Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 5.5e-234 813.9 408 100.0
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.9e-181 639.4 400 79.2
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 1.5e-175 619.8 396 77.8
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 7.5e-175 617.5 394 77.4
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 1.4e-168 596.7 399 73.4
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 9.3e-157 557.4 397 70.0
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 1.5e-151 540.0 392 67.9
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 2.0e-151 539.7 395 68.1
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 4.5e-151 538.5 393 69.0
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 9.3e-149 530.8 392 67.1
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 7.9e-140 501.1 397 63.2
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 5.1e-139 498.4 401 61.8
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 1.9e-138 496.5 397 62.5
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 4.8e-137 491.9 392 62.5
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 4.5e-135 485.3 393 60.6
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 7.6e-135 484.6 397 62.0
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 1.4e-133 480.3 393 60.3
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 1.3e-131 473.8 393 58.8
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.8e-129 466.1 393 56.7
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 1.4e-128 463.8 393 58.3
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 1.4e-128 463.8 393 56.5
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 6.9e-128 461.5 393 56.2
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 9.0e-128 461.1 393 56.5
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.0e-127 459.9 393 56.0
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.9e-126 456.1 393 56.0
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 7.2e-125 451.4 393 55.2
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 1.2e-124 450.7 395 56.7
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 1.4e-123 447.2 391 55.2
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.5e-122 443.7 388 57.0
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 2.2e-121 439.9 390 55.4
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 3.7e-121 439.1 395 54.7
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 4.8e-121 438.7 377 58.4
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 3.1e-120 436.0 390 55.6
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.6e-119 433.0 395 54.4
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 2.6e-119 433.0 395 54.2
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.3e-118 430.6 395 54.2
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.2e-118 429.9 395 53.7
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 2.9e-118 429.5 393 54.7
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 5.0e-118 428.7 395 54.2
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 8.5e-118 427.9 392 54.6
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 1.4e-117 427.2 391 52.9
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.9e-117 426.8 393 54.5
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 4.2e-117 425.6 395 51.6
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 7.2e-117 424.9 393 54.2
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.6e-116 423.7 395 53.4
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 7.9e-116 421.4 395 53.7
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 6.7e-115 418.3 393 53.7
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 1.1e-114 417.5 395 53.2
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 2.0e-114 416.8 395 52.4
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 2.0e-114 416.8 395 53.4
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 2.6e-114 416.4 390 54.1
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 5.7e-114 415.2 395 51.6
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 1.7e-113 413.7 393 53.9
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 4.8e-113 412.1 390 53.1
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 1.4e-112 410.6 394 53.3
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 5.5e-109 398.7 352 56.5
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 1.2e-108 397.5 391 49.9
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.1e-108 396.7 376 52.9
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 8.0e-108 394.8 391 49.1
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 2.3e-107 393.3 392 51.0
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 2.3e-107 393.3 395 48.6
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 3.0e-107 392.9 396 50.3
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 1.1e-106 391.0 396 49.7
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 7.4e-106 388.3 396 47.5
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.8e-104 383.6 389 49.1
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 3.1e-104 382.9 391 48.8
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 5.3e-104 382.1 418 46.2
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 5.3e-104 382.1 418 46.2
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 9.1e-104 381.3 411 47.2
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 5.9e-103 378.6 418 45.7
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.0e-102 377.9 391 49.1
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 1.3e-102 377.5 389 48.6
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 3.8e-102 375.9 419 46.3
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 8.5e-102 374.8 394 47.5
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 1.8e-99 367.1 395 46.6
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 3.0e-99 366.3 420 45.0
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 3.0e-99 366.3 390 49.0
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 6.8e-99 365.2 393 46.3
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 1.2e-98 364.4 396 48.7
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 9.1e-96 354.8 393 45.5
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 4.5e-95 352.4 392 44.9
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 1.3e-94 350.9 390 44.1
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 2.9e-94 349.7 412 44.4
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.9e-94 349.7 390 44.6
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 2.9e-94 349.7 390 44.4
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 5.0e-94 349.0 407 45.7
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 6.5e-94 348.6 395 47.1
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 8.5e-94 348.2 394 45.9
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 7.2e-93 345.1 392 44.6
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.0e-91 341.3 402 45.5
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 1.4e-91 340.9 390 43.3
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 4.0e-91 339.3 404 45.5
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 6.8e-91 338.6 393 46.8
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 7.5e-90 335.1 389 46.5
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 3.7e-89 332.8 392 44.4
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 4.8e-89 332.4 393 45.8
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 2.4e-88 330.1 401 43.9
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.0e-86 324.7 392 43.6
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 1.2e-84 317.8 394 44.7
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 2.8e-84 316.6 398 43.0
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 8.0e-84 315.1 392 41.8
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 1.0e-83 314.7 394 42.6
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.5e-82 310.8 265 55.8
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 7.5e-82 308.5 273 54.6
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 6.3e-81 305.4 387 42.4
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 2.4e-80 303.5 395 40.8
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 3.9e-78 296.2 311 50.5
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 1.4e-75 287.7 309 48.9
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.8e-75 287.3 372 41.1
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 6.4e-73 278.9 333 43.2
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 1.3e-65 254.6 274 45.3
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 1.9e-61 240.7 181 63.5
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 1.1e-59 235.0 421 36.3
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 1.7e-46 191.0 260 38.5
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 6.2e-44 182.6 378 33.6
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 1.2e-39 168.3 260 37.3
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.4e-32 144.8 312 32.4
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 9.3e-32 142.1 415 26.5
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 2.3e-30 137.5 391 29.4
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 5.5e-24 116.3 247 32.8
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 1.0e-22 112.1 254 31.9
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.8e-22 111.3 181 39.2
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.3e-22 110.9 311 24.1
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.3e-22 110.9 311 24.1
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 5.7e-21 106.3 179 38.0
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 7.4e-21 105.9 343 23.0
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 6.2e-20 102.8 297 26.6
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 6.9e-19 99.4 427 24.8
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 2.2e-12 77.8 259 22.4
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 8.5e-09 65.9 246 27.6


User provided reference genes

Program Settings