Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16525_v3 Cicer arietinum L. HOM05D004626 ORTHO05D005185 7.2e-108 394.0 216 100.0
Psat5g090160 Pisum sativum HOM05D004626 ORTHO05D005185 8.6e-69 264.2 226 66.4
TPR.G17855 Trifolium pratense HOM05D004626 ORTHO05D005185 2.8e-67 259.2 214 67.8
Medtr3g087190 Medicago truncatula HOM05D004626 ORTHO05D005185 3.2e-63 245.7 217 65.4
Lj6g0027398 Lotus japonicus HOM05D004626 ORTHO05D005185 4.1e-63 245.4 216 65.3
Oeu056607.1 Olea europaea HOM05D004626 ORTHO05D005185 4.6e-62 241.9 176 71.0
Dinv21908 Davidia involucrata HOM05D004626 ORTHO05D005185 1.5e-60 236.9 169 73.4
GSVIVG01002466001 Vitis vinifera HOM05D004626 ORTHO05D005185 3.3e-60 235.7 169 70.4
CiPaw.03G141900 Carya illinoinensis HOM05D004626 ORTHO05D005185 7.3e-60 234.6 170 72.9
Cfa002662 Carpinus fangiana HOM05D004626 ORTHO05D005185 1.6e-59 233.4 172 70.9
Haze_24931 Corylus avellana HOM05D004626 ORTHO05D005185 1.6e-59 233.4 172 70.9
Nn2g14516 Nelumbo nucifera HOM05D004626 ORTHO05D005185 4.7e-59 231.9 166 74.7
CsaV3_4G008860 Cucumis sativus L. HOM05D004626 ORTHO05D005185 8.1e-59 231.1 173 70.5
TAR628G0369 Trochodendron aralioides HOM05D004626 ORTHO05D005185 8.1e-59 231.1 171 69.6
CANSAT01G3216 Cannabis sativa HOM05D004626 ORTHO05D005185 1.1e-58 230.7 184 68.5
ClCG10G009000 Citrullus lanatus HOM05D004626 ORTHO05D005185 2.3e-58 229.6 173 71.1
Phvul.L001740 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 4.0e-58 228.8 171 71.9
Phvul.L002040 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 4.0e-58 228.8 171 71.9
Phvul.008G217800 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 6.8e-58 228.0 171 71.9
MELO3C018951.2 Cucumis melo HOM05D004626 ORTHO05D005185 1.5e-57 226.9 173 69.9
Eucgr.I00432 Eucalyptus grandis HOM05D004626 ORTHO05D005185 1.5e-57 226.9 164 68.3
Migut.H02360 Erythranthe guttata HOM05D004626 ORTHO05D005185 2.0e-57 226.5 175 68.6
Nitab4.5_0000004g0320 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.0e-57 226.5 174 66.7
TAR381G1723 Trochodendron aralioides HOM05D004626 ORTHO05D005185 2.6e-57 226.1 168 70.8
SGA_v2.0_scaffold54G19499 Striga asiatica HOM05D004626 ORTHO05D005185 4.4e-57 225.3 175 67.4
Lalb_Chr11g0075381 Lupinus albus HOM05D004626 ORTHO05D005185 7.5e-57 224.6 179 62.0
MSTRG.2568 Avicennia marina HOM05D004626 ORTHO05D005185 9.8e-57 224.2 175 67.4
Dinv13189 Davidia involucrata HOM05D004626 ORTHO05D005185 1.3e-56 223.8 151 78.1
Nitab4.5_0002169g0010 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.3e-56 223.8 175 66.9
Prupe.6G187100 Prunus persica HOM05D004626 ORTHO05D005185 1.3e-56 223.8 164 69.5
Nitab4.5_0003026g0030 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.2e-56 223.0 175 66.9
Hund16286 Selenicereus undatus HOM05D004626 ORTHO05D005185 2.2e-56 223.0 172 69.2
DCAR_014224 Daucus carota HOM05D004626 ORTHO05D005185 2.9e-56 222.6 183 67.8
Manes.12G134800 Manihot esculenta HOM05D004626 ORTHO05D005185 2.9e-56 222.6 169 68.0
Solyc11g011140.2 Solanum lycopersicum HOM05D004626 ORTHO05D005185 3.7e-56 222.2 184 64.7
Sopen11g005900 Solanum pennellii HOM05D004626 ORTHO05D005185 3.7e-56 222.2 184 64.7
Cc07_g15200 Coffea canephora HOM05D004626 ORTHO05D005185 4.9e-56 221.9 180 67.8
Sed0012532 Sechium edule HOM05D004626 ORTHO05D005185 8.3e-56 221.1 175 68.6
Hund13624 Selenicereus undatus HOM05D004626 ORTHO05D005185 8.3e-56 221.1 171 67.3
Sc20g0005870 Simmondsia chinensis HOM05D004626 ORTHO05D005185 8.3e-56 221.1 164 67.7
SGA_v2.0_scaffold111G31515 Striga asiatica HOM05D004626 ORTHO05D005185 1.9e-55 219.9 176 65.3
Ah.02g122510 Amaranthus hybridus HOM05D004626 ORTHO05D005185 2.4e-55 219.5 165 69.1
Thecc.01G101400 Theobroma cacao HOM05D004626 ORTHO05D005185 3.2e-55 219.2 172 69.2
Glyma.18G017100 Glycine max HOM05D004626 ORTHO05D005185 7.1e-55 218.0 180 66.1
MBI05_g19353_MAGBIO Magnolia biondii HOM05D004626 ORTHO05D005185 7.1e-55 218.0 131 81.7
Lsat_1_v5_gn_4_141400 Lactuca sativa HOM05D004626 ORTHO05D005185 9.2e-55 217.6 177 67.2
CAN.G222.27 Capsicum annuum HOM05D004626 ORTHO05D005185 1.2e-54 217.2 182 65.4
ECA232G0540 Erigeron canadensis HOM05D004626 ORTHO05D001353 1.6e-54 216.9 181 64.1
Duzib147G1109 Durio zibethinus HOM05D004626 ORTHO05D005185 2.1e-54 216.5 169 69.2
CDE10G0605 Ceratophyllum demersum HOM05D004626 ORTHO05D005185 2.7e-54 216.1 176 67.0
QL06p049512 Quercus lobata HOM05D004626 ORTHO05D005185 7.8e-54 214.5 134 79.1
HanXRQChr10g0305361 Helianthus annuus HOM05D004626 ORTHO05D005185 1.0e-53 214.2 181 64.1
Sc16g0005030 Simmondsia chinensis HOM05D004626 ORTHO05D005185 1.7e-53 213.4 164 65.9
VMungo0647G0150 Vigna mungo HOM05D004626 ORTHO05D005185 2.3e-53 213.0 163 69.3
FAN26G0520 Fragaria x ananassa HOM05D004626 ORTHO05D005185 3.0e-53 212.6 169 68.0
Actinidia28864 Actinidia chinensis HOM05D004626 ORTHO05D005185 3.9e-53 212.2 189 64.0
AUR62002008 Chenopodium quinoa HOM05D004626 ORTHO05D005185 3.9e-53 212.2 176 63.6
AUR62003794 Chenopodium quinoa HOM05D004626 ORTHO05D005185 3.9e-53 212.2 176 63.6
PGR102G1283 Punica granatum HOM05D004626 ORTHO05D005185 3.9e-53 212.2 166 67.5
Gohir.A11G201300 Gossypium hirsutum HOM05D004626 ORTHO05D005185 5.1e-53 211.8 171 66.1
FAN19G0994 Fragaria x ananassa HOM05D004626 ORTHO05D005185 6.6e-53 211.5 166 69.3
Gorai.007G238600 Gossypium raimondii HOM05D004626 ORTHO05D005185 6.6e-53 211.5 172 65.1
RcHm_v2.0_Chr2g0113491 Rosa chinensis HOM05D004626 ORTHO05D005185 8.6e-53 211.1 167 67.7
Gohir.D11G221600 Gossypium hirsutum HOM05D004626 ORTHO05D005185 1.1e-52 210.7 174 64.4
TWI53G1689 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 1.5e-52 210.3 174 63.8
Ciclev10026391m.g Citrus clementina HOM05D004626 ORTHO05D005185 1.9e-52 209.9 167 66.5
Cpa.g.sc974.3 Carica papaya HOM05D004626 ORTHO05D005185 2.5e-52 209.5 170 67.6
MD01G1030100 Malus domestica HOM05D004626 ORTHO05D005185 2.5e-52 209.5 172 65.7
FvH4_1g20880 Fragaria vesca HOM05D004626 ORTHO05D005185 3.3e-52 209.1 186 62.9
FAN23G0429 Fragaria x ananassa HOM05D004626 ORTHO05D005185 5.6e-52 208.4 166 68.1
TWI77G0829 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 1.6e-51 206.8 153 70.6
Duzib264G0371 Durio zibethinus HOM05D004626 ORTHO05D005185 8.1e-51 204.5 144 74.3
PSO781G0234 Papaver somniferum HOM05D004626 ORTHO05D005185 8.1e-51 204.5 185 60.0
THA.LOC104807692 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 8.1e-51 204.5 173 65.3
Aqoxy6G00796 Aquilegia oxysepala HOM05D004626 ORTHO05D005185 1.4e-50 203.8 133 75.2
arahy.Tifrunner.gnm1.ann1.ZXJH7W Arachis hypogaea HOM05D004626 ORTHO05D005185 2.3e-50 203.0 223 55.2
PSO541G2613 Papaver somniferum HOM05D004626 ORTHO05D005185 2.3e-50 203.0 184 59.2
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 4.0e-50 202.2 179 61.5
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 4.0e-50 202.2 179 61.5
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 4.0e-50 202.2 179 61.5
Lj4A891T55 Lonicera japonica HOM05D004626 ORTHO05D005185 4.0e-50 202.2 163 66.9
unitig_749.g13443 Utricularia gibba HOM05D004626 ORTHO05D005185 4.0e-50 202.2 180 59.4
CSS0038413 Camellia sinensis var. sinensis HOM05D004626 ORTHO05D005185 5.2e-50 201.8 145 72.4
Potri.005G075500 Populus trichocarpa HOM05D004626 ORTHO05D005185 8.9e-50 201.1 186 59.7
EL10Ac6g15105 Beta vulgaris HOM05D004626 ORTHO05D005185 1.5e-49 200.3 164 62.2
ATR0693G394 Amborella trichopoda HOM05D004626 ORTHO05D005185 2.0e-49 199.9 164 61.0
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 2.0e-49 199.9 178 61.8
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 2.0e-49 199.9 178 61.8
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 4.4e-49 198.7 177 62.1
MD15G1324000 Malus domestica HOM05D004626 ORTHO05D005185 5.8e-49 198.4 172 61.6
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 9.9e-49 197.6 175 60.6
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 9.9e-49 197.6 177 61.6
Rhsim08G0010500 Rhododendron simsii HOM05D004626 ORTHO05D005185 1.3e-48 197.2 156 68.6
arahy.Tifrunner.gnm1.ann1.IYB3ER Arachis hypogaea HOM05D004626 ORTHO05D005185 4.9e-48 195.3 214 54.2
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 8.4e-48 194.5 176 59.1
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 1.1e-47 194.1 180 59.4
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 1.4e-47 193.7 176 60.8
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 4.1e-47 192.2 175 59.4
TAR381G1658 Trochodendron aralioides HOM05D004626 ORTHO05D005185 4.1e-47 192.2 120 77.5
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 5.4e-47 191.8 175 59.4
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 2.1e-46 189.9 176 60.2
BolC7t46695H Brassica oleracea HOM05D004626 ORTHO05D005185 7.8e-46 188.0 176 58.0
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 1.0e-45 187.6 178 56.2
Nitab4.5_0012380g0020 Nicotiana tabacum HOM05D004626 ORTHO05D005185 3.0e-45 186.0 167 62.9
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 1.5e-44 183.7 177 57.6
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 1.5e-44 183.7 177 57.6
Hma1.2p1_0308F.1_g120190 Hydrangea macrophylla HOM05D004626 ORTHO05D005185 1.9e-44 183.3 150 65.3
SHI34078 Sapria himalayana HOM05D004626 ORTHO05D005185 3.3e-44 182.6 168 57.7
Atru.chr4.63 Acer truncatum HOM05D004626 ORTHO05D005185 1.2e-43 180.6 135 68.1
BcaNung03404 Brassica carinata HOM05D004626 ORTHO05D005185 1.6e-43 180.3 172 57.0
FAN28G0327 Fragaria x ananassa HOM05D004626 ORTHO05D005185 4.7e-43 178.7 169 61.5
COL.COLO4_09965 Corchorus olitorius HOM05D004626 ORTHO05D005185 6.2e-43 178.3 102 87.3
SEGI_37892 Sequoiadendron giganteum HOM05D004626 ORTHO05D005185 4.0e-42 175.6 138 64.5
HPP92_019309 Vanilla planifolia HOM05D004626 ORTHO05D005185 4.0e-42 175.6 216 50.5
Sabra05G0062000 Salix brachista HOM05D004626 ORTHO05D005185 5.8e-41 171.8 170 55.3
TPR.G17173 Trifolium pratense HOM05D004626 ORTHO05D005185 3.8e-40 169.1 91 91.2
Nitab4.5_0000308g0400 Nicotiana tabacum HOM05D004626 ORTHO05D005185 3.9e-37 159.1 175 52.6
Peaxi162Scf00611g00021 Petunia axillaris HOM05D004626 ORTHO05D005185 5.6e-36 155.2 139 61.2
DCAR_001782 Daucus carota HOM05D004626 ORTHO05D005185 9.6e-36 154.5 142 59.2
arahy.Tifrunner.gnm1.ann1.VCFG2H Arachis hypogaea HOM05D004626 ORTHO05D005185 3.1e-34 149.4 102 72.5
MD06G1167700 Malus domestica HOM05D004626 ORTHO05D005185 4.0e-34 149.1 130 59.2
Os07g0415200 Oryza sativa ssp. japonica HOM05D004626 ORTHO05D005185 9.0e-34 147.9 161 50.3
Zm00001eb120260 Zea mays HOM05D004626 ORTHO05D005185 1.7e-32 143.7 161 49.1
Cfa005597 Carpinus fangiana HOM05D004626 ORTHO05D005185 1.3e-29 134.0 107 61.7
Pp3c1_13270 Physcomitrium patens HOM05D004626 ORTHO05D005185 1.8e-29 133.7 108 61.1
QL11p020935 Quercus lobata HOM05D004626 ORTHO05D005185 3.9e-29 132.5 101 65.3
vmacro18600 Vaccinium macrocarpon HOM05D004626 ORTHO05D005185 5.1e-29 132.1 113 66.4
QL11p021166 Quercus lobata HOM05D004626 ORTHO05D005185 8.7e-29 131.3 101 64.4
Mapoly0065s0037 Marchantia polymorpha HOM05D004626 ORTHO05D005185 1.9e-28 130.2 117 56.4
CiPaw.05G035400 Carya illinoinensis HOM05D004626 ORTHO05D005185 1.3e-27 127.5 107 57.9
VMungo1383G1685 Vigna mungo HOM05D004626 ORTHO05D005185 3.6e-27 125.9 71 85.9
Glyma.08G135700 Glycine max HOM05D004626 ORTHO05D005185 4.8e-27 125.6 106 63.2
Glyma.05G178600 Glycine max HOM05D004626 ORTHO05D005185 5.3e-26 122.1 102 63.7
Nn1g04969 Nelumbo nucifera HOM05D004626 ORTHO05D005185 2.6e-25 119.8 112 58.0
SalBow3G4134 Salvia bowleyana HOM05D004626 ORTHO05D005185 9.9e-25 117.9 121 50.4
Lj4g0016107 Lotus japonicus HOM05D004626 ORTHO05D005185 2.2e-24 116.7 110 52.7
Potri.007G093100 Populus trichocarpa HOM05D004626 ORTHO05D005185 8.4e-24 114.8 108 57.4
Medtr3g079680 Medicago truncatula HOM05D004626 ORTHO05D005185 1.4e-23 114.0 168 46.4
Phvul.002G256100 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.4e-23 114.0 103 57.3
VMungo0251G0963 Vigna mungo HOM05D004626 ORTHO05D005185 3.2e-23 112.8 103 59.2
TPR.G6292 Trifolium pratense HOM05D004626 ORTHO05D005185 5.1e-21 105.5 106 53.8
THA.LOC104818439 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 5.6e-20 102.1 98 52.0
Nitab4.5_0006375g0050 Nicotiana tabacum HOM05D004626 ORTHO05D005185 7.4e-20 101.7 84 70.2
Lalb_Chr12g0203831 Lupinus albus HOM05D004626 ORTHO05D005185 1.6e-19 100.5 80 60.0
Lalb_Chr22g0353781 Lupinus albus HOM05D004626 ORTHO05D005185 8.1e-19 98.2 71 64.8
Gohir.A02G143100 Gossypium hirsutum HOM05D004626 ORTHO05D005185 5.3e-18 95.5 64 78.1
Medtr8g090225 Medicago truncatula HOM05D004626 ORTHO05D005185 1.2e-17 94.4 101 52.5
AagrBONN_evm.TU.Sc2ySwM_117.40 Anthoceros agrestis HOM05D004626 ORTHO05D005185 1.5e-17 94.0 113 45.1
Gohir.D03G037250 Gossypium hirsutum HOM05D004626 ORTHO05D005185 2.6e-17 93.2 67 73.1
SMO134G0295 Selaginella moellendorffii HOM05D004626 ORTHO05D005185 1.3e-16 90.9 98 43.9
Ciclev10029799m.g Citrus clementina HOM05D004626 ORTHO05D005185 1.6e-14 84.0 89 51.7
MCO11G885 Micromonas commoda HOM05D004626 ORTHO05D005185 6.0e-14 82.0 128 35.2


User provided reference genes

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