Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16530_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 4.4e-112 407.9 196 100.0
Ca_16531_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 7.0e-110 400.6 196 98.5
Ca_16532_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 2.6e-109 398.7 196 98.0
Ca_16533_v3 Cicer arietinum L. HOM05D003474 ORTHO05D003971 9.4e-107 390.2 194 96.4
Medtr3g087280 Medicago truncatula HOM05D003474 ORTHO05D003971 2.9e-92 342.0 200 83.0
Medtr3g087275 Medicago truncatula HOM05D003474 ORTHO05D003971 4.0e-89 331.6 200 82.5
TPR.G17847 Trifolium pratense HOM05D003474 ORTHO05D003971 4.0e-89 331.6 200 81.0
TPR.G17845 Trifolium pratense HOM05D003474 ORTHO05D003971 3.4e-88 328.6 200 80.0
TPR.G17848 Trifolium pratense HOM05D003474 ORTHO05D003971 3.4e-88 328.6 196 80.1
TPR.G17834 Trifolium pratense HOM05D003474 ORTHO05D003971 5.4e-86 321.2 200 78.0
Medtr3g087278 Medicago truncatula HOM05D003474 ORTHO05D003971 1.2e-85 320.1 194 78.4
Psat5g089920 Pisum sativum HOM05D003474 ORTHO05D003971 7.8e-85 317.4 200 77.0
Psat5g089840 Pisum sativum HOM05D003474 ORTHO05D003971 3.8e-84 315.1 193 79.3
Medtr3g087325 Medicago truncatula HOM05D003474 ORTHO05D003971 1.5e-83 313.2 200 77.0
Medtr3g087270 Medicago truncatula HOM05D003474 ORTHO05D003971 4.7e-82 308.1 194 75.3
Medtr3g087330 Medicago truncatula HOM05D003474 ORTHO05D003971 1.0e-81 307.0 200 74.5
Psat5g089720 Pisum sativum HOM05D003474 ORTHO05D003971 1.0e-81 307.0 200 76.0
TPR.G17829 Trifolium pratense HOM05D003474 ORTHO05D003971 2.3e-81 305.8 200 75.0
Psat5g089880 Pisum sativum HOM05D003474 ORTHO05D003971 3.0e-81 305.4 193 77.7
TPR.G17835 Trifolium pratense HOM05D003474 ORTHO05D003971 9.2e-78 293.9 200 74.0
Psat5g089800 Pisum sativum HOM05D003474 ORTHO05D003971 1.7e-76 289.7 193 73.1
Glyma.18G017500 Glycine max HOM05D003474 ORTHO05D003971 8.6e-68 260.8 201 66.7
Glyma.11G239900 Glycine max HOM05D003474 ORTHO05D003971 2.1e-66 256.1 201 64.2
VMungo1383G0909 Vigna mungo HOM05D003474 ORTHO05D003971 7.1e-62 241.1 202 61.4
TPR.G17838 Trifolium pratense HOM05D003474 ORTHO05D003971 1.9e-59 233.0 200 61.0
Lalb_Chr23g0277351 Lupinus albus HOM05D003474 ORTHO05D003971 4.3e-59 231.9 203 62.6
Lj6g0005521 Lotus japonicus HOM05D003474 ORTHO05D003971 5.6e-59 231.5 199 61.3
Lalb_Chr08g0231081 Lupinus albus HOM05D003474 ORTHO05D003971 1.4e-57 226.9 202 63.9
Lj6g0012852 Lotus japonicus HOM05D003474 ORTHO05D003971 1.2e-56 223.8 200 60.0
Lj6g0019645 Lotus japonicus HOM05D003474 ORTHO05D003971 2.6e-56 222.6 199 60.3
Medtr3g087300 Medicago truncatula HOM05D003474 ORTHO05D003971 2.6e-56 222.6 197 61.9
Lalb_Chr08g0231071 Lupinus albus HOM05D003474 ORTHO05D003971 1.4e-54 216.9 203 59.1
Phvul.001G251900 Phaseolus vulgaris HOM05D003474 ORTHO05D003971 4.7e-50 201.8 165 63.0
CiPaw.04G099000 Carya illinoinensis HOM05D003474 ORTHO05D003971 1.1e-38 164.1 191 46.6
FAN23G2065 Fragaria x ananassa HOM05D003474 ORTHO05D003971 7.1e-38 161.4 196 45.9
FvH4_1g20980 Fragaria vesca HOM05D003474 ORTHO05D003971 9.3e-38 161.0 196 45.9
Sabra07G0076200 Salix brachista HOM05D003474 ORTHO05D003971 2.7e-37 159.5 197 44.2
Sabra07G0076300 Salix brachista HOM05D003474 ORTHO05D003971 2.7e-37 159.5 197 44.2
FAN19G2364 Fragaria x ananassa HOM05D003474 ORTHO05D003971 3.5e-37 159.1 196 45.4
Sabra07G0075900 Salix brachista HOM05D003474 ORTHO05D003971 6.0e-37 158.3 197 44.2
Sabra07G0076000 Salix brachista HOM05D003474 ORTHO05D003971 6.0e-37 158.3 197 44.2
FAN28G0803 Fragaria x ananassa HOM05D003474 ORTHO05D003971 7.9e-37 157.9 196 44.4
QL06p049633 Quercus lobata HOM05D003474 ORTHO05D003971 7.9e-37 157.9 195 46.2
QL06p049587 Quercus lobata HOM05D003474 ORTHO05D003971 1.0e-36 157.5 195 45.1
Potri.007G092300 Populus trichocarpa HOM05D003474 ORTHO05D003971 1.8e-36 156.8 197 43.7
QL06p049618 Quercus lobata HOM05D003474 ORTHO05D003971 3.0e-36 156.0 195 45.6
Sabra07G0076100 Salix brachista HOM05D003474 ORTHO05D003971 3.9e-36 155.6 197 43.7
RcHm_v2.0_Chr2g0114461 Rosa chinensis HOM05D003474 ORTHO05D003971 6.7e-36 154.8 195 43.1
Thecc.01G102400 Theobroma cacao HOM05D003474 ORTHO05D003971 8.7e-36 154.5 201 44.3
FAN26G3130 Fragaria x ananassa HOM05D003474 ORTHO05D003971 1.5e-35 153.7 196 45.4
Prupe.6G186100 Prunus persica HOM05D003474 ORTHO05D003971 7.4e-35 151.4 198 45.5
QL06p049593 Quercus lobata HOM05D003474 ORTHO05D003971 7.4e-35 151.4 195 44.6
Cfa002670 Carpinus fangiana HOM05D003474 ORTHO05D003971 9.6e-35 151.0 200 43.0
Ciclev10027277m.g Citrus clementina HOM05D003474 ORTHO05D003971 1.6e-34 150.2 199 43.7
RcHm_v2.0_Chr2g0114471 Rosa chinensis HOM05D003474 ORTHO05D003971 1.6e-34 150.2 197 42.6
Gohir.A11G201900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 2.8e-34 149.4 201 43.8
Gorai.007G239100 Gossypium raimondii HOM05D003474 ORTHO05D003971 1.8e-33 146.7 198 44.9
COL.COLO4_09957 Corchorus olitorius HOM05D003474 ORTHO05D003971 3.1e-33 146.0 204 42.6
Duzib187G1721 Durio zibethinus HOM05D003474 ORTHO05D003971 3.1e-33 146.0 200 46.0
CSS0038157 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 5.3e-33 145.2 205 41.5
Gohir.D11G221900 Gossypium hirsutum HOM05D003474 ORTHO05D003971 6.9e-33 144.8 201 43.8
Potri.005G076100 Populus trichocarpa HOM05D003474 ORTHO05D003971 1.5e-32 143.7 195 43.1
Hma1.2p1_0047F.1_g027910 Hydrangea macrophylla HOM05D003474 ORTHO05D003971 2.6e-32 142.9 197 42.1
Nn1g05334 Nelumbo nucifera HOM05D003474 ORTHO05D003971 4.5e-32 142.1 200 41.5
PGSC0003DMG400001891 Solanum tuberosum HOM05D003474 ORTHO05D003971 7.6e-32 141.4 212 40.1
Sed0016843 Sechium edule HOM05D003474 ORTHO05D003971 9.9e-32 141.0 193 42.5
Lj4P889T19 Lonicera japonica HOM05D003474 ORTHO05D003971 2.2e-31 139.8 194 40.7
Duzib147G1557 Durio zibethinus HOM05D003474 ORTHO05D003971 6.4e-31 138.3 197 44.2
TAR381G0511 Trochodendron aralioides HOM05D003474 ORTHO05D003971 2.5e-30 136.3 197 41.6
CiPaw.03G141500 Carya illinoinensis HOM05D003474 ORTHO05D003971 4.2e-30 135.6 208 40.4
CsaV3_6G045460 Cucumis sativus L. HOM05D003474 ORTHO05D003971 9.3e-30 134.4 192 40.6
CAN.G441.1 Capsicum annuum HOM05D003474 ORTHO05D003971 1.6e-29 133.7 199 41.2
Aqoxy6G00810 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 2.7e-29 132.9 195 40.5
Manes.12G135500 Manihot esculenta HOM05D003474 ORTHO05D003971 3.5e-29 132.5 210 40.5
Haze_24940 Corylus avellana HOM05D003474 ORTHO05D003971 7.9e-29 131.3 167 41.9
Nn5g30135 Nelumbo nucifera HOM05D003474 ORTHO05D003971 1.0e-28 131.0 208 38.9
CSS0039995 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.8e-28 130.2 208 38.5
CSS0044421 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 1.8e-28 130.2 211 38.4
Oeu056606.1 Olea europaea HOM05D003474 ORTHO05D003971 1.8e-28 130.2 202 41.6
Peaxi162Scf00611g00012 Petunia axillaris HOM05D003474 ORTHO05D003971 2.3e-28 129.8 207 38.2
TWI74G0170 Tripterygium wilfordii HOM05D003474 ORTHO05D003971 2.3e-28 129.8 205 40.5
Cc07_g15300 Coffea canephora HOM05D003474 ORTHO05D003971 5.1e-28 128.6 196 40.3
CSS0002095 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 6.7e-28 128.3 211 37.9
Oeu002403.1 Olea europaea HOM05D003474 ORTHO05D003971 1.1e-27 127.5 196 40.3
ClCG01G018800 Citrullus lanatus HOM05D003474 ORTHO05D003971 3.3e-27 125.9 199 34.7
Nitab4.5_0000104g0070 Nicotiana tabacum HOM05D003474 ORTHO05D003971 3.3e-27 125.9 176 38.6
CSS0009549 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 9.6e-27 124.4 211 37.4
Atru.chr4.70 Acer truncatum HOM05D003474 ORTHO05D003971 1.3e-26 124.0 235 37.9
TAR625G0209 Trochodendron aralioides HOM05D003474 ORTHO05D003971 1.3e-26 124.0 198 41.4
Eucgr.I00429 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.6e-26 123.6 206 37.9
Eucgr.I00430 Eucalyptus grandis HOM05D003474 ORTHO05D003971 1.6e-26 123.6 206 37.9
Nitab4.5_0000104g0120 Nicotiana tabacum HOM05D003474 ORTHO05D003971 1.6e-26 123.6 173 39.9
Sopen03g021520 Solanum pennellii HOM05D003474 ORTHO05D003971 6.2e-26 121.7 207 35.3
THA.LOC104804926 Tarenaya hassleriana HOM05D003474 ORTHO05D003971 1.1e-25 120.9 181 35.9
TAR625G1533 Trochodendron aralioides HOM05D003474 ORTHO05D003971 5.3e-25 118.6 196 42.3
Cpa.g.sc213.15 Carica papaya HOM05D003474 ORTHO05D003971 9.0e-25 117.9 199 38.2
Cfa002671 Carpinus fangiana HOM05D003474 ORTHO05D003971 9.0e-25 117.9 198 37.9
PSO781G0183 Papaver somniferum HOM05D003474 ORTHO05D003971 9.0e-25 117.9 197 37.1
Solyc03g078620.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 9.0e-25 117.9 212 35.4
Atru.chr4.72 Acer truncatum HOM05D003474 ORTHO05D003971 2.0e-24 116.7 239 36.0
Atru.chr4.73 Acer truncatum HOM05D003474 ORTHO05D003971 2.0e-24 116.7 239 36.0
CANSAT73G0001 Cannabis sativa HOM05D003474 ORTHO05D003971 2.0e-24 116.7 222 36.5
PGSC0003DMG400021798 Solanum tuberosum HOM05D003474 ORTHO05D003971 2.0e-24 116.7 205 35.1
PGR004G1795 Punica granatum HOM05D003474 ORTHO05D003971 2.6e-24 116.3 206 35.9
Ah.02g122460 Amaranthus hybridus HOM05D003474 ORTHO05D003971 3.4e-24 115.9 217 36.4
Aqoxy6G00809 Aquilegia oxysepala HOM05D003474 ORTHO05D003971 3.4e-24 115.9 179 34.6
Lsat_1_v5_gn_5_43760 Lactuca sativa HOM05D003474 ORTHO05D003971 3.4e-24 115.9 211 35.5
Rhsim08G0010000 Rhododendron simsii HOM05D003474 ORTHO05D003971 4.5e-24 115.5 197 37.1
CSS0003854 Camellia sinensis var. sinensis HOM05D003474 ORTHO05D003971 7.6e-24 114.8 210 34.3
Lsat_1_v5_gn_5_43320 Lactuca sativa HOM05D003474 ORTHO05D003971 1.0e-23 114.4 193 35.8
Lsat_1_v5_gn_5_43140 Lactuca sativa HOM05D003474 ORTHO05D003971 1.3e-23 114.0 193 35.8
Lsat_1_v5_gn_5_43240 Lactuca sativa HOM05D003474 ORTHO05D003971 1.3e-23 114.0 193 35.8
Lsat_1_v5_gn_5_43280 Lactuca sativa HOM05D003474 ORTHO05D003971 1.3e-23 114.0 193 35.8
CANSAT01G1468 Cannabis sativa HOM05D003474 ORTHO05D003971 2.2e-23 113.2 205 38.5
Nitab4.5_0016805g0010 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.2e-23 113.2 176 37.5
Sc16g0005640 Simmondsia chinensis HOM05D003474 ORTHO05D003971 2.2e-23 113.2 199 39.2
PSO781G0184 Papaver somniferum HOM05D003474 ORTHO05D003971 2.9e-23 112.8 197 35.5
PSO781G0304 Papaver somniferum HOM05D003474 ORTHO05D003971 2.9e-23 112.8 211 33.6
Actinidia28867 Actinidia chinensis HOM05D003474 ORTHO05D003971 3.8e-23 112.5 175 38.9
CANSAT01G0924 Cannabis sativa HOM05D003474 ORTHO05D003971 3.8e-23 112.5 204 38.2
MBI02_g08731_MAGBIO Magnolia biondii HOM05D003474 ORTHO05D003971 3.8e-23 112.5 190 33.7
Sabra05G0062700 Salix brachista HOM05D003474 ORTHO05D003971 4.9e-23 112.1 172 39.5
PSO781G0331 Papaver somniferum HOM05D003474 ORTHO05D003971 8.4e-23 111.3 197 35.5
EL10Ac6g15097 Beta vulgaris HOM05D003474 ORTHO05D003971 1.1e-22 110.9 211 36.0
AUR62003788 Chenopodium quinoa HOM05D003474 ORTHO05D003971 1.1e-22 110.9 220 34.1
Lsat_1_v5_gn_5_43380 Lactuca sativa HOM05D003474 ORTHO05D003971 1.1e-22 110.9 198 36.9
ECA246G4897 Erigeron canadensis HOM05D003474 ORTHO05D003971 3.2e-22 109.4 199 34.2
AUR62002014 Chenopodium quinoa HOM05D003474 ORTHO05D003971 4.2e-22 109.0 212 33.0
A10p27350 Brassica napus HOM05D003474 ORTHO05D003971 1.2e-21 107.5 197 31.5
BraA06t26118Z Brassica rapa HOM05D003474 ORTHO05D003971 1.2e-21 107.5 201 36.3
PSO541G6092 Papaver somniferum HOM05D003474 ORTHO05D003971 1.2e-21 107.5 197 36.0
BcaC04g19322 Brassica carinata HOM05D003474 ORTHO05D003971 1.6e-21 107.1 197 31.5
C09p67210 Brassica napus HOM05D003474 ORTHO05D003971 1.6e-21 107.1 197 31.5
BcaB08g37131 Brassica carinata HOM05D003474 ORTHO05D003971 2.7e-21 106.3 196 33.2
Carub.0008s2587 Capsella rubella HOM05D003474 ORTHO05D003971 1.0e-20 104.4 190 35.3
DCAR_003501 Daucus carota HOM05D003474 ORTHO05D003971 1.0e-20 104.4 196 32.1
BcaC01g02734 Brassica carinata HOM05D003474 ORTHO05D003971 1.8e-20 103.6 197 35.0
C03p61160 Brassica napus HOM05D003474 ORTHO05D003971 1.8e-20 103.6 197 35.0
BolC3t18376H Brassica oleracea HOM05D003474 ORTHO05D003971 1.8e-20 103.6 197 35.0
Carub.0006s0867 Capsella rubella HOM05D003474 ORTHO05D003971 2.3e-20 103.2 159 37.7
BraA10t44786Z Brassica rapa HOM05D003474 ORTHO05D003971 3.9e-20 102.4 197 30.5
AL6G20700 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 5.1e-20 102.1 184 34.8
CARHR203080 Cardamine hirsuta HOM05D003474 ORTHO05D003971 5.1e-20 102.1 169 34.3
AL8G42540 Arabidopsis lyrata HOM05D003474 ORTHO05D003971 6.7e-20 101.7 199 35.2
DCAR_003502 Daucus carota HOM05D003474 ORTHO05D003971 6.7e-20 101.7 198 33.8
Sp2g28110 Schrenkiella parvula HOM05D003474 ORTHO05D003971 6.7e-20 101.7 204 33.8
Sp6g33190 Schrenkiella parvula HOM05D003474 ORTHO05D003971 6.7e-20 101.7 200 34.0
AT5G10210 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 1.1e-19 100.9 167 36.5
Thhalv10005637m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 1.1e-19 100.9 197 31.5
BolC9t59492H Brassica oleracea HOM05D003474 ORTHO05D003971 1.5e-19 100.5 197 30.5
Dinv13182 Davidia involucrata HOM05D003474 ORTHO05D003971 2.5e-19 99.8 139 39.6
Migut.H02362 Erythranthe guttata HOM05D003474 ORTHO05D003971 3.3e-19 99.4 220 34.5
AT5G65030 Arabidopsis thaliana HOM05D003474 ORTHO05D003971 4.3e-19 99.0 196 33.2
CARHR293740 Cardamine hirsuta HOM05D003474 ORTHO05D003971 9.7e-19 97.8 194 30.4
Thhalv10014734m.g Eutrema salsugineum HOM05D003474 ORTHO05D003971 9.7e-19 97.8 173 33.5
BcaB02g09856 Brassica carinata HOM05D003474 ORTHO05D003971 1.3e-18 97.4 196 32.1
QL06p049605 Quercus lobata HOM05D003474 ORTHO05D003971 1.3e-18 97.4 101 52.5
A06p31850 Brassica napus HOM05D003474 ORTHO05D003971 1.6e-18 97.1 170 35.3
ClCG01G018790 Citrullus lanatus HOM05D003474 ORTHO05D003971 3.7e-18 95.9 206 34.0
SalBow5G0419 Salvia bowleyana HOM05D003474 ORTHO05D003971 4.8e-18 95.5 192 33.9
SalBow5G4466 Salvia bowleyana HOM05D003474 ORTHO05D003971 4.8e-18 95.5 192 33.9
SalBow5G3228 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.1e-17 94.4 201 33.8
DCAR_003503 Daucus carota HOM05D003474 ORTHO05D003971 5.3e-17 92.0 179 34.1
Aa31LG3G16930 Aethionema arabicum HOM05D003474 ORTHO05D003971 6.9e-17 91.7 186 31.7
Migut.L00118 Erythranthe guttata HOM05D003474 ORTHO05D003971 1.2e-16 90.9 197 32.0
Sabra07G0076400 Salix brachista HOM05D003474 ORTHO05D003971 7.7e-16 88.2 151 35.8
SalBow3G2422 Salvia bowleyana HOM05D003474 ORTHO05D003971 1.0e-15 87.8 199 33.2
SalBow5G1505 Salvia bowleyana HOM05D003474 ORTHO05D003971 5.0e-15 85.5 104 41.3
BcaB08g37129 Brassica carinata HOM05D003474 ORTHO05D003971 6.1e-13 78.6 99 38.4
Sopen04g025000 Solanum pennellii HOM05D003474 ORTHO05D003971 1.0e-12 77.8 125 38.4
Peaxi162Scf00212g00111 Petunia axillaris HOM05D003474 ORTHO05D003971 3.9e-12 75.9 80 45.0
Nitab4.5_0006517g0020 Nicotiana tabacum HOM05D003474 ORTHO05D003971 2.0e-11 73.6 138 34.1
MELO3C007759.2 Cucumis melo HOM05D003474 ORTHO05D003971 4.3e-11 72.4 176 29.5
BcaC04g19323 Brassica carinata HOM05D003474 ORTHO05D003971 5.7e-11 72.0 88 38.6
Solyc04g055130.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 5.7e-11 72.0 125 36.0
PGSC0003DMG400001890 Solanum tuberosum HOM05D003474 ORTHO05D003971 1.7e-10 70.5 132 34.8
DCAR_003504 Daucus carota HOM05D003474 ORTHO05D003971 4.8e-10 68.9 172 29.7
PGSC0003DMG400001892 Solanum tuberosum HOM05D003474 ORTHO05D003971 8.2e-10 68.2 130 36.2
Lalb_Chr23g0277361 Lupinus albus HOM05D003474 ORTHO05D003971 1.5e-08 63.9 55 67.3
Peaxi162Scf00212g00105 Petunia axillaris HOM05D003474 ORTHO05D003971 2.0e-08 63.5 129 31.0
Solyc04g055140.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 2.0e-08 63.5 131 32.8
SEGI_20067 Sequoiadendron giganteum HOM05D003474 ORTHO05D003971 1.0e-07 61.2 182 29.1
Solyc04g055150.1 Solanum lycopersicum HOM05D003474 ORTHO05D003971 8.5e-07 58.2 131 31.3
Sopen04g025010 Solanum pennellii HOM05D003474 ORTHO05D003971 1.1e-06 57.8 131 31.3
Lalb_Chr23g0277391 Lupinus albus HOM05D003474 ORTHO05D003971 1.4e-06 57.4 49 59.2
Lalb_Chr23g0277401 Lupinus albus HOM05D003474 ORTHO05D003971 5.5e-06 55.5 54 53.7


User provided reference genes

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