Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 1.1e-96 356.7 182 100.0
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 2.9e-86 322.0 182 87.4
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 5.0e-86 321.2 182 87.4
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 7.5e-82 307.4 188 86.2
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 2.9e-70 268.9 182 76.4
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 1.1e-69 266.9 182 76.9
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 2.5e-69 265.8 182 76.4
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.2e-68 263.5 182 75.8
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 4.4e-66 255.0 188 73.9
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 6.3e-65 251.1 184 72.8
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 6.3e-65 251.1 184 72.8
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 2.3e-62 242.7 187 66.3
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 2.3e-62 242.7 187 69.5
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 9.5e-61 237.3 190 65.8
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 2.3e-59 232.6 194 64.9
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 2.3e-59 232.6 192 65.1
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 5.2e-59 231.5 188 64.4
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 1.2e-58 230.3 191 64.9
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 1.5e-58 229.9 194 64.9
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 1.5e-58 229.9 194 64.9
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 2.0e-58 229.6 199 63.3
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 3.4e-58 228.8 205 60.0
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 7.5e-58 227.6 194 66.5
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 9.8e-58 227.3 198 64.1
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 2.9e-57 225.7 198 62.1
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 2.9e-57 225.7 196 62.8
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.9e-57 225.7 192 62.5
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 4.9e-57 224.9 192 62.5
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 8.3e-57 224.2 188 63.8
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.4e-56 223.4 194 64.4
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 1.4e-56 223.4 189 65.1
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.2e-56 222.2 198 64.6
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 5.4e-56 221.5 193 62.7
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 9.2e-56 220.7 191 62.8
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 9.2e-56 220.7 191 64.4
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.2e-55 220.3 198 64.1
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 1.2e-55 220.3 191 62.3
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 1.2e-55 220.3 206 59.2
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 1.2e-55 220.3 186 63.4
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.0e-55 219.5 198 64.6
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 3.5e-55 218.8 186 63.4
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 5.9e-55 218.0 148 75.0
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 1.3e-54 216.9 147 73.5
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.0e-54 215.7 190 61.6
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 3.9e-54 215.3 180 64.4
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 5.0e-54 214.9 141 78.7
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 1.1e-53 213.8 200 59.5
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 1.1e-53 213.8 147 74.1
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.5e-53 213.4 194 59.8
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 2.5e-53 212.6 199 60.8
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 3.3e-53 212.2 148 73.0
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 4.3e-53 211.8 184 62.5
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 4.3e-53 211.8 200 61.5
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 4.3e-53 211.8 201 60.2
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 5.6e-53 211.5 239 52.7
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 7.3e-53 211.1 130 83.1
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 7.3e-53 211.1 184 62.5
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 9.5e-53 210.7 182 62.1
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 1.2e-52 210.3 204 58.8
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 1.6e-52 209.9 189 63.0
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.6e-52 209.9 189 63.5
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.6e-52 209.9 194 59.8
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 1.6e-52 209.9 193 60.1
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.8e-52 209.1 184 62.5
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 3.6e-52 208.8 182 62.6
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 3.6e-52 208.8 140 74.3
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 3.6e-52 208.8 142 73.2
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.6e-52 208.8 184 62.0
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 8.0e-52 207.6 156 71.8
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 1.0e-51 207.2 197 60.9
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 1.0e-51 207.2 184 62.0
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 1.0e-51 207.2 199 57.8
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.0e-51 207.2 192 58.3
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 2.3e-51 206.1 132 78.8
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 2.3e-51 206.1 155 69.0
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 3.1e-51 205.7 129 80.6
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 6.8e-51 204.5 195 58.5
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 6.8e-51 204.5 216 54.2
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 6.8e-51 204.5 112 89.3
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 1.5e-50 203.4 187 60.4
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 2.0e-50 203.0 196 54.6
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 7.5e-50 201.1 205 57.1
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 9.8e-50 200.7 190 57.4
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 4.9e-49 198.4 140 73.6
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 4.9e-49 198.4 131 78.6
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 1.4e-48 196.8 187 60.4
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.4e-48 196.8 190 53.2
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 3.2e-48 195.7 188 56.9
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 5.4e-48 194.9 128 74.2
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 9.2e-48 194.1 130 75.4
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.2e-47 193.7 128 74.2
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 1.6e-47 193.4 128 73.4
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 1.6e-47 193.4 159 62.9
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 4.6e-47 191.8 128 72.7
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 6.0e-47 191.4 193 55.4
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 7.8e-47 191.0 128 72.7
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 1.0e-46 190.7 128 72.7
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 1.3e-46 190.3 128 73.4
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.3e-46 189.5 111 83.8
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 3.9e-46 188.7 119 75.6
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 3.9e-46 188.7 128 71.9
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 5.0e-46 188.3 170 61.8
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 6.6e-46 188.0 175 60.0
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 8.6e-46 187.6 188 54.8
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 1.1e-45 187.2 128 71.9
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.1e-45 187.2 128 71.9
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.5e-45 186.8 128 71.9
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 1.5e-45 186.8 128 70.3
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 1.5e-45 186.8 128 70.3
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 1.5e-45 186.8 128 71.9
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 1.5e-45 186.8 128 70.3
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 2.5e-45 186.0 170 60.0
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 5.6e-45 184.9 116 75.9
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 1.2e-44 183.7 112 77.7
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 2.1e-44 183.0 112 79.5
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 6.2e-44 181.4 203 53.7
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 1.8e-43 179.9 185 57.3
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 4.4e-42 175.3 130 65.4
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 9.8e-42 174.1 191 47.6
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 9.8e-42 174.1 112 74.1
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 2.9e-41 172.6 101 85.1
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 2.9e-41 172.6 129 66.7
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 3.7e-41 172.2 126 70.6
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 2.4e-40 169.5 269 42.8
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 3.2e-40 169.1 165 59.4
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 7.1e-40 167.9 157 60.5
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 9.2e-40 167.5 150 57.3
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 6.0e-39 164.9 103 78.6
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 7.8e-39 164.5 117 71.8
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 6.6e-38 161.4 104 77.9
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 6.6e-38 161.4 167 56.3
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.9e-37 159.8 103 78.6
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 2.3e-35 152.9 193 48.2
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 3.2e-32 142.5 115 62.6
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 7.1e-32 141.4 111 64.9
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 7.1e-32 141.4 115 60.9
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.6e-31 140.2 112 64.3
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.6e-31 140.2 115 64.3
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 7.8e-31 137.9 99 69.7
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 1.5e-29 133.7 126 58.7
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 1.9e-29 133.3 126 60.3
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.9e-29 133.3 118 59.3
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 7.3e-29 131.3 114 55.3
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 3.3e-21 105.9 87 64.4
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.3e-20 104.0 91 57.1
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 4.9e-17 92.0 119 42.0
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.8e-12 76.3 111 39.6
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 5.3e-11 72.0 87 37.9
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 1.5e-10 70.5 42 83.3
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 2.6e-10 69.7 49 69.4
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.6e-10 69.7 69 53.6
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 3.5e-07 59.3 35 80.0
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 4.6e-07 58.9 39 61.5


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