Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 8.7e-99 363.6 181 100.0
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 9.4e-77 290.4 186 80.1
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 1.5e-71 273.1 166 83.7
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 4.2e-69 265.0 181 75.1
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 1.0e-67 260.4 186 74.7
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 1.3e-65 253.4 182 73.6
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 3.7e-65 251.9 182 73.6
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 1.8e-64 249.6 185 71.9
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 2.0e-63 246.1 162 74.7
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 6.5e-62 241.1 192 65.1
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 7.2e-61 237.7 179 68.7
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 2.1e-60 236.1 186 67.7
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 6.1e-60 234.6 188 64.9
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 5.2e-59 231.5 182 66.5
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 8.8e-59 230.7 190 64.7
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 8.8e-59 230.7 166 68.7
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 1.2e-58 230.3 186 65.6
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 1.5e-58 229.9 179 63.7
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 2.0e-58 229.6 164 69.5
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 4.4e-58 228.4 194 64.4
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 5.7e-58 228.0 186 63.4
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 5.7e-58 228.0 183 64.5
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 7.5e-58 227.6 188 62.8
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.7e-57 226.5 192 60.4
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 2.2e-57 226.1 160 70.0
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 4.8e-57 224.9 188 63.8
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 6.3e-57 224.6 187 63.1
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 8.3e-57 224.2 194 63.4
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.4e-56 223.4 188 64.9
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 1.4e-56 223.4 148 76.4
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.4e-56 223.4 160 69.4
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 3.1e-56 222.2 160 70.6
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 7.0e-56 221.1 183 60.1
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 9.1e-56 220.7 178 58.4
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.6e-55 219.9 192 64.1
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 5.9e-55 218.0 168 65.5
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 3.8e-54 215.3 183 61.2
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 1.1e-53 213.8 184 63.0
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 1.1e-53 213.8 184 63.0
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 5.5e-53 211.5 168 66.1
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.6e-52 209.9 183 62.8
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 2.1e-52 209.5 194 58.2
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 2.7e-52 209.1 184 60.3
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 3.6e-52 208.8 170 64.7
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 5.2e-51 204.9 180 59.4
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 6.8e-51 204.5 170 58.2
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 8.8e-51 204.1 157 63.7
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 1.5e-50 203.4 171 60.8
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 2.6e-50 202.6 178 60.7
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 3.4e-50 202.2 189 57.1
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 4.4e-50 201.8 151 68.9
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 7.5e-50 201.1 194 55.7
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 7.5e-50 201.1 188 58.0
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 9.8e-50 200.7 220 53.2
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 2.2e-49 199.5 223 49.8
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 1.2e-47 193.7 201 55.2
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 5.9e-47 191.4 155 61.3
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 5.9e-47 191.4 188 56.4
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 5.9e-47 191.4 181 55.8
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 7.7e-47 191.0 191 55.5
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 3.8e-46 188.7 143 62.2
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 8.6e-46 187.6 161 57.8
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 1.1e-45 187.2 140 62.9
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.5e-45 186.8 216 50.9
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 1.9e-45 186.4 189 56.6
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 4.2e-45 185.3 188 55.3
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 6.1e-44 181.4 199 52.8
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 8.0e-44 181.0 202 52.0
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 2.3e-43 179.5 175 57.1
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 3.0e-43 179.1 193 53.9
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 3.0e-43 179.1 159 58.5
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 6.8e-43 177.9 163 57.7
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 8.9e-43 177.6 144 59.0
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 1.5e-42 176.8 188 53.7
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 6.3e-41 171.4 198 52.0
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 3.1e-40 169.1 188 52.1
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 3.1e-40 169.1 189 52.9
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 3.1e-40 169.1 189 52.9
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 1.2e-39 167.2 187 55.1
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 1.6e-39 166.8 193 51.8
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 2.0e-39 166.4 194 52.1
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 2.7e-39 166.0 139 58.3
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 5.9e-39 164.9 141 57.4
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.1e-37 160.6 190 49.5
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 1.5e-37 160.2 109 71.6
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.9e-37 159.8 106 75.5
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 2.1e-36 156.4 107 68.2
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 3.1e-35 152.5 130 62.3
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 3.4e-34 149.1 134 61.9
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 8.3e-33 144.4 117 59.0
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 4.0e-27 125.6 87 69.0
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 2.2e-25 119.8 96 64.6
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 2.4e-24 116.3 76 73.7
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 5.4e-24 115.2 89 66.3
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 7.0e-24 114.8 138 46.4
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 2.1e-23 113.2 72 79.2
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 6.0e-23 111.7 85 65.9
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.0e-22 110.9 92 63.0
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 2.3e-22 109.8 106 52.8
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.5e-21 106.3 100 56.0
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 6.2e-20 101.7 101 53.5
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 8.1e-20 101.3 106 39.6
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 1.8e-19 100.1 68 72.1
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 8.9e-19 97.8 99 52.5
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 8.9e-19 97.8 99 52.5
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 1.5e-18 97.1 109 39.4
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 1.5e-18 97.1 70 64.3
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 2.0e-18 96.7 105 38.1
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 3.4e-18 95.9 53 81.1
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 2.2e-17 93.2 64 65.6
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 2.2e-17 93.2 64 65.6
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 1.0e-14 84.3 160 33.8
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 6.6e-14 81.6 51 68.6
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 6.6e-14 81.6 116 32.8
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 2.5e-13 79.7 92 48.9
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 3.3e-13 79.3 52 76.9
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 4.3e-13 79.0 52 76.9
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 7.3e-13 78.2 51 76.5
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 2.7e-07 59.7 50 62.0
arahy.Tifrunner.gnm1.ann1.02S1KF Arachis hypogaea HOM05D003716 ORTHO05D010944 3.0e-06 56.2 32 81.2
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 8.7e-06 54.7 105 31.4


User provided reference genes

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