Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 5.3e-237 823.9 405 100.0
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 3.3e-207 724.9 405 87.2
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 2.0e-191 672.5 408 81.1
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 1.6e-185 652.9 411 78.3
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 5.2e-184 647.9 409 78.2
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 2.9e-179 632.1 396 77.0
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 8.6e-179 630.6 410 75.4
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 1.0e-168 597.0 409 76.0
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 6.4e-166 587.8 407 71.5
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 1.1e-165 587.0 384 76.6
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 2.0e-164 582.8 389 72.0
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 2.7e-164 582.4 396 71.5
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 3.5e-164 582.0 391 71.6
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 4.7e-161 571.6 371 74.4
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 6.2e-161 571.2 306 90.8
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 1.1e-160 570.5 306 90.5
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 1.2e-159 567.0 415 68.4
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 7.5e-159 564.3 380 70.3
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 1.3e-158 563.5 392 68.4
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 1.4e-157 560.1 386 69.2
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 2.4e-157 559.3 380 69.5
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 5.4e-157 558.1 391 69.1
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 9.2e-157 557.4 380 69.2
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.7e-156 555.8 392 67.1
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 6.0e-156 554.7 400 67.8
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 1.3e-155 553.5 392 66.6
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 1.7e-155 553.1 380 67.9
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 2.3e-155 552.7 402 66.7
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 6.6e-155 551.2 377 71.4
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 8.6e-155 550.8 400 67.2
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 8.6e-155 550.8 371 71.7
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 1.1e-154 550.4 384 69.8
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 1.1e-154 550.4 392 66.3
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.5e-154 550.1 386 68.9
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 3.3e-154 548.9 386 68.7
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 4.3e-154 548.5 375 70.7
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 9.5e-154 547.4 388 67.5
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.2e-153 547.0 386 68.4
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.1e-153 546.2 386 68.1
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.8e-153 545.8 385 66.5
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 8.1e-153 544.3 382 69.9
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 1.4e-152 543.5 381 69.3
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 3.1e-152 542.3 424 64.9
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 4.0e-152 542.0 398 67.1
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 5.2e-152 541.6 393 68.4
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 8.9e-152 540.8 378 69.3
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 8.9e-152 540.8 375 69.6
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 3.4e-151 538.9 381 67.2
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 7.5e-151 537.7 387 66.1
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 9.9e-151 537.3 370 70.0
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 4.6e-148 528.5 379 67.5
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 6.0e-148 528.1 379 67.3
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 1.3e-147 526.9 367 68.9
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 2.3e-147 526.2 391 64.7
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 2.3e-147 526.2 371 67.7
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 8.6e-147 524.2 386 66.3
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 1.1e-146 523.9 393 64.9
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 3.3e-146 522.3 371 67.9
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 4.3e-146 521.9 388 64.9
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 5.6e-146 521.5 396 62.9
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 9.5e-146 520.8 388 64.7
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 8.1e-145 517.7 379 66.5
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 4.0e-144 515.4 379 66.2
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 5.2e-144 515.0 398 63.6
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 1.2e-143 513.8 371 67.4
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.5e-143 513.5 379 64.1
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 1.5e-143 513.5 383 66.1
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 2.6e-143 512.7 366 67.2
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 3.4e-143 512.3 386 64.5
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 5.8e-143 511.5 397 63.7
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 5.8e-143 511.5 397 63.7
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 9.9e-143 510.8 390 63.1
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 1.3e-142 510.4 394 61.9
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 1.7e-142 510.0 394 63.7
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 2.9e-142 509.2 371 66.8
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 1.1e-141 507.3 397 63.7
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 1.1e-141 507.3 397 63.7
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 1.1e-141 507.3 382 64.7
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 1.4e-141 506.9 381 64.3
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 1.9e-141 506.5 405 61.2
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 3.2e-141 505.8 390 63.3
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 7.1e-141 504.6 379 64.9
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.2e-140 503.8 391 62.1
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 2.1e-140 503.1 394 64.7
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 2.7e-140 502.7 402 61.4
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 4.6e-140 501.9 381 63.5
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 1.0e-139 500.7 405 61.2
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 2.3e-139 499.6 379 63.6
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 1.1e-138 497.3 372 64.5
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 4.7e-137 491.9 374 63.6
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 4.7e-137 491.9 376 62.8
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 1.1e-136 490.7 448 55.6
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 3.1e-136 489.2 387 62.0
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 6.9e-136 488.0 389 62.0
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 9.0e-136 487.6 375 62.1
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 1.2e-135 487.3 391 62.9
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 2.6e-135 486.1 375 62.1
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 2.2e-134 483.0 390 60.0
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 2.9e-134 482.6 390 60.0
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 1.1e-133 480.7 378 62.4
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 1.4e-133 480.3 388 60.3
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 1.9e-133 479.9 369 64.0
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 1.6e-132 476.9 383 61.1
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 1.1e-130 470.7 393 61.3
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 3.3e-130 469.2 384 58.9
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 2.4e-125 453.0 400 56.2
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 2.1e-124 449.9 262 82.8
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 2.1e-124 449.9 363 59.5
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 1.8e-123 446.8 349 63.3
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 5.6e-122 441.8 291 72.9
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 1.8e-120 436.8 256 81.2
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 9.0e-120 434.5 390 57.2
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 1.7e-118 430.3 379 55.1
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 8.7e-115 417.9 378 55.3
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 2.6e-111 406.4 378 53.2
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 1.0e-110 404.4 379 55.1
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 2.7e-108 396.4 622 39.9
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.0e-107 394.4 368 52.7
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 8.7e-107 391.3 409 47.2
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 1.9e-101 373.6 351 55.8
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 3.6e-100 369.4 391 50.6
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 1.8e-99 367.1 368 50.0
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 5.7e-98 362.1 265 64.5
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 4.8e-97 359.0 378 50.3
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 5.9e-95 352.1 241 69.3
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 7.2e-93 345.1 253 64.8
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 1.4e-91 340.9 413 45.3
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 1.3e-89 334.3 246 63.0
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 3.7e-89 332.8 244 63.5
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 6.3e-89 332.0 243 63.8
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 8.5e-86 321.6 258 61.2
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 6.1e-84 315.5 248 61.3
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.5e-82 310.8 252 61.5
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 6.3e-81 305.4 192 76.0
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 6.3e-81 305.4 159 92.5
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 3.5e-79 299.7 359 46.0
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 5.5e-61 239.2 284 49.6
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 4.1e-56 223.0 213 52.1
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 2.3e-54 217.2 157 70.7
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 2.7e-47 193.7 130 71.5
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 1.0e-46 191.8 209 51.2
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 6.4e-41 172.6 114 71.9
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 9.2e-40 168.7 408 33.1
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 3.1e-35 153.7 155 51.0
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 5.8e-34 149.4 106 63.2
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 1.3e-33 148.3 173 50.9
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 3.3e-29 133.7 260 31.9
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 3.3e-29 133.7 367 29.2
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 1.5e-21 108.2 102 53.9
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 1.6e-20 104.8 70 62.9
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 1.2e-18 98.6 93 53.8
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 9.9e-18 95.5 93 51.6
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 4.9e-17 93.2 287 27.5
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 1.1e-16 92.0 93 50.5
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 1.1e-11 75.5 77 46.8
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 5.8e-10 69.7 64 51.6
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 4.9e-09 66.6 52 53.8
BolC3t15892H Brassica oleracea HOM05D004508 ORTHO05D005180 8.4e-09 65.9 52 55.8
BcaC06g34436 Brassica carinata HOM05D004508 ORTHO05D005180 1.2e-07 62.0 55 52.7


User provided reference genes

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