Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 7.0e-173 610.5 311 100.0
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.1e-165 586.6 311 95.2
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 1.3e-163 579.7 311 93.9
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 4.3e-162 574.7 311 93.6
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.1e-149 533.5 308 85.7
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 3.5e-148 528.5 311 85.2
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 3.0e-147 525.4 308 85.1
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 5.1e-147 524.6 308 84.1
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 3.4e-143 511.9 308 82.5
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 4.9e-142 508.1 311 82.3
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 5.4e-141 504.6 311 81.0
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 5.4e-141 504.6 311 81.0
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 5.6e-130 468.0 302 76.8
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 9.0e-128 460.7 297 76.4
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.4e-125 453.4 306 72.2
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 4.6e-124 448.4 303 73.3
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 7.9e-124 447.6 306 73.2
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 1.0e-123 447.2 302 73.2
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 1.3e-123 446.8 302 73.2
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 2.3e-123 446.0 308 72.4
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 1.1e-122 443.7 302 72.8
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 4.3e-122 441.8 303 72.9
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 8.2e-121 437.6 306 71.9
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 1.4e-120 436.8 309 70.9
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 1.8e-120 436.4 303 70.6
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 1.8e-120 436.4 305 71.5
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.4e-120 436.0 303 71.3
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 4.0e-120 435.3 302 71.2
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 4.0e-120 435.3 302 72.2
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 5.8e-119 431.4 297 73.1
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 7.6e-119 431.0 306 72.2
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.8e-118 428.7 293 73.7
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 3.8e-118 428.7 293 73.7
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 5.5e-117 424.9 296 71.6
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 9.3e-117 424.1 361 62.3
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 1.6e-116 423.3 353 63.5
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.1e-116 422.9 298 72.1
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 2.7e-116 422.5 310 69.0
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 4.6e-116 421.8 310 69.0
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 4.6e-116 421.8 297 72.4
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.0e-115 420.6 303 70.3
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.8e-115 419.9 302 68.9
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 2.3e-115 419.5 310 68.4
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 3.0e-115 419.1 336 64.9
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.9e-114 416.4 303 70.0
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 5.3e-112 408.3 306 64.4
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 1.2e-111 407.1 301 65.4
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.9e-110 402.5 298 69.8
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.9e-109 399.8 307 63.8
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 3.2e-109 399.1 302 66.9
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 1.2e-108 397.1 307 63.5
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 2.1e-108 396.4 307 64.2
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 3.6e-108 395.6 281 71.2
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 7.9e-108 394.4 306 63.7
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 7.9e-108 394.4 298 66.4
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 1.0e-107 394.0 319 62.7
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.4e-107 393.7 297 64.6
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 1.4e-107 393.7 297 64.6
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 3.0e-107 392.5 295 65.4
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 3.0e-107 392.5 292 67.8
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 3.9e-107 392.1 302 63.2
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 6.7e-107 391.3 300 65.3
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 1.1e-106 390.6 296 64.2
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 1.1e-106 390.6 303 62.7
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 7.4e-106 387.9 289 65.7
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 1.3e-105 387.1 303 63.4
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.3e-105 387.1 302 66.6
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 4.8e-105 385.2 285 66.0
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.1e-104 384.0 298 64.8
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 1.5e-103 380.2 295 63.4
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 2.0e-103 379.8 309 61.2
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 4.5e-103 378.6 303 63.0
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-102 377.1 302 61.6
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.3e-102 377.1 302 61.9
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.3e-102 377.1 302 61.6
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 2.2e-102 376.3 302 61.9
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 2.9e-102 375.9 302 61.6
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 3.8e-102 375.6 301 64.5
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 5.0e-102 375.2 303 62.0
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 1.9e-101 373.2 297 63.6
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 3.2e-101 372.5 303 61.1
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 5.5e-101 371.7 303 59.1
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 5.5e-101 371.7 318 62.3
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.2e-100 370.5 319 57.7
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 1.6e-100 370.2 308 59.1
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 6.1e-100 368.2 297 62.3
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 6.7e-99 364.8 302 60.3
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 8.8e-99 364.4 276 64.5
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.1e-98 364.0 313 57.2
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 1.5e-98 363.6 302 59.9
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 3.3e-98 362.5 302 59.6
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 3.3e-98 362.5 302 59.6
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 4.4e-98 362.1 302 59.3
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.0e-91 340.9 255 65.9
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.0e-91 340.9 255 65.9
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.7e-91 338.2 243 72.0
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 2.6e-82 309.7 234 67.9
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 5.7e-82 308.5 301 55.1
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 8.0e-76 288.1 243 59.7
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 5.9e-71 271.9 253 53.8
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 3.0e-67 259.6 215 62.8
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.2e-65 253.4 205 63.4
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 3.7e-65 252.7 182 67.0
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 3.7e-65 252.7 184 68.5
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 1.7e-49 200.7 296 42.2
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 4.1e-48 196.1 302 38.7
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.7e-41 174.1 114 71.1
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 4.8e-28 129.4 93 63.4
Glyma.16G096400 Glycine max HOM05D001723 ORTHO05D001706 1.2e-07 61.6 37 81.1


User provided reference genes

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