Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 8.8e-146 520.4 286 100.0
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 9.1e-135 483.8 286 93.0
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 4.2e-132 474.9 285 91.6
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 2.7e-131 472.2 286 90.6
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 3.6e-131 471.9 286 91.3
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 6.1e-131 471.1 286 90.6
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 8.0e-131 470.7 285 90.9
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 2.6e-129 465.7 285 89.8
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 4.9e-128 461.5 285 89.8
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 9.2e-127 457.2 296 86.5
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 3.8e-125 451.8 286 85.3
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.1e-124 450.3 287 88.5
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 4.3e-124 448.4 285 85.6
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 5.2e-122 441.4 285 84.6
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 6.8e-122 441.0 285 85.6
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 1.2e-121 440.3 285 86.3
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 4.4e-121 438.3 286 83.6
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 4.4e-121 438.3 286 83.6
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 1.3e-120 436.8 286 83.6
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 2.2e-120 436.0 240 84.2
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.2e-120 436.0 286 82.5
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 2.9e-120 435.6 285 82.8
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 3.7e-120 435.3 286 83.6
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 1.8e-119 433.0 286 82.5
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 2.4e-119 432.6 288 82.3
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 2.4e-119 432.6 286 85.0
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 3.2e-119 432.2 286 81.8
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 4.1e-119 431.8 286 82.5
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 7.0e-119 431.0 286 84.6
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.6e-118 429.9 285 81.4
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 4.6e-118 428.3 286 81.1
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 5.9e-118 427.9 285 81.1
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 5.9e-118 427.9 285 80.4
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 1.0e-117 427.2 285 81.4
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.7e-117 426.4 286 81.5
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 3.0e-117 425.6 285 82.8
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.0e-117 425.6 285 80.0
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 5.0e-117 424.9 306 79.1
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 5.0e-117 424.9 285 81.4
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.5e-116 423.3 286 82.9
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 1.5e-116 423.3 288 81.9
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 7.3e-116 421.0 286 81.8
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 6.2e-115 417.9 287 81.9
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 6.2e-115 417.9 289 82.7
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 1.2e-113 413.7 287 80.8
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 2.0e-113 412.9 286 81.8
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 4.4e-113 411.8 286 81.5
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 1.9e-111 406.4 285 81.1
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 2.4e-111 406.0 286 79.4
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.2e-111 405.6 286 78.3
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 4.1e-111 405.2 285 80.4
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 7.0e-111 404.4 286 78.7
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 6.0e-110 401.4 283 78.4
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 1.3e-109 400.2 267 82.8
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 1.7e-109 399.8 286 81.1
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 7.3e-108 394.4 242 77.3
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 9.5e-108 394.0 285 77.9
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 2.8e-107 392.5 240 75.8
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 1.4e-106 390.2 240 77.5
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 1.8e-106 389.8 288 78.1
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 6.8e-106 387.9 285 76.8
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 4.4e-105 385.2 246 74.8
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 1.7e-104 383.3 246 74.4
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 2.2e-104 382.9 285 77.2
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 3.7e-104 382.1 288 75.0
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.1e-103 380.6 231 77.5
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 1.1e-103 380.6 286 75.9
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.9e-103 379.8 289 75.4
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 1.9e-103 379.8 286 75.9
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 4.1e-103 378.6 289 75.4
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 7.1e-103 377.9 284 76.1
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 9.2e-103 377.5 289 74.4
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.1e-102 376.3 286 75.2
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 3.0e-101 372.5 245 72.7
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 6.6e-101 371.3 286 73.4
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.1e-100 370.5 275 66.9
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 1.1e-100 370.5 243 72.0
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.1e-100 370.5 288 70.8
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 1.5e-100 370.2 285 75.1
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 3.3e-100 369.0 210 82.9
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 7.3e-100 367.9 289 72.3
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 9.5e-100 367.5 287 72.8
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 3.6e-99 365.5 244 71.7
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 8.1e-99 364.4 286 71.3
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 1.1e-98 364.0 244 71.7
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 1.4e-98 363.6 245 72.2
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 2.3e-98 362.8 242 73.1
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 5.2e-98 361.7 342 64.0
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 2.6e-97 359.4 262 69.1
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 5.8e-97 358.2 285 72.3
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.3e-96 357.1 287 71.8
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 1.7e-96 356.7 241 71.0
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 4.1e-95 352.1 234 69.2
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 7.1e-95 351.3 287 69.7
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 1.2e-94 350.5 286 72.4
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 4.6e-94 348.6 243 70.8
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 6.0e-94 348.2 286 70.6
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 2.5e-92 342.8 210 74.3
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 7.3e-92 341.3 246 68.7
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.1e-91 339.7 285 71.6
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 2.8e-91 339.3 222 69.8
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 3.1e-90 335.9 239 67.4
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 3.1e-90 335.9 221 70.6
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 6.8e-90 334.7 243 79.4
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 2.2e-88 329.7 287 66.9
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 3.2e-87 325.9 294 68.7
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 6.0e-86 321.6 294 68.0
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 6.0e-86 321.6 231 80.5
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 2.3e-85 319.7 297 67.7
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 3.0e-85 319.3 295 67.8
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 9.6e-84 314.3 285 67.4
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 2.1e-83 313.2 250 66.4
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 1.1e-82 310.8 293 66.9
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 2.4e-82 309.7 249 64.3
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 5.3e-82 308.5 289 67.8
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 6.9e-82 308.1 240 64.6
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 2.0e-81 306.6 240 63.3
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 9.9e-81 304.3 245 64.1
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 9.9e-81 304.3 247 64.4
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.9e-79 300.1 229 75.5
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 7.1e-79 298.1 198 73.2
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 1.7e-77 293.5 232 63.4
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 5.6e-76 288.5 197 69.0
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 2.1e-75 286.6 244 59.8
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 3.8e-72 275.8 239 61.5
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 1.9e-71 273.5 229 71.2
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 6.7e-69 265.0 217 61.3
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 3.3e-68 262.7 244 56.1
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 4.5e-65 252.3 200 62.5
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 4.2e-63 245.7 246 53.7
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 2.1e-62 243.4 245 55.1
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 1.8e-45 187.2 245 58.4
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 1.1e-44 184.5 162 53.7
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 2.4e-42 176.8 127 66.9
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.2e-33 147.9 251 37.8
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 7.7e-33 145.2 239 38.5
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 1.3e-32 144.4 245 38.4
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 2.1e-30 137.1 188 47.3
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 2.7e-30 136.7 227 39.2
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 6.1e-30 135.6 236 37.7
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 8.0e-30 135.2 232 39.7
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 8.8e-29 131.7 251 34.7
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 3.3e-28 129.8 228 37.3
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 7.5e-28 128.6 234 38.5
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.7e-27 126.3 228 38.2
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 4.8e-27 125.9 239 36.8
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 4.8e-27 125.9 233 37.3
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.4e-26 124.4 240 34.6
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 4.1e-26 122.9 229 37.1
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 9.1e-26 121.7 248 34.3
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 9.1e-26 121.7 232 36.6
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.2e-25 121.3 258 33.7
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 2.7e-25 120.2 229 36.2
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 2.9e-24 116.7 237 35.4
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 7.2e-23 112.1 53 96.2
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 4.7e-22 109.4 209 35.4
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 4.0e-21 106.3 252 34.1
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 3.1e-18 96.7 205 35.6
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 7.0e-18 95.5 245 32.2
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.6e-17 94.4 249 32.5
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 2.0e-17 94.0 175 38.3
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 1.7e-16 90.9 56 73.2
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 2.2e-16 90.5 171 38.0
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 5.0e-16 89.4 161 37.9
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 5.5e-15 85.9 46 82.6
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 1.2e-14 84.7 203 31.5
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 1.2e-14 84.7 54 70.4
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 1.6e-14 84.3 256 28.1
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.3e-11 74.7 103 41.7
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 2.2e-11 73.9 188 32.4
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 1.2e-09 68.2 51 56.9
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 5.9e-09 65.9 51 52.9
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 6.6e-08 62.4 165 30.9
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.5e-07 61.2 30 76.7
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 1.6e-06 57.8 56 46.4


User provided reference genes

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