Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 0.0e+00 1412.5 703 100.0
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 0.0e+00 1302.0 702 91.0
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 0.0e+00 1281.9 731 87.4
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 0.0e+00 1272.3 710 89.4
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 0.0e+00 1260.7 702 88.3
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 0.0e+00 1247.3 703 87.3
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 0.0e+00 1232.2 702 86.0
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 0.0e+00 1218.8 702 84.6
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 0.0e+00 1184.5 705 82.8
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 0.0e+00 1162.1 705 82.8
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 0.0e+00 1152.1 705 81.3
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 4.5e-292 1007.7 708 69.5
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 7.6e-292 1006.9 679 72.9
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 1.3e-291 1006.1 708 68.8
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 4.9e-291 1004.2 707 69.9
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 9.3e-290 1000.0 710 68.7
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 8.7e-288 993.4 711 68.4
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 4.3e-287 991.1 683 71.3
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 1.8e-285 985.7 710 68.6
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 5.8e-284 980.7 709 67.8
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 5.0e-283 977.6 734 66.3
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 1.2e-281 973.0 707 66.9
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 3.9e-280 968.0 700 68.1
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 1.6e-278 962.6 681 69.6
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 6.3e-278 960.7 706 67.0
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 3.1e-277 958.4 703 66.3
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 6.9e-277 957.2 706 67.0
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 1.5e-276 956.1 673 68.9
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 3.4e-276 954.9 698 67.0
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 4.5e-276 954.5 708 66.4
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 7.7e-276 953.7 750 64.4
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 1.3e-275 953.0 772 62.3
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 5.5e-274 947.6 703 65.7
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 3.6e-273 944.9 702 65.5
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 1.0e-272 943.3 713 65.9
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 3.0e-272 941.8 707 65.9
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 3.9e-272 941.4 715 65.7
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 8.2e-270 933.7 701 65.2
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 2.0e-268 929.1 708 65.4
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 2.6e-268 928.7 713 64.0
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 2.6e-268 928.7 719 64.7
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 3.4e-268 928.3 704 63.9
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 3.8e-267 924.9 665 67.5
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 1.9e-266 922.5 717 64.0
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 9.4e-266 920.2 677 66.0
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 2.1e-265 919.1 706 63.6
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 2.7e-265 918.7 706 62.3
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 1.8e-264 916.0 709 65.0
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 2.3e-264 915.6 707 62.2
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 3.9e-264 914.8 708 62.3
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 8.8e-264 913.7 710 62.4
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 8.8e-264 913.7 707 62.5
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 1.1e-263 913.3 707 64.4
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.5e-263 912.9 693 63.1
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 2.6e-263 912.1 707 62.4
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 1.7e-262 909.4 707 62.2
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 2.2e-262 909.1 680 65.7
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 3.7e-262 908.3 707 62.0
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 3.7e-262 908.3 707 62.1
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 3.7e-262 908.3 706 63.5
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 6.3e-262 907.5 707 62.0
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 5.3e-261 904.4 675 66.2
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 1.2e-260 903.3 707 61.7
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 2.0e-260 902.5 707 61.5
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 4.5e-260 901.4 652 67.5
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.2e-259 899.0 679 65.7
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 2.2e-259 899.0 707 61.1
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 2.5e-258 895.6 723 61.7
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.6e-257 892.9 723 61.5
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 3.3e-255 885.2 749 60.3
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 1.3e-254 883.2 706 60.8
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 4.1e-253 878.2 708 62.6
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 9.1e-253 877.1 612 69.9
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 8.0e-249 864.0 647 65.2
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 1.8e-248 862.8 727 60.1
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 1.4e-245 853.2 712 59.6
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.2e-243 845.9 679 62.3
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 1.5e-239 833.2 663 60.6
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 2.0e-239 832.8 677 60.4
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 2.6e-239 832.4 678 61.2
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 5.9e-236 821.2 753 56.7
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 4.2e-234 815.1 697 59.1
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 1.8e-229 799.7 704 58.2
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 7.8e-228 794.3 566 67.0
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 2.9e-227 792.3 1000 45.5
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 9.8e-223 777.3 613 63.5
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 1.3e-219 766.9 524 71.0
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 2.5e-218 762.7 497 74.6
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 9.5e-218 760.8 428 86.9
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 6.8e-216 754.6 629 60.4
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 1.1e-213 747.3 707 55.3
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 3.0e-211 739.2 569 64.0
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 1.6e-209 733.4 677 54.1
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 9.9e-207 724.2 512 68.8
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 2.5e-194 682.9 669 53.5
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 4.9e-190 668.7 577 57.7
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 8.7e-187 657.9 637 53.4
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 5.6e-178 628.6 652 49.4
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 1.9e-173 613.6 383 80.9
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 1.6e-172 610.5 686 46.2
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 2.9e-166 589.7 325 90.5
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 1.4e-149 534.3 352 73.3
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 1.9e-149 533.9 421 60.1
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 2.0e-138 497.3 390 62.3
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 8.3e-129 465.3 518 45.6
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 2.4e-120 437.2 393 57.5
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 5.2e-115 419.5 436 47.7
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 2.5e-101 374.0 311 60.1
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 8.9e-99 365.5 276 64.1
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 1.1e-96 358.6 761 35.0
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 7.8e-95 352.4 279 63.1
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 3.0e-94 350.5 274 65.7
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 3.3e-93 347.1 354 50.8
PGSC0003DMG400021087 Solanum tuberosum HOM05D005075 ORTHO05D007097 1.7e-81 308.1 237 61.2
Haze_02705 Corylus avellana HOM05D005075 ORTHO05D007097 8.4e-81 305.8 233 66.5
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.2e-71 275.4 282 51.8
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 7.9e-71 272.7 390 39.5
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 2.1e-68 264.6 663 30.9
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 3.5e-63 247.3 426 35.4
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 3.8e-57 227.3 580 28.6
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 7.7e-42 176.4 353 36.5
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 7.2e-40 169.9 281 34.9
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 1.6e-39 168.7 123 66.7
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 4.4e-37 160.6 213 44.1
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 3.7e-36 157.5 137 59.9
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 1.4e-35 155.6 221 42.1
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 3.1e-35 154.5 117 68.4
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 7.7e-34 149.8 218 42.2
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 1.4e-32 145.6 103 68.0
Actinidia30670 Actinidia chinensis HOM05D005075 ORTHO05D007097 1.0e-22 112.8 121 52.9
AagrBONN_evm.TU.Sc2ySwM_228.4177 Anthoceros agrestis HOM05D005075 ORTHO05D007097 1.5e-21 109.0 84 60.7
Atru.chr11.2251 Acer truncatum HOM05D005075 ORTHO05D007097 2.0e-18 98.6 83 51.8
COL.COLO4_15613 Corchorus olitorius HOM05D005075 ORTHO05D162910 1.7e-17 95.5 424 22.6
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 5.0e-17 94.0 112 42.0
MD16G1112400 Malus domestica HOM05D005075 ORTHO05D007097 1.6e-15 89.0 159 41.5
MBI13_g10206_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.0e-14 84.7 46 76.1
MBI16_g25874_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 5.2e-14 84.0 64 59.4
MBI18_g33166_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 8.8e-14 83.2 53 64.2
MBI18_g47010_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.2e-13 82.8 46 73.9
Cfa025560 Carpinus fangiana HOM05D005075 ORTHO05D122628 7.5e-13 80.1 385 22.9
MBI18_g06981_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.3e-12 79.3 46 71.7
HPP92_001243 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.3e-12 79.3 88 44.3
MBI18_g03943_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.8e-12 78.2 50 66.0
Cfa026189 Carpinus fangiana HOM05D002287 ORTHO05D123242 3.1e-11 74.7 58 55.2
MD16G1112100 Malus domestica HOM05D005075 ORTHO05D037935 2.7e-10 71.6 50 74.0
Atru.chr11.2270 Acer truncatum HOM05D005075 ORTHO05D037935 2.8e-07 61.6 47 68.1
Pp3s34_300 Physcomitrium patens HOM05D000549 ORTHO05D006202 6.1e-07 60.5 168 29.2
Sabra10G0048500 Salix brachista HOM05D005075 ORTHO05D007097 1.0e-06 59.7 42 61.9


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