 35.1
Ah.02g122460 Amaranthus hybridus HOM05D003474 ORTHO05D003971 2.6e-24 116.3 217 36.4
Lsat_1_v5_gn_5_43760 Lactuca sativa HOM05D003474 ORTHO05D003971 2.6e-24 116.3 211 35.5
Rhsim08G0010000 Rhododendron simsii HOM05D003474 ORTHO05D003971 3.4e-24 115.9 197 37.1
PSO781G0304 Papaver somniferum HOM05D003474 ORTHO05D003971 4.5e-24 115.5 211 34.1
PSO781G0184 Papaver somniferum HOM05D003474 ORTHO05D003971 5.8e-24 115.2 197 36.0
MBI02_g08731_MAGBIO Magnolia biondii HOM05D003474 ORTHO05D003971 7.6e-24 114.8 190 34.2
Sabra05G0062700 Salix brachista HOM05D003474 ORTHO05D003971 7.6e-24 114.8 172 40.1
CANSAT73G0001 Cannabis sativa HOM05D003474 ORTHO05D003971 1.0e-23 114.4 222 36.0
Lsat_1_v5_gn_5_43320 Lactuca sativa HOM05D003474 ORTHO05D003971 1.0e-23 114.4 193 35.8
Lsat_1_v5_gn_5_43140 Lactuca sativa HOM05D003474 ORTHO05D003971 1.3e-23 114.0 193 35.8
Lsat_1_v5_gn_5_43240 Lactuca sativa HOM05D003474 ORTHO05D003971 1.3e-23 114.0 193 35.8
Lsat_1_v5_gn_5_43280 Lactuca sativa HOM05D003474 ORTHO05D003971 1.3e-23 114.0 193 35.8
PSO781G0331 Papaver somniferum HOM05D003474 ORTHO05D003971 1.3e-23 114.0 197 36.0
Actinidia28867 Actinidia chinensis HOM05D003474 ORTHO05D003971 2.2e-23 113.2 175 38.9
Nitab4.5_0016805g0010 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.2e-23 113.2 176 37.5
Sc16g0005640 Simmondsia chinensis HOM05D003474 ORTHO05D003971 2.2e-23 113.2 199 38.7
PGR004G1795 Punica granatum HOM05D003474 ORTHO05D003971 4.9e-23 112.1 206 35.4
EL10Ac6g15097 Beta vulgaris HOM05D003474 ORTHO05D003971 8.4e-23 111.3 211 36.0
AUR62003788 Chenopodium quinoa HOM05D003474 ORTHO05D003971 1.1e-22 110.9 220 34.1
Lsat_1_v5_gn_5_43380 Lactuca sativa HOM05D003474 ORTHO05D003971 1.1e-22 110.9 198 36.9
PSO541G6092 Papaver somniferum HOM05D003474 ORTHO05D003971 2.5e-22 109.8 197 36.5
AUR62002014 Chenopodium quinoa HOM05D003474 ORTHO05D003971 3.2e-22 109.4 212 33.0
ECA246G4897 Erigeron canadensis HOM05D003474 ORTHO05D003971 3.2e-22 109.4 199 34.2
A10p27350 Brassica napus HOM05D003474 ORTHO05D003971 7.1e-22 108.2 197 31.5
BcaC04g19322 Brassica carinata HOM05D003474 ORTHO05D003971 9.3e-22 107.8 197 31.5
C09p67210 Brassica napus HOM05D003474 ORTHO05D003971 9.3e-22 107.8 197 31.5
BraA06t26118Z Brassica rapa HOM05D003474 ORTHO05D003971 1.2e-21 107.5 201 36.3
BcaB08g37131 Brassica carinata HOM05D003474 ORTHO05D003971 2.1e-21 106.7 196 33.2
DCAR_003501 Daucus carota HOM05D003474 ORTHO05D003971 7.9e-21 104.8 196 32.1
Carub.0008s2587 Capsella rubella HOM05D003474 ORTHO05D003971 1.3e-20 104.0 189 36.0
DCAR_003502 Daucus carota HOM05D003474 ORTHO05D003971 1.3e-20 104.0 198 34.3
BcaC01g02734 Brassica carinata HOM05D003474 ORTHO05D003971 1.8e-20 103.6 197 35.0
C03p61160 Brassica napus HOM05D003474 ORTHO05D003971 1.8e-20 103.6 197 35.0
BolC3t18376H Brassica oleracea HOM05D003474 ORTHO05D003971 1.8e-20 103.6 197 35.0
AL6G20700 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 2.3e-20 103.2 154 38.3
BraA10t44786Z Brassica rapa HOM05D003474 ORTHO05D003971 2.3e-20 103.2 197 30.5
Carub.0006s0867 Capsella rubella HOM05D003474 ORTHO05D003971 2.3e-20 103.2 159 37.7
CARHR203080 Cardamine hirsuta HOM05D003474 ORTHO05D003971 5.1e-20 102.1 169 34.3
Sp6g33190 Schrenkiella parvula HOM05D003474 ORTHO05D003971 5.1e-20 102.1 200 34.5
AT5G10210 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 8.7e-20 101.3 194 34.5
BolC9t59492H Brassica oleracea HOM05D003474 ORTHO05D003971 8.7e-20 101.3 197 30.5
Sp2g28110 Schrenkiella parvula HOM05D003474 ORTHO05D003971 8.7e-20 101.3 204 33.3
AL8G42540 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 1.1e-19 100.9 190 34.7
Thhalv10005637m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 1.1e-19 100.9 197 31.5
Dinv13182 Davidia involucrata HOM05D003474 ORTHO05D003971 2.5e-19 99.8 139 39.6
Migut.H02362 Erythranthe guttata HOM05D003474 ORTHO05D003971 2.5e-19 99.8 220 34.5
AT5G65030 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 5.7e-19 98.6 196 33.2
CARHR293740 Cardamine hirsuta HOM05D003474 ORTHO05D003971 5.7e-19 98.6 208 32.7
ClCG01G018790 Citrullus lanatus HOM05D003474 ORTHO05D003971 5.7e-19 98.6 204 35.8
Thhalv10014734m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 9.7e-19 97.8 173 33.5
BcaB02g09856 Brassica carinata HOM05D003474 ORTHO05D003971 1.3e-18 97.4 196 32.1
QL06p049605 Quercus lobata HOM05D003474 ORTHO05D003971 1.3e-18 97.4 101 52.5
A06p31850 Brassica napus HOM05D003474 ORTHO05D003971 2.2e-18 96.7 170 35.3
SalBow5G3228 Salvia bowleyana HOM05D003474 ORTHO05D003971 2.2e-18 96.7 201 34.3
SalBow5G0419 Salvia bowleyana HOM05D003474 ORTHO05D003971 3.7e-18 95.9 192 33.9
SalBow5G4466 Salvia bowleyana HOM05D003474 ORTHO05D003971 3.7e-18 95.9 192 33.9
DCAR_003503 Daucus carota HOM05D003474 ORTHO05D003971 3.1e-17 92.8 179 34.1
Aa31LG3G16930 Aethionema arabicum HOM05D003474 ORTHO05D003971 9.0e-17 91.3 186 31.7
Migut.L00118 Erythranthe guttata HOM05D003474 ORTHO05D003971 9.0e-17 91.3 197 32.0
Sabra07G0076400 Salix brachista HOM05D003474 ORTHO05D003971 1.5e-16 90.5 151 36.4
SalBow3G2422 Salvia bowleyana HOM05D003474 ORTHO05D003971 5.9e-16 88.6 199 33.2
SalBow5G1505 Salvia bowleyana HOM05D003474 ORTHO05D003971 5.0e-15 85.5 104 41.3
BcaB08g37129 Brassica carinata HOM05D003474 ORTHO05D003971 6.1e-13 78.6 99 38.4
Sopen04g025000 Solanum pennellii HOM05D003474 ORTHO05D003971 1.0e-12 77.8 125 38.4
Peaxi162Scf00212g00111 Petunia axillaris HOM05D003474 ORTHO05D003971 3.9e-12 75.9 80 45.0
Nitab4.5_0006517g0020 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.1e-11 74.3 139 34.5
BcaC04g19323 Brassica carinata HOM05D003474 ORTHO05D003971 5.7e-11 72.0 88 38.6
MELO3C007759.2 Cucumis melo HOM05D003474 ORTHO05D003971 5.7e-11 72.0 176 29.5
Solyc04g055130.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 5.7e-11 72.0 125 36.0
PGSC0003DMG400001890 Solanum tuberosum HOM05D003474 ORTHO05D003971 1.3e-10 70.9 132 35.6
DCAR_003504 Daucus carota HOM05D003474 ORTHO05D003971 2.8e-10 69.7 172 29.7
PGSC0003DMG400001892 Solanum tuberosum HOM05D003474 ORTHO05D003971 8.2e-10 68.2 130 36.2
Solyc04g055140.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 4.1e-09 65.9 131 33.6
Lalb_Chr23g0277361 Lupinus albus HOM05D003474 ORTHO05D003971 1.5e-08 63.9 55 67.3
Peaxi162Scf00212g00105 Petunia axillaris HOM05D003474 ORTHO05D003971 2.0e-08 63.5 129 31.0
SEGI_20067 Sequoiadendron giganteum HOM05D003474 ORTHO05D003971 1.3e-07 60.8 182 29.1
Solyc04g055150.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 2.2e-07 60.1 131 32.1
Sopen04g025010 Solanum pennellii HOM05D003474 ORTHO05D003971 2.9e-07 59.7 131 32.1
Lalb_Chr23g0277401 Lupinus albus HOM05D003474 ORTHO05D003971 5.0e-07 58.9 54 55.6
Lalb_Chr23g0277391 Lupinus albus HOM05D003474 ORTHO05D003971 1.4e-06 57.4 49 59.2


User provided reference genes

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