Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 5.9e-181 637.5 341 100.0
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 2.6e-128 462.6 410 67.8
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 1.6e-122 443.4 412 65.5
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 3.6e-106 389.0 402 61.2
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 2.1e-101 373.2 400 57.2
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 1.1e-91 340.9 289 70.2
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 8.2e-82 308.1 396 46.5
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 1.2e-80 304.3 361 47.9
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 3.2e-78 296.2 400 43.2
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 7.9e-77 291.6 396 45.2
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.4e-76 290.8 396 44.9
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 1.4e-76 290.8 404 42.8
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 3.9e-76 289.3 354 48.0
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 3.3e-75 286.2 285 55.1
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 5.7e-75 285.4 405 44.4
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 9.7e-75 284.6 279 55.2
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 3.1e-73 279.6 407 42.0
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 4.1e-73 279.3 283 55.5
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 5.3e-73 278.9 403 45.7
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 2.0e-72 276.9 279 55.2
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.3e-71 274.2 395 42.5
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 3.8e-71 272.7 362 45.6
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 3.8e-71 272.7 406 42.9
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 5.0e-71 272.3 406 42.9
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.9e-70 270.4 362 45.6
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 1.9e-70 270.4 399 42.6
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 3.2e-70 269.6 362 42.8
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 7.2e-70 268.5 281 54.1
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 2.7e-69 266.5 366 43.4
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 2.7e-69 266.5 417 40.8
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 3.6e-69 266.2 281 54.4
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 4.7e-69 265.8 363 43.5
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 4.7e-69 265.8 303 49.2
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 1.0e-68 264.6 365 44.9
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.4e-68 264.2 286 52.4
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 3.9e-68 262.7 360 42.8
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 3.9e-68 262.7 367 42.2
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 5.2e-68 262.3 282 50.4
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 5.2e-68 262.3 394 42.9
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 1.1e-67 261.2 398 40.7
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.5e-67 260.8 367 42.0
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.4e-67 259.2 360 42.8
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 5.7e-67 258.8 372 42.5
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 5.7e-67 258.8 308 50.0
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 2.2e-66 256.9 278 50.4
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 4.8e-66 255.8 403 40.9
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 8.2e-66 255.0 370 40.8
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.4e-65 253.4 284 48.6
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 4.1e-65 252.7 404 41.8
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 2.0e-64 250.4 403 42.9
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 7.7e-64 248.4 354 43.8
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.9e-63 246.5 279 50.9
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 1.1e-62 244.6 395 41.0
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 1.9e-62 243.8 353 40.5
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 3.2e-62 243.0 394 40.4
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 4.2e-62 242.7 276 50.7
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 4.2e-62 242.7 280 50.7
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 7.2e-62 241.9 351 42.5
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 4.7e-61 239.2 362 42.5
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 1.0e-60 238.0 292 43.5
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 2.3e-60 236.9 368 41.6
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 2.3e-60 236.9 365 38.9
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 5.2e-60 235.7 365 41.4
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.5e-59 234.2 280 46.8
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 2.0e-59 233.8 395 40.8
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 5.7e-59 232.3 395 40.0
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 7.5e-59 231.9 395 40.0
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 7.5e-59 231.9 365 42.5
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 2.2e-58 230.3 395 39.7
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 3.5e-56 223.0 408 38.7
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 1.3e-55 221.1 408 38.5
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 1.0e-52 211.5 387 37.7
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 5.7e-51 205.7 165 58.8
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 7.5e-51 205.3 273 45.4
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 1.4e-49 201.1 271 45.4
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 2.9e-47 193.4 284 43.3
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 9.5e-46 188.3 320 39.7
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 1.2e-45 188.0 402 35.6
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.8e-45 186.8 253 43.1
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 6.8e-44 182.2 362 38.1
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 1.9e-38 164.1 108 75.0
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 1.2e-37 161.4 238 42.9
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.6e-37 161.0 178 51.7
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 1.4e-36 157.9 277 35.4
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 5.8e-27 125.9 165 45.5
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 7.8e-24 115.5 281 28.5
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 6.6e-23 112.5 305 32.1
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 1.5e-19 101.3 264 28.8
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 3.4e-19 100.1 199 38.2
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 1.1e-17 95.1 67 73.1
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 9.2e-17 92.0 73 61.6
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 6.0e-16 89.4 269 27.1
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 2.8e-13 80.5 179 36.9
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 4.0e-12 76.6 64 59.4
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.8e-10 70.1 66 51.5


User provided reference genes

Program Settings