Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16430_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 0.0e+00 1384.0 697 100.0
Lj6g0025267 Lotus japonicus HOM05D005839 ORTHO05D005686 3.6e-108 396.7 828 37.8
Glyma.08G107100 Glycine max HOM05D005839 ORTHO05D005686 1.6e-103 381.3 1062 32.3
Glyma.05G150200 Glycine max HOM05D005839 ORTHO05D005686 1.3e-94 351.7 1107 30.6
arahy.Tifrunner.gnm1.ann1.H8QNW8 Arachis hypogaea HOM05D005839 ORTHO05D005686 3.8e-86 323.6 923 33.4
arahy.Tifrunner.gnm1.ann1.62570H Arachis hypogaea HOM05D005839 ORTHO05D005686 1.2e-82 312.0 923 32.8
Lj4g0005413 Lotus japonicus HOM05D005839 ORTHO05D005686 1.8e-80 304.7 1128 28.8
Phvul.003G048600 Phaseolus vulgaris HOM05D005839 ORTHO05D005686 2.8e-76 290.8 1144 29.0
VMungo0251G1575 Vigna mungo HOM05D005839 ORTHO05D005686 4.7e-76 290.0 1108 28.7
Glyma.18G003300 Glycine max HOM05D005839 ORTHO05D005686 5.2e-75 286.6 877 32.2
arahy.Tifrunner.gnm1.ann1.3YD71H Arachis hypogaea HOM05D005839 ORTHO05D005686 1.6e-71 275.0 1128 27.9
arahy.Tifrunner.gnm1.ann1.SAUI5N Arachis hypogaea HOM05D005839 ORTHO05D005686 1.7e-70 271.6 1140 27.3
Lalb_Chr12g0205781 Lupinus albus HOM05D005839 ORTHO05D005686 8.6e-70 269.2 728 34.3
Ca_18007_v3 Cicer arietinum L. HOM05D005839 ORTHO05D005686 1.5e-66 258.5 967 29.2
Medtr8g081010 Medicago truncatula HOM05D005839 ORTHO05D005686 3.7e-65 253.8 993 28.7
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 1.5e-50 205.3 1004 26.4
Psat7g076360 Pisum sativum HOM05D005839 ORTHO05D005686 1.3e-44 185.7 721 29.5
Glyma.11G253800 Glycine max HOM05D005839 ORTHO05D005686 8.1e-44 183.0 702 30.1
Actinidia28516 Actinidia chinensis HOM05D005839 ORTHO05D005686 1.5e-34 152.1 959 24.3
MD04G1021500 Malus domestica HOM05D005839 ORTHO05D005686 3.2e-32 144.4 1024 23.6
Gohir.A09G207800 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.8e-30 138.7 880 23.3
CiPaw.01G113800 Carya illinoinensis HOM05D005839 ORTHO05D005686 1.4e-27 129.0 147 51.0
Gohir.D09G201300 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.8e-27 128.6 893 24.6
Ciclev10004236m.g Citrus clementina HOM05D005839 ORTHO05D005686 3.1e-27 127.9 251 37.8
GSVIVG01031570001 Vitis vinifera HOM05D005839 ORTHO05D005686 3.1e-27 127.9 132 47.7
Migut.G00951 Erythranthe guttata HOM05D005839 ORTHO05D005686 5.3e-27 127.1 708 24.4
Dinv32166 Davidia involucrata HOM05D005839 ORTHO05D005686 1.2e-26 125.9 249 37.8
Gorai.006G225000 Gossypium raimondii HOM05D005839 ORTHO05D005686 1.2e-26 125.9 924 23.7
Haze_11680 Corylus avellana HOM05D005839 ORTHO05D005686 1.5e-26 125.6 488 30.1
Nitab4.5_0000037g0160 Nicotiana tabacum HOM05D005839 ORTHO05D005686 2.0e-26 125.2 954 24.1
Potri.014G146200 Populus trichocarpa HOM05D005839 ORTHO05D005686 2.6e-26 124.8 148 48.0
QL06p027171 Quercus lobata HOM05D005839 ORTHO05D005686 4.5e-26 124.0 276 34.8
TWI53G2144 Tripterygium wilfordii HOM05D005839 ORTHO05D005686 1.3e-25 122.5 976 23.1
Oeu049072.1 Olea europaea HOM05D005839 ORTHO05D005686 2.9e-25 121.3 932 23.6
arahy.Tifrunner.gnm1.ann1.52QBHW Arachis hypogaea HOM05D005839 ORTHO05D005686 4.9e-25 120.6 154 46.8
Actinidia35832 Actinidia chinensis HOM05D005839 ORTHO05D005686 8.4e-25 119.8 140 50.0
Atru.chr3.1776 Acer truncatum HOM05D005839 ORTHO05D005686 1.1e-24 119.4 134 47.8
MSTRG.9771 Avicennia marina HOM05D005839 ORTHO05D005686 1.9e-24 118.6 823 24.7
MSTRG.4261 Avicennia marina HOM05D005839 ORTHO05D005686 2.5e-24 118.2 281 31.7
Duzib151G0492 Durio zibethinus HOM05D005839 ORTHO05D005686 4.2e-24 117.5 133 49.6
Prupe.1G170500 Prunus persica HOM05D005839 ORTHO05D005686 7.1e-24 116.7 238 36.6
Solyc09g092550.4 Solanum lycopersicum HOM05D005839 ORTHO05D005686 9.3e-24 116.3 134 46.3
Manes.05G199100 Manihot esculenta HOM05D005839 ORTHO05D005686 1.2e-23 115.9 126 51.6
Gohir.D10G136100 Gossypium hirsutum HOM05D005839 ORTHO05D005686 2.1e-23 115.2 880 23.4
CSS0003065 Camellia sinensis var. sinensis HOM05D005839 ORTHO05D005686 2.7e-23 114.8 358 31.3
arahy.Tifrunner.gnm1.ann1.SDG4EV Arachis hypogaea HOM05D005839 ORTHO05D005686 4.6e-23 114.0 256 34.4
FAN12G3285 Fragaria x ananassa HOM05D005839 ORTHO05D005686 4.6e-23 114.0 138 47.8
Cc03_g09160 Coffea canephora HOM05D005839 ORTHO05D005686 7.9e-23 113.2 259 34.0
ECA238G4483 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.9e-23 113.2 742 24.0
Sabra02G0179700 Salix brachista HOM05D005839 ORTHO05D005686 7.9e-23 113.2 195 39.0
Sopen09g035450 Solanum pennellii HOM05D005839 ORTHO05D005686 1.0e-22 112.8 134 44.8
Hma1.2p1_0984F.1_g244280 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 1.8e-22 112.1 141 50.4
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 2.3e-22 111.7 239 34.3
Potri.002G235900 Populus trichocarpa HOM05D005839 ORTHO05D005686 2.3e-22 111.7 195 36.9
Sabra14G0109900 Salix brachista HOM05D005839 ORTHO05D005686 2.3e-22 111.7 149 45.0
RcHm_v2.0_Chr4g0412531 Rosa chinensis HOM05D005839 ORTHO05D005686 3.9e-22 110.9 242 33.1
CAN.G1684.4 Capsicum annuum HOM05D005839 ORTHO05D005686 6.7e-22 110.2 256 32.8
PGSC0003DMG401021870 Solanum tuberosum HOM05D005839 ORTHO05D005686 8.7e-22 109.8 123 46.3
Gohir.A10G130200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 1.1e-21 109.4 914 24.0
Lsat_1_v5_gn_6_58881 Lactuca sativa HOM05D005839 ORTHO05D005686 1.5e-21 109.0 205 37.6
Thecc.04G191800 Theobroma cacao HOM05D005839 ORTHO05D005686 1.5e-21 109.0 164 43.3
Thhalv10024466m.g Eutrema salsugineum HOM05D010750 ORTHO05D005686 1.9e-21 108.6 817 25.5
FvH4_4g12870 Fragaria vesca HOM05D005839 ORTHO05D005686 1.9e-21 108.6 239 33.1
Ah.04g149590 Amaranthus hybridus HOM05D005839 ORTHO05D005686 5.7e-21 107.1 152 42.8
Cpa.g.sc157.18 Carica papaya HOM05D005839 ORTHO05D005686 7.4e-21 106.7 143 43.4
Peaxi162Scf00286g00911 Petunia axillaris HOM05D005839 ORTHO05D005686 7.4e-21 106.7 136 41.9
Eucgr.H02631 Eucalyptus grandis HOM05D005839 ORTHO05D005686 1.6e-20 105.5 292 30.1
SalBow2G2330 Salvia bowleyana HOM05D005839 ORTHO05D005686 1.6e-20 105.5 209 32.5
SalBow2G2888 Salvia bowleyana HOM05D005839 ORTHO05D005686 1.6e-20 105.5 209 32.5
Cpa.g.sc157.15 Carica papaya HOM05D005839 ORTHO05D005686 3.7e-20 104.4 143 42.7
Atru.chr3.1775 Acer truncatum HOM05D005839 ORTHO05D005686 4.8e-20 104.0 171 40.9
arahy.Tifrunner.gnm1.ann1.Q2NVSC Arachis hypogaea HOM05D005839 ORTHO05D000011 6.3e-20 103.6 104 50.0
Sed0009973 Sechium edule HOM05D005839 ORTHO05D005686 8.2e-20 103.2 202 36.6
Lsat_1_v5_gn_2_47881 Lactuca sativa HOM05D005839 ORTHO05D005686 1.1e-19 102.8 125 46.4
Duzib151G0277 Durio zibethinus HOM05D005839 ORTHO05D005686 1.4e-19 102.4 242 33.9
EL10Ac3g07436 Beta vulgaris HOM05D005839 ORTHO05D005686 2.4e-19 101.7 414 26.3
HanXRQChr07g0186001 Helianthus annuus HOM05D005839 ORTHO05D005686 2.4e-19 101.7 810 23.1
Hma1.2p1_1457F.1_g284680 Hydrangea macrophylla HOM05D005839 ORTHO05D005686 4.1e-19 100.9 277 32.5
BcaC01g00210 Brassica carinata HOM05D010750 ORTHO05D005686 6.9e-19 100.1 746 25.3
Cpa.g.sc157.17 Carica papaya HOM05D005839 ORTHO05D005686 6.9e-19 100.1 158 43.7
AUR62020882 Chenopodium quinoa HOM05D005839 ORTHO05D005686 6.9e-19 100.1 145 40.7
PGR083G0592 Punica granatum HOM05D005839 ORTHO05D005686 9.0e-19 99.8 116 48.3
TAR636G1565 Trochodendron aralioides HOM05D005839 ORTHO05D005686 9.0e-19 99.8 113 49.6
Hund19024 Selenicereus undatus HOM05D005839 ORTHO05D005686 1.2e-18 99.4 286 32.5
Hund24442 Selenicereus undatus HOM05D005839 ORTHO05D005686 1.2e-18 99.4 130 40.0
Duzib268G0552 Durio zibethinus HOM05D005839 ORTHO05D005686 1.5e-18 99.0 250 32.8
TAR636G0994 Trochodendron aralioides HOM05D005839 ORTHO05D005686 4.5e-18 97.4 224 34.8
ClCG05G007080 Citrullus lanatus HOM05D005839 ORTHO05D005686 5.9e-18 97.1 124 44.4
arahy.Tifrunner.gnm1.ann1.98ICAR Arachis hypogaea HOM05D000340 ORTHO05D000821 1.0e-17 96.3 129 45.7
AUR62018535 Chenopodium quinoa HOM05D005839 ORTHO05D005686 1.3e-17 95.9 121 46.3
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 1.3e-17 95.9 193 39.4
Sp7g12060 Schrenkiella parvula HOM05D010750 ORTHO05D005686 1.3e-17 95.9 840 24.4
CANSAT78G1593 Cannabis sativa HOM05D005839 ORTHO05D005686 1.7e-17 95.5 161 42.2
BolC3t19949H Brassica oleracea HOM05D010750 ORTHO05D005686 2.9e-17 94.7 743 25.7
COL.COLO4_04260 Corchorus olitorius HOM05D005839 ORTHO05D005686 5.0e-17 94.0 253 33.6
ECA233G2442 Erigeron canadensis HOM05D005839 ORTHO05D005686 6.5e-17 93.6 119 46.2
CsaV3_3G015820 Cucumis sativus L. HOM05D005839 ORTHO05D005686 1.1e-16 92.8 128 46.1
DCAR_005282 Daucus carota HOM05D005839 ORTHO05D005686 1.1e-16 92.8 198 35.9
A08p24270 Brassica napus HOM05D010750 ORTHO05D005686 1.9e-16 92.0 783 23.9
C03p76940 Brassica napus HOM05D010750 ORTHO05D005686 1.9e-16 92.0 743 26.1
Lalb_Chr07g0186961 Lupinus albus HOM05D005839 ORTHO05D005686 2.5e-16 91.7 147 38.8
TAR365G0636 Trochodendron aralioides HOM05D005839 ORTHO05D005686 2.5e-16 91.7 218 35.3
CARHR220270 Cardamine hirsuta HOM05D010750 ORTHO05D005686 4.2e-16 90.9 815 23.3
MELO3C006781.2 Cucumis melo HOM05D005839 ORTHO05D005686 4.2e-16 90.9 184 34.8
BraA08t34382Z Brassica rapa HOM05D010750 ORTHO05D005686 7.2e-16 90.1 733 24.0
FAN22G0032 Fragaria x ananassa HOM05D005839 ORTHO05D005686 9.4e-16 89.7 182 37.4
Sed0018641 Sechium edule HOM05D005839 ORTHO05D005686 1.2e-15 89.4 107 43.9
Aa31LG9G3190 Aethionema arabicum HOM05D010750 ORTHO05D005686 1.6e-15 89.0 772 24.1
Gohir.D02G113200 Gossypium hirsutum HOM05D005839 ORTHO05D005686 2.7e-15 88.2 159 40.3
Gorai.011G150900 Gossypium raimondii HOM05D005839 ORTHO05D005686 6.1e-15 87.0 97 45.4
HanXRQChr02g0058441 Helianthus annuus HOM05D005839 ORTHO05D005686 1.0e-14 86.3 90 51.1
A04p07940 Brassica napus HOM05D010750 ORTHO05D005686 1.4e-14 85.9 807 25.0
Gorai.005G128100 Gossypium raimondii HOM05D005839 ORTHO05D005686 2.3e-14 85.1 236 32.6
BcaC02g09348 Brassica carinata HOM05D010750 ORTHO05D005686 3.0e-14 84.7 817 23.5
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 3.0e-14 84.7 224 31.7
ATR1147G004 Amborella trichopoda HOM05D005839 ORTHO05D005686 5.1e-14 84.0 146 39.0
BcaNung05575 Brassica carinata HOM05D010750 ORTHO05D005686 5.1e-14 84.0 106 45.3
arahy.Tifrunner.gnm1.ann1.CIA2YT Arachis hypogaea HOM05D005839 ORTHO05D005686 6.7e-14 83.6 79 51.9
BraA04t16484Z Brassica rapa HOM05D010750 ORTHO05D005686 6.7e-14 83.6 804 25.4
Lj3A356G9 Lonicera japonica HOM05D005839 ORTHO05D005686 6.7e-14 83.6 276 30.4
BolC4t25741H Brassica oleracea HOM05D010750 ORTHO05D005686 8.8e-14 83.2 807 23.2
C04p41620 Brassica napus HOM05D010750 ORTHO05D005686 1.5e-13 82.4 811 22.8
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 1.5e-13 82.4 55 67.3
PGSC0003DMG400021878 Solanum tuberosum HOM05D005839 ORTHO05D005686 2.0e-13 82.0 264 33.3
Carub.0007s2819 Capsella rubella HOM05D010750 ORTHO05D005686 8.2e-12 76.6 820 22.9
ECA233G5455 Erigeron canadensis HOM05D005839 ORTHO05D005686 1.1e-11 76.3 356 29.5
THA.LOC104808672 Tarenaya hassleriana HOM05D010750 ORTHO05D005686 1.1e-11 76.3 869 22.2
AT4G14200 Arabidopsis thaliana HOM05D010750 ORTHO05D005686 1.4e-11 75.9 785 22.4
arahy.Tifrunner.gnm1.ann1.JXU29S Arachis hypogaea HOM05D005839 ORTHO05D005686 4.1e-11 74.3 125 40.8
Lj3A375G30 Lonicera japonica HOM05D005839 ORTHO05D005686 6.9e-11 73.6 261 29.9
Lalb_Chr07g0186981 Lupinus albus HOM05D005839 ORTHO05D005686 1.2e-10 72.8 201 33.3
Nn1g08130 Nelumbo nucifera HOM05D005839 ORTHO05D005686 1.5e-10 72.4 130 33.1
Nn8g41260 Nelumbo nucifera HOM05D005839 ORTHO05D005686 2.2e-09 68.6 267 25.8
SEGI_24376 Sequoiadendron giganteum HOM05D005839 ORTHO05D005686 8.5e-09 66.6 45 62.2
Aqoxy2G04047 Aquilegia oxysepala HOM05D005839 ORTHO05D005686 1.1e-08 66.2 334 25.1
Sc13g0000540 Simmondsia chinensis HOM05D005839 ORTHO05D005686 1.4e-08 65.9 125 40.0
PSO017G5422 Papaver somniferum HOM05D037519 ORTHO05D037279 5.5e-08 63.9 221 28.1
QL06p027203 Quercus lobata HOM05D034196 ORTHO05D005686 5.5e-08 63.9 174 31.0
PSO063G0130 Papaver somniferum HOM05D037519 ORTHO05D037279 2.1e-07 62.0 221 27.1
Mapoly0008s0012 Marchantia polymorpha HOM05D005839 ORTHO05D005686 7.9e-07 60.1 31 67.7


User provided reference genes

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