Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16248_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 6.4e-171 604.0 302 100.0
TPR.G15633 Trifolium pratense HOM05D000051 ORTHO05D000015 3.7e-70 269.2 297 56.2
TPR.G4055 Trifolium pratense HOM05D000051 ORTHO05D000015 2.1e-57 226.9 287 49.1
Medtr1g115250 Medicago truncatula HOM05D000051 ORTHO05D000015 1.0e-51 208.0 242 49.6
Medtr7g094030 Medicago truncatula HOM05D000051 ORTHO05D030175 1.7e-51 207.2 308 45.5
Lj3g0011429 Lotus japonicus HOM05D000051 ORTHO05D000015 8.4e-46 188.3 307 41.0
Lj2g0008890 Lotus japonicus HOM05D000051 ORTHO05D000015 2.1e-41 173.7 296 40.9
TPR.G16809 Trifolium pratense HOM05D000051 ORTHO05D000015 9.0e-40 168.3 290 38.3
Lj2g0025192 Lotus japonicus HOM05D000051 ORTHO05D000015 1.7e-38 164.1 297 37.7
Glyma.13G262900 Glycine max HOM05D000051 ORTHO05D000015 1.7e-35 154.1 293 37.9
Glyma.17G193700 Glycine max HOM05D000051 ORTHO05D000015 1.9e-34 150.6 300 35.7
Lj2g0017050 Lotus japonicus HOM05D000051 ORTHO05D000015 5.6e-34 149.1 302 35.8
Medtr2g082880 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-33 147.9 261 41.4
Phvul.005G070500 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 1.4e-32 144.4 279 36.2
Glyma.13G262800 Glycine max HOM05D000051 ORTHO05D000015 1.4e-29 134.4 301 31.9
Glyma.13G263100 Glycine max HOM05D000051 ORTHO05D000015 5.5e-29 132.5 305 34.1
arahy.Tifrunner.gnm1.ann1.NSP7CP Arachis hypogaea HOM05D000051 ORTHO05D000015 9.3e-29 131.7 293 33.1
Glyma.17G194900 Glycine max HOM05D000051 ORTHO05D000015 1.2e-28 131.3 299 38.8
VMungo1080G1404 Vigna mungo HOM05D000051 ORTHO05D000015 2.7e-28 130.2 302 31.8
Medtr4g032845 Medicago truncatula HOM05D000051 ORTHO05D000015 3.5e-28 129.8 308 34.1
Glyma.15G242400 Glycine max HOM05D000051 ORTHO05D000015 4.6e-28 129.4 294 32.3
Glyma.15G242200 Glycine max HOM05D000051 ORTHO05D000015 1.3e-27 127.9 284 33.1
Medtr2g082800 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-27 127.9 253 39.9
Phvul.005G065100 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 2.3e-27 127.1 301 31.6
Medtr2g072720 Medicago truncatula HOM05D000051 ORTHO05D000015 3.9e-27 126.3 309 35.0
Lj1g0022871 Lotus japonicus HOM05D000051 ORTHO05D000015 8.7e-27 125.2 306 34.3
TPR.G16816 Trifolium pratense HOM05D000051 ORTHO05D000015 8.7e-27 125.2 302 34.1
Phvul.005G064900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 1.6e-25 120.9 284 30.3
TPR.G16802 Trifolium pratense HOM05D000051 ORTHO05D000015 1.6e-25 120.9 300 30.3
VMungo1080G0904 Vigna mungo HOM05D000051 ORTHO05D000015 2.1e-25 120.6 303 34.0
VMungo1080G0675 Vigna mungo HOM05D000051 ORTHO05D000015 3.7e-25 119.8 290 29.3
arahy.Tifrunner.gnm1.ann1.U4L8N2 Arachis hypogaea HOM05D000051 ORTHO05D000015 6.2e-25 119.0 302 34.1
arahy.Tifrunner.gnm1.ann1.AI520R Arachis hypogaea HOM05D000051 ORTHO05D000015 8.1e-25 118.6 304 34.9
arahy.Tifrunner.gnm1.ann1.L5GG2G Arachis hypogaea HOM05D000051 ORTHO05D000015 8.1e-25 118.6 299 30.8
Medtr1g025870 Medicago truncatula HOM05D000051 ORTHO05D000015 8.1e-25 118.6 301 34.2
TPR.G6877 Trifolium pratense HOM05D000051 ORTHO05D000015 8.1e-25 118.6 300 30.3
Lj3g0000880 Lotus japonicus HOM05D000051 ORTHO05D000015 1.1e-24 118.2 299 31.8
Lj3g0017405 Lotus japonicus HOM05D000051 ORTHO05D000015 1.4e-24 117.9 285 30.5
TPR.G16797 Trifolium pratense HOM05D000051 ORTHO05D000015 4.0e-24 116.3 309 34.3
Medtr2g072730 Medicago truncatula HOM05D000051 ORTHO05D000015 9.0e-24 115.2 296 34.5
Medtr2g082850 Medicago truncatula HOM05D000051 ORTHO05D000015 9.0e-24 115.2 199 39.2
Medtr2g072530 Medicago truncatula HOM05D000051 ORTHO05D000015 3.4e-23 113.2 299 30.1
TPR.G16810 Trifolium pratense HOM05D000051 ORTHO05D000015 4.5e-23 112.8 301 32.9
TPR.G26409 Trifolium pratense HOM05D000051 ORTHO05D000015 2.9e-22 110.2 314 31.2
arahy.Tifrunner.gnm1.ann1.GLFE0R Arachis hypogaea HOM05D000051 ORTHO05D000015 6.5e-22 109.0 303 28.1
Lj3g0005297 Lotus japonicus HOM05D000051 ORTHO05D000015 1.1e-21 108.2 291 28.5
Lj3g0017701 Lotus japonicus HOM05D000051 ORTHO05D000015 1.9e-21 107.5 293 28.7
Lj3g0027587 Lotus japonicus HOM05D000051 ORTHO05D000015 1.9e-21 107.5 305 31.8
TPR.G21837 Trifolium pratense HOM05D039137 ORTHO05D030175 1.9e-21 107.5 211 37.9
arahy.Tifrunner.gnm1.ann1.45LTGK Arachis hypogaea HOM05D000051 ORTHO05D000015 3.2e-21 106.7 322 27.6
Medtr7g094050 Medicago truncatula HOM05D000051 ORTHO05D000015 3.2e-21 106.7 127 48.8
arahy.Tifrunner.gnm1.ann1.HYYB50 Arachis hypogaea HOM05D000051 ORTHO05D000015 4.2e-21 106.3 308 33.1
Lj3g0010579 Lotus japonicus HOM05D000051 ORTHO05D000015 2.1e-20 104.0 291 27.8
TPR.G6826 Trifolium pratense HOM05D000051 ORTHO05D000015 2.1e-20 104.0 302 29.1
arahy.Tifrunner.gnm1.ann1.FIN1P6 Arachis hypogaea HOM05D000051 ORTHO05D000015 3.5e-20 103.2 304 33.6
Psat5g251720 Pisum sativum HOM05D000051 ORTHO05D000015 5.7e-18 95.9 143 46.2
Medtr1g115245 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-17 94.7 128 48.4
Lj2g0018232 Lotus japonicus HOM05D000051 ORTHO05D000015 3.1e-16 90.1 207 35.3
Lj3g0014741 Lotus japonicus HOM05D000051 ORTHO05D000015 3.1e-16 90.1 302 28.8
Medtr6g022350 Medicago truncatula HOM05D000051 ORTHO05D000015 3.1e-16 90.1 260 31.2
Glyma.13G262700 Glycine max HOM05D000051 ORTHO05D000015 4.1e-16 89.7 241 31.1
Psat3g100000 Pisum sativum HOM05D039137 ORTHO05D030175 6.9e-16 89.0 176 40.9
Medtr2g072710 Medicago truncatula HOM05D000051 ORTHO05D000015 7.6e-15 85.5 110 45.5
Psat3g099840 Pisum sativum HOM05D039137 ORTHO05D030175 1.3e-14 84.7 145 44.1
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 2.9e-14 83.6 311 28.3
TPR.G7505 Trifolium pratense HOM05D000051 ORTHO05D000015 1.1e-13 81.6 302 28.5
Medtr5g063450 Medicago truncatula HOM05D056080 ORTHO05D048823 2.5e-13 80.5 146 41.1
PSO478G2955 Papaver somniferum HOM05D000051 ORTHO05D000015 3.2e-13 80.1 261 30.3
TPR.G3816 Trifolium pratense HOM05D000051 ORTHO05D000015 3.2e-13 80.1 112 44.6
Medtr5g005700 Medicago truncatula HOM05D000051 ORTHO05D000015 4.2e-13 79.7 293 29.7
arahy.Tifrunner.gnm1.ann1.H22LZM Arachis hypogaea HOM05D000051 ORTHO05D000015 5.5e-13 79.3 124 41.1
PSO017G2530 Papaver somniferum HOM05D000051 ORTHO05D000015 9.3e-13 78.6 261 29.5
Cfa016050 Carpinus fangiana HOM05D000051 ORTHO05D000015 1.3e-11 74.7 275 25.8
Medtr2g082780 Medicago truncatula HOM05D000051 ORTHO05D000015 5.1e-11 72.8 64 56.2
Rhsim04G0037500 Rhododendron simsii HOM05D000051 ORTHO05D000015 6.7e-11 72.4 275 27.6
Medtr3g048290 Medicago truncatula HOM05D000051 ORTHO05D000015 1.1e-10 71.6 310 24.8
RcHm_v2.0_Chr5g0069821 Rosa chinensis HOM05D000051 ORTHO05D000015 1.1e-10 71.6 276 27.2
Cfa000228 Carpinus fangiana HOM05D000051 ORTHO05D000015 1.5e-10 71.2 272 26.5
Medtr4g080787 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-10 71.2 300 25.0
PSO339G6140 Papaver somniferum HOM05D000051 ORTHO05D000015 3.3e-10 70.1 272 26.5
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 4.3e-10 69.7 283 26.5
TPR.G29389 Trifolium pratense HOM05D000051 ORTHO05D000015 4.3e-10 69.7 98 42.9
Aqoxy1G01789 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 5.7e-10 69.3 304 26.0
PSO832G4612 Papaver somniferum HOM05D000051 ORTHO05D000015 7.4e-10 68.9 281 26.7
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 9.7e-10 68.6 301 24.9
PGSC0003DMG401001040 Solanum tuberosum HOM05D000051 ORTHO05D000015 9.7e-10 68.6 300 25.3
Cfa000227 Carpinus fangiana HOM05D000051 ORTHO05D000015 1.3e-09 68.2 277 26.4
Lalb_Chr03g0031401 Lupinus albus HOM05D000051 ORTHO05D000015 1.3e-09 68.2 107 42.1
QL05p074536 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-09 68.2 284 27.1
RcHm_v2.0_Chr5g0069761 Rosa chinensis HOM05D000051 ORTHO05D000015 1.3e-09 68.2 278 25.2
PSO170G3960 Papaver somniferum HOM05D000051 ORTHO05D000015 2.2e-09 67.4 286 26.6
Ca_03848_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 2.8e-09 67.0 302 26.2
arahy.Tifrunner.gnm1.ann1.ELME12 Arachis hypogaea HOM05D002329 ORTHO05D000015 3.7e-09 66.6 124 39.5
Eucgr.E04101 Eucalyptus grandis HOM05D000051 ORTHO05D000015 3.7e-09 66.6 286 27.3
Medtr5g007110 Medicago truncatula HOM05D000051 ORTHO05D000015 3.7e-09 66.6 107 41.1
Eucgr.E04106 Eucalyptus grandis HOM05D000051 ORTHO05D000015 4.8e-09 66.2 302 24.2
Lalb_Chr03g0031411 Lupinus albus HOM05D000051 ORTHO05D000015 6.3e-09 65.9 157 29.9
QL01p041819 Quercus lobata HOM05D000051 ORTHO05D000015 8.2e-09 65.5 281 26.7
Aqoxy6G02477 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 1.1e-08 65.1 262 24.4
Cc11_g01210 Coffea canephora HOM05D000051 ORTHO05D000015 1.1e-08 65.1 264 25.8
CAN.G337.100 Capsicum annuum HOM05D000051 ORTHO05D000015 1.4e-08 64.7 295 24.4
Migut.M01792 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.4e-08 64.7 295 25.4
Medtr2g067210 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-08 64.7 221 29.0
TPR.G8360 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-08 64.7 310 24.5
Eucgr.E04098 Eucalyptus grandis HOM05D000051 ORTHO05D000015 1.8e-08 64.3 305 25.9
Dinv17822 Davidia involucrata HOM05D000051 ORTHO05D000015 3.1e-08 63.5 276 25.0
EL10Ac4g07920 Beta vulgaris HOM05D000051 ORTHO05D000015 4.1e-08 63.2 319 27.3
Medtr4g080590 Medicago truncatula HOM05D000051 ORTHO05D000015 5.3e-08 62.8 272 26.8
PGR042G0305 Punica granatum HOM05D000051 ORTHO05D000015 1.2e-07 61.6 306 24.5
RcHm_v2.0_Chr5g0069791 Rosa chinensis HOM05D000051 ORTHO05D000015 1.2e-07 61.6 275 23.3
Duzib213G0754 Durio zibethinus HOM05D000051 ORTHO05D000015 1.5e-07 61.2 245 26.5
Medtr5g007090 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-07 61.2 227 29.1
Cfa000225 Carpinus fangiana HOM05D007920 ORTHO05D009993 2.0e-07 60.8 239 26.8
Cc01_g01510 Coffea canephora HOM05D000051 ORTHO05D000015 2.0e-07 60.8 293 25.3
Lj5g0023504 Lotus japonicus HOM05D000051 ORTHO05D000015 2.0e-07 60.8 111 34.2
MSTRG.15164 Avicennia marina HOM05D000051 ORTHO05D000015 2.6e-07 60.5 279 26.2
Medtr7g023310 Medicago truncatula HOM05D000051 ORTHO05D000015 2.6e-07 60.5 276 25.4
Hund23290 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.6e-07 60.5 308 24.7
PSO832G4603 Papaver somniferum HOM05D000051 ORTHO05D000015 3.4e-07 60.1 303 23.8
QL05p074559 Quercus lobata HOM05D000051 ORTHO05D000015 3.4e-07 60.1 286 24.1
PSO017G2642 Papaver somniferum HOM05D000051 ORTHO05D000015 4.5e-07 59.7 294 22.8
AT5G27750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.9e-07 59.3 116 38.8
Cfa007373 Carpinus fangiana HOM05D000051 ORTHO05D000015 7.7e-07 58.9 285 22.8
QL01p041788 Quercus lobata HOM05D000051 ORTHO05D000015 7.7e-07 58.9 335 23.3
QL05p074600 Quercus lobata HOM05D000051 ORTHO05D000015 7.7e-07 58.9 273 22.7
Lj3g0021941 Lotus japonicus HOM05D000051 ORTHO05D000015 1.0e-06 58.5 313 22.7
AL6G39170 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-06 58.2 284 25.7
Nitab4.5_0011608g0030 Nicotiana tabacum HOM05D000051 ORTHO05D000015 1.3e-06 58.2 287 22.3
Psat1g008320 Pisum sativum HOM05D000051 ORTHO05D000015 1.3e-06 58.2 155 29.0
Medtr2g072650 Medicago truncatula HOM05D000051 ORTHO05D000015 1.7e-06 57.8 81 43.2
COL.COLO4_35136 Corchorus olitorius HOM05D000051 ORTHO05D000015 2.2e-06 57.4 272 25.7
Thhalv10018628m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.2e-06 57.4 276 25.0
Cfa000255 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.9e-06 57.0 277 26.0
Eucgr.E04107 Eucalyptus grandis HOM05D000051 ORTHO05D000015 2.9e-06 57.0 237 26.6
PSO017G6419 Papaver somniferum HOM05D000051 ORTHO05D000015 2.9e-06 57.0 273 24.2
vmacro11759 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 2.9e-06 57.0 282 26.6
MD11G1266700 Malus domestica HOM05D000051 ORTHO05D000015 3.8e-06 56.6 288 29.9
PSO478G4505 Papaver somniferum HOM05D000051 ORTHO05D000015 3.8e-06 56.6 299 25.4
RhsimUnG0013000 Rhododendron simsii HOM05D022656 ORTHO05D022449 3.8e-06 56.6 113 33.6
ECA236G0591 Erigeron canadensis HOM05D000051 ORTHO05D000015 5.0e-06 56.2 275 25.1
RhsimUnG0031600 Rhododendron simsii HOM05D000051 ORTHO05D000015 5.0e-06 56.2 286 25.2
AUR62015692 Chenopodium quinoa HOM05D000689 ORTHO05D000015 6.5e-06 55.8 313 24.6
Nitab4.5_0000397g0270 Nicotiana tabacum HOM05D000051 ORTHO05D000015 6.5e-06 55.8 289 21.8
Peaxi162Scf00450g00852 Petunia axillaris HOM05D000051 ORTHO05D000015 6.5e-06 55.8 274 22.6
QL01p041814 Quercus lobata HOM05D000051 ORTHO05D000015 6.5e-06 55.8 277 26.4
TPR.G7205 Trifolium pratense HOM05D000051 ORTHO05D000015 6.5e-06 55.8 47 53.2
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 8.5e-06 55.5 320 25.9
TWI38G0404 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 8.5e-06 55.5 266 24.8


User provided reference genes

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