Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 2.2e-61 238.8 121 100.0
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 7.5e-54 213.8 121 87.6
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.7e-53 212.6 121 87.6
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.8e-52 209.1 121 84.3
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 5.3e-52 207.6 121 84.3
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 7.7e-51 203.8 121 83.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.1e-49 199.9 121 80.2
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.2e-48 196.4 121 81.0
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 6.3e-45 184.1 121 75.2
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 3.1e-44 181.8 121 71.9
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 4.5e-43 177.9 121 71.1
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 7.7e-43 177.2 121 70.2
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 7.7e-43 177.2 121 71.1
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.0e-42 176.8 121 71.1
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 2.2e-42 175.6 121 70.2
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 2.2e-42 175.6 121 68.6
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 2.9e-42 175.3 121 70.2
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 1.1e-41 173.3 121 68.6
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.5e-41 172.9 121 69.4
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 1.9e-41 172.6 121 68.6
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 2.5e-41 172.2 121 69.4
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.2e-41 171.4 121 71.1
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 4.2e-41 171.4 121 67.8
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 4.2e-41 171.4 121 68.6
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 5.5e-41 171.0 121 68.6
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 5.5e-41 171.0 121 67.8
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 7.2e-41 170.6 121 67.8
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 7.2e-41 170.6 121 67.8
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 7.2e-41 170.6 121 69.4
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.2e-40 169.9 121 70.2
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 1.6e-40 169.5 121 67.8
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 1.6e-40 169.5 121 70.2
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.1e-40 169.1 121 68.6
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 2.8e-40 168.7 121 67.8
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 3.6e-40 168.3 121 66.1
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 4.7e-40 167.9 121 67.8
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 4.7e-40 167.9 121 68.6
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 4.7e-40 167.9 121 68.6
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 8.0e-40 167.2 121 66.9
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 8.0e-40 167.2 121 67.8
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 8.0e-40 167.2 121 66.9
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 8.0e-40 167.2 121 67.8
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 1.0e-39 166.8 121 66.9
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.4e-39 166.4 121 66.1
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.4e-39 166.4 121 69.4
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.8e-39 166.0 141 60.3
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 1.8e-39 166.0 121 66.9
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.8e-39 166.0 121 65.3
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 2.3e-39 165.6 121 66.9
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 3.0e-39 165.2 121 66.9
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 4.0e-39 164.9 121 67.8
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 4.0e-39 164.9 121 66.9
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 4.0e-39 164.9 121 66.1
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 5.2e-39 164.5 121 66.9
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 6.8e-39 164.1 121 68.6
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 6.8e-39 164.1 121 66.9
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 8.8e-39 163.7 121 66.9
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.2e-38 163.3 121 62.8
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.5e-38 162.9 121 65.3
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.0e-38 162.5 121 66.1
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.0e-38 162.5 121 66.1
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 2.6e-38 162.2 121 67.8
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 1.3e-37 159.8 110 71.8
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.3e-37 159.8 121 66.9
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.7e-37 159.5 121 63.6
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.7e-37 159.5 121 66.1
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 2.2e-37 159.1 121 66.9
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 2.2e-37 159.1 125 65.6
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 4.9e-37 157.9 123 65.9
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.8e-36 156.0 108 69.4
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 1.8e-36 156.0 115 67.0
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.4e-36 155.6 108 69.4
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 3.1e-36 155.2 109 71.6
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 9.2e-36 153.7 121 62.8
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 5.9e-35 151.0 108 67.6
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 7.8e-35 150.6 102 70.6
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.3e-34 149.8 247 40.1
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.3e-34 149.8 247 40.1
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.3e-34 149.8 108 68.5
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 1.9e-33 146.0 156 53.2
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 7.3e-33 144.1 109 66.1
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.6e-32 142.9 105 65.7
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 2.6e-30 135.6 113 57.5
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 3.4e-30 135.2 121 56.2
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.3e-29 133.3 121 57.0
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 8.3e-29 130.6 182 44.0
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.9e-25 119.4 95 65.3
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 4.3e-25 118.2 201 39.8
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.2e-24 116.7 86 68.6
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 2.8e-24 115.5 121 50.4
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 3.6e-24 115.2 89 66.3
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 5.8e-22 107.8 273 29.7
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.6e-19 99.8 64 75.0
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 1.9e-17 92.8 83 51.8
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 3.3e-17 92.0 123 44.7
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 2.3e-15 85.9 58 75.9
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 1.2e-14 83.6 124 38.7
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.5e-14 83.2 51 68.6
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.6e-14 82.4 58 74.1
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 3.4e-14 82.0 121 40.5
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 3.2e-12 75.5 55 65.5
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 5.4e-12 74.7 114 36.8
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 1.2e-11 73.6 51 64.7
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 1.0e-10 70.5 89 44.9
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 4.3e-09 65.1 46 67.4


User provided reference genes

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