Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16310_v3 Cicer arietinum L. HOM05D006366 ORTHO05D008467 3.8e-66 254.6 120 100.0
Psat5g107960 Pisum sativum HOM05D006366 ORTHO05D008467 4.2e-57 224.6 116 88.8
Lj6g0003976 Lotus japonicus HOM05D006366 ORTHO05D008467 9.3e-57 223.4 116 87.9
Medtr3g081290 Medicago truncatula HOM05D006366 ORTHO05D008467 4.6e-56 221.1 113 91.2
Glyma.13G004000 Glycine max HOM05D006366 ORTHO05D008467 6.0e-56 220.7 116 87.1
Glyma.20G065200 Glycine max HOM05D006366 ORTHO05D008467 1.8e-55 219.2 116 86.2
arahy.Tifrunner.gnm1.ann1.Q8HZUY Arachis hypogaea HOM05D006366 ORTHO05D008467 2.3e-55 218.8 119 82.4
arahy.Tifrunner.gnm1.ann1.ZW16GX Arachis hypogaea HOM05D006366 ORTHO05D008467 2.3e-55 218.8 119 82.4
Phvul.006G002200 Phaseolus vulgaris HOM05D006366 ORTHO05D008467 1.5e-54 216.1 116 84.5
Thecc.01G164300 Theobroma cacao HOM05D006366 ORTHO05D008467 1.8e-52 209.1 116 82.8
Duzib147G0458 Durio zibethinus HOM05D006366 ORTHO05D008467 3.1e-52 208.4 116 81.9
Lalb_Chr22g0360801 Lupinus albus HOM05D006366 ORTHO05D008467 9.0e-52 206.8 113 81.4
Gohir.A12G087400 Gossypium hirsutum HOM05D006366 ORTHO05D008467 3.4e-51 204.9 116 80.2
Gorai.008G096000 Gossypium raimondii HOM05D006366 ORTHO05D008467 3.4e-51 204.9 116 80.2
CANSAT64G1607 Cannabis sativa HOM05D006366 ORTHO05D008467 5.9e-51 204.1 116 81.0
Cfa017853 Carpinus fangiana HOM05D006366 ORTHO05D008467 5.9e-51 204.1 116 81.0
Gohir.D12G085600 Gossypium hirsutum HOM05D006366 ORTHO05D008467 1.3e-50 203.0 116 79.3
RcHm_v2.0_Chr2g0154731 Rosa chinensis HOM05D006366 ORTHO05D008467 2.9e-50 201.8 119 77.3
COL.COLO4_29916 Corchorus olitorius HOM05D006366 ORTHO05D008467 6.5e-50 200.7 116 78.4
Eucgr.K01331 Eucalyptus grandis HOM05D006366 ORTHO05D008467 6.5e-50 200.7 116 81.0
Prupe.3G191400 Prunus persica HOM05D006366 ORTHO05D008467 1.1e-49 199.9 116 80.2
GSVIVG01012987001 Vitis vinifera HOM05D006366 ORTHO05D008467 1.1e-49 199.9 114 81.6
MSTRG.24998 Avicennia marina HOM05D006366 ORTHO05D008467 1.4e-49 199.5 111 83.8
AL7G40860 Arabidopsis lyrata HOM05D006366 ORTHO05D008467 2.5e-49 198.7 113 79.6
Nitab4.5_0006724g0060 Nicotiana tabacum HOM05D001798 ORTHO05D008467 2.5e-49 198.7 113 80.5
Ciclev10009311m.g Citrus clementina HOM05D006366 ORTHO05D008467 4.2e-49 198.0 116 79.3
FAN05G0502 Fragaria x ananassa HOM05D006366 ORTHO05D008467 4.2e-49 198.0 113 80.5
Nitab4.5_0006644g0050 Nicotiana tabacum HOM05D006366 ORTHO05D008467 5.5e-49 197.6 117 76.9
Migut.C00287 Erythranthe guttata HOM05D006366 ORTHO05D008467 7.2e-49 197.2 116 77.6
PGSC0003DMG400000936 Solanum tuberosum HOM05D006366 ORTHO05D008467 7.2e-49 197.2 117 76.9
CiPaw.15G093200 Carya illinoinensis HOM05D006366 ORTHO05D008467 9.4e-49 196.8 114 79.8
Peaxi162Scf00351g00618 Petunia axillaris HOM05D006366 ORTHO05D008467 9.4e-49 196.8 117 76.9
Solyc07g044830.3 Solanum lycopersicum HOM05D006366 ORTHO05D008467 9.4e-49 196.8 117 76.9
Atru.chr8.945 Acer truncatum HOM05D006366 ORTHO05D008467 1.6e-48 196.1 116 77.6
FAN09G0641 Fragaria x ananassa HOM05D006366 ORTHO05D008467 1.6e-48 196.1 113 79.6
TWI60G0958 Tripterygium wilfordii HOM05D006366 ORTHO05D008467 1.6e-48 196.1 114 80.7
Dinv26512 Davidia involucrata HOM05D006366 ORTHO05D008467 2.1e-48 195.7 111 81.1
DCAR_009833 Daucus carota HOM05D006366 ORTHO05D008467 2.7e-48 195.3 111 77.5
MD09G1135300 Malus domestica HOM05D006366 ORTHO05D008467 2.7e-48 195.3 116 76.7
Sed0019883 Sechium edule HOM05D006366 ORTHO05D008467 2.7e-48 195.3 116 75.9
VMungo0540G1919 Vigna mungo HOM05D006366 ORTHO05D008467 2.7e-48 195.3 101 88.1
Cpa.g.sc8.298 Carica papaya HOM05D006366 ORTHO05D008467 3.6e-48 194.9 116 79.3
Sabra16G0023400 Salix brachista HOM05D006366 ORTHO05D008467 3.6e-48 194.9 116 77.6
Sabra16G0028900 Salix brachista HOM05D006366 ORTHO05D008467 3.6e-48 194.9 116 77.6
Sp7g13140 Schrenkiella parvula HOM05D006366 ORTHO05D008467 4.6e-48 194.5 113 81.4
THA.LOC104803019 Tarenaya hassleriana HOM05D006366 ORTHO05D008467 4.6e-48 194.5 116 77.6
CAN.G946.5 Capsicum annuum HOM05D006366 ORTHO05D008467 6.1e-48 194.1 117 76.9
Manes.09G000100 Manihot esculenta HOM05D006366 ORTHO05D008467 7.9e-48 193.7 116 78.4
Sopen07g023380 Solanum pennellii HOM05D006366 ORTHO05D008467 7.9e-48 193.7 117 75.2
Carub.0007s2713 Capsella rubella HOM05D006366 ORTHO05D008467 1.0e-47 193.4 113 78.8
Potri.016G022700 Populus trichocarpa HOM05D006366 ORTHO05D008467 1.4e-47 193.0 116 76.7
A05p16880 Brassica napus HOM05D006366 ORTHO05D008467 1.8e-47 192.6 113 79.6
BraA05t20592Z Brassica rapa HOM05D006366 ORTHO05D008467 1.8e-47 192.6 113 79.6
CSS0012855 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 1.8e-47 192.6 115 75.7
Cc05_g00620 Coffea canephora HOM05D006366 ORTHO05D008467 2.3e-47 192.2 112 78.6
Aa31LG9G2360 Aethionema arabicum HOM05D006366 ORTHO05D008467 3.0e-47 191.8 113 77.9
AT4G14965 Arabidopsis thaliana HOM05D006366 ORTHO05D008467 3.0e-47 191.8 113 78.8
CARHR221600 Cardamine hirsuta HOM05D006366 ORTHO05D008467 3.0e-47 191.8 113 77.9
Rhsim11G0024700 Rhododendron simsii HOM05D006366 ORTHO05D008467 3.9e-47 191.4 112 76.8
Actinidia01262 Actinidia chinensis HOM05D006366 ORTHO05D008467 5.1e-47 191.0 112 76.8
BcaB02g07847 Brassica carinata HOM05D006366 ORTHO05D008467 5.1e-47 191.0 113 78.8
CSS0005885 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 5.1e-47 191.0 112 75.9
CSS0048073 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 5.1e-47 191.0 112 75.9
MBI07_g10945_MAGBIO Magnolia biondii HOM05D006366 ORTHO05D008467 5.1e-47 191.0 111 79.3
TAR624G0611 Trochodendron aralioides HOM05D006366 ORTHO05D008467 5.1e-47 191.0 113 77.9
C06p16670 Brassica napus HOM05D006366 ORTHO05D008467 6.7e-47 190.7 113 78.8
BolC6t36868H Brassica oleracea HOM05D006366 ORTHO05D008467 6.7e-47 190.7 113 78.8
CSS0020773 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 6.7e-47 190.7 115 74.8
Lsat_1_v5_gn_3_36241 Lactuca sativa HOM05D006366 ORTHO05D008467 6.7e-47 190.7 106 83.0
PGR004G2515 Punica granatum HOM05D006366 ORTHO05D008467 6.7e-47 190.7 113 77.0
SalBow7G2372 Salvia bowleyana HOM05D006366 ORTHO05D008467 8.8e-47 190.3 112 77.7
CsaV3_4G032210 Cucumis sativus L. HOM05D006366 ORTHO05D008467 2.0e-46 189.1 116 75.0
HanXRQChr17g0540961 Helianthus annuus HOM05D006366 ORTHO05D008467 2.0e-46 189.1 111 77.5
Nn3g18048 Nelumbo nucifera HOM05D006366 ORTHO05D008467 2.0e-46 189.1 116 75.9
ClCG11G016700 Citrullus lanatus HOM05D006366 ORTHO05D008467 3.3e-46 188.3 116 74.1
Actinidia32776 Actinidia chinensis HOM05D006366 ORTHO05D008467 4.3e-46 188.0 112 75.9
Aqoxy1G01337 Aquilegia oxysepala HOM05D006366 ORTHO05D008467 4.3e-46 188.0 111 76.6
Thhalv10026107m.g Eutrema salsugineum HOM05D006366 ORTHO05D008467 5.7e-46 187.6 113 77.0
Sc06g0005840 Simmondsia chinensis HOM05D006366 ORTHO05D008467 5.7e-46 187.6 120 70.8
SGA_v2.0_scaffold26G11309 Striga asiatica HOM05D006366 ORTHO05D008467 5.7e-46 187.6 117 70.9
vmacro00060 Vaccinium macrocarpon HOM05D006366 ORTHO05D008467 5.7e-46 187.6 112 75.0
MELO3C026394.2 Cucumis melo HOM05D006366 ORTHO05D008467 1.3e-45 186.4 116 74.1
Hma1.2p1_0451F.1_g155730 Hydrangea macrophylla HOM05D006366 ORTHO05D008467 1.3e-45 186.4 119 70.6
HPP92_021470 Vanilla planifolia HOM05D006366 ORTHO05D008467 1.3e-45 186.4 114 71.9
Hund24327 Selenicereus undatus HOM05D006366 ORTHO05D008467 1.7e-45 186.0 114 71.9
FAN14G5422 Fragaria x ananassa HOM05D006366 ORTHO05D008467 4.8e-45 184.5 104 80.8
EL10Ac9g22887 Beta vulgaris HOM05D006366 ORTHO05D008467 6.3e-45 184.1 116 73.3
TPR.G31172 Trifolium pratense HOM05D006366 ORTHO05D008467 6.3e-45 184.1 93 91.4
BcaC08g44258 Brassica carinata HOM05D006366 ORTHO05D008467 1.1e-44 183.3 104 81.7
AUR62015180 Chenopodium quinoa HOM05D006366 ORTHO05D008467 1.1e-44 183.3 116 72.4
PSO541G2638 Papaver somniferum HOM05D006366 ORTHO05D008467 1.1e-44 183.3 111 73.9
AUR62017635 Chenopodium quinoa HOM05D006366 ORTHO05D008467 2.4e-44 182.2 116 72.4
PSO675G0146 Papaver somniferum HOM05D006366 ORTHO05D008467 4.1e-44 181.4 111 73.9
Zm00001eb400650 Zea mays HOM05D006366 ORTHO05D008467 5.9e-43 177.6 112 70.5
ECA246G1127 Erigeron canadensis HOM05D006366 ORTHO05D008467 1.9e-41 172.6 103 77.7
Os03g0205500 Oryza sativa ssp. japonica HOM05D006366 ORTHO05D008467 5.5e-41 171.0 112 67.0
Oeu011642.1 Olea europaea HOM05D006366 ORTHO05D008467 1.6e-40 169.5 93 83.9
ATR0737G147 Amborella trichopoda HOM05D006366 ORTHO05D008467 2.1e-40 169.1 113 67.3
Lj3A1010G53 Lonicera japonica HOM05D006366 ORTHO05D008467 4.4e-38 161.4 126 64.3
SEGI_23922 Sequoiadendron giganteum HOM05D006366 ORTHO05D008467 1.7e-37 159.5 112 65.2
Peaxi162Scf01158g00018 Petunia axillaris HOM05D006366 ORTHO05D008467 3.7e-37 158.3 97 75.3
SHI11338 Sapria himalayana HOM05D006366 ORTHO05D008467 8.2e-37 157.1 107 67.3
SMO367G0820 Selaginella moellendorffii HOM05D006366 ORTHO05D008467 9.7e-30 133.7 114 51.8
unitig_0.g1057 Utricularia gibba HOM05D001088 ORTHO05D002099 4.8e-29 131.3 80 76.2
Potri.006G023801 Populus trichocarpa HOM05D006366 ORTHO05D008467 8.5e-26 120.6 80 66.2
Pp3c18_20590 Physcomitrium patens HOM05D006366 ORTHO05D008467 6.7e-23 110.9 115 44.3
FvH4_6g40100 Fragaria vesca HOM05D006366 ORTHO05D008467 1.5e-22 109.8 61 85.2
Mapoly0115s0059 Marchantia polymorpha HOM05D006366 ORTHO05D008467 1.5e-22 109.8 118 43.2
CBR_g19221 Chara braunii HOM05D006366 ORTHO05D008467 9.7e-22 107.1 114 43.9
Pp3c21_2980 Physcomitrium patens HOM05D006366 ORTHO05D008467 4.8e-21 104.8 115 41.7
Haze_18340 Corylus avellana HOM05D006366 ORTHO05D008467 1.3e-18 96.7 57 73.7
Cre03.g148100 Chlamydomonas reinhardtii HOM05D006366 ORTHO05D008467 2.8e-13 79.0 114 40.4
PRCOL_00003273 Prasinoderma coloniale HOM05D006366 ORTHO05D008467 2.8e-13 79.0 111 39.6
MCO15G416 Micromonas commoda HOM05D006366 ORTHO05D008467 3.1e-12 75.5 113 37.2
Aqoxy2G02028 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-08 62.4 54 59.3
COL.COLO4_33717 Corchorus olitorius HOM05D006366 ORTHO05D008467 6.8e-07 57.8 45 62.2
A08p11570 Brassica napus HOM05D006366 ORTHO05D042302 4.4e-06 55.1 39 69.2
BraA08t33149Z Brassica rapa HOM05D006366 ORTHO05D042302 4.4e-06 55.1 39 69.2


User provided reference genes

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