Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 0.0e+00 1929.8 975 100.0
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 0.0e+00 1587.0 988 83.0
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 0.0e+00 1543.9 995 81.3
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 0.0e+00 1519.6 983 80.5
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 0.0e+00 1307.4 1004 70.5
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 0.0e+00 1264.2 1048 67.7
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 0.0e+00 1235.3 1026 67.5
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 0.0e+00 1231.5 1038 66.3
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 0.0e+00 1209.5 1025 65.9
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 0.0e+00 1088.2 1132 58.1
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 0.0e+00 1083.6 1132 58.1
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 6.9e-275 951.0 556 84.4
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.9e-251 871.3 1127 47.7
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.6e-250 869.4 1127 48.4
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.9e-248 863.2 1107 48.4
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 2.5e-248 862.8 1136 48.8
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 3.2e-248 862.4 1127 48.8
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.4e-246 857.1 1165 46.4
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.3e-246 856.3 1129 47.6
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 3.9e-246 855.5 1026 50.1
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 6.7e-246 854.7 1057 50.6
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 2.4e-243 846.3 1151 47.3
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 3.4e-242 842.4 1096 48.4
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.7e-241 840.1 1152 46.8
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 2.9e-241 839.3 1128 48.3
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 3.8e-241 839.0 1173 46.2
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 5.0e-241 838.6 1014 50.6
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.4e-240 837.0 1015 50.3
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.4e-238 830.5 1205 44.6
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 4.4e-237 825.5 1071 47.8
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.7e-236 823.5 1003 49.8
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.2e-236 823.2 1153 45.6
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 2.4e-235 819.7 1080 48.1
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.1e-235 818.9 1174 45.1
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.7e-233 813.5 1201 45.0
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 7.2e-232 808.1 1087 48.1
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 1.2e-229 800.8 1096 47.4
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.3e-228 797.3 945 50.3
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.7e-228 797.0 1137 44.9
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 2.8e-228 796.2 1024 49.2
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 9.1e-219 764.6 1131 44.7
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 3.5e-218 762.7 1042 46.2
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 8.5e-217 758.1 1015 46.5
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.6e-215 753.8 1131 44.1
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.1e-215 753.4 1103 45.3
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.5e-213 747.3 1104 43.9
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 2.6e-213 746.5 904 49.7
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 9.8e-213 744.6 1147 44.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.8e-212 743.0 1137 43.7
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 6.3e-212 741.9 559 65.3
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 6.1e-207 725.3 1107 42.3
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 4.0e-206 722.6 1096 44.3
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.2e-205 721.1 1085 44.2
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.4e-203 714.1 1070 43.5
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.2e-202 711.1 1009 44.7
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 2.0e-202 710.3 1019 44.7
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 7.8e-202 708.4 1056 43.2
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.0e-201 708.0 867 47.4
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 2.3e-201 706.8 1012 44.2
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 3.0e-201 706.4 1009 43.4
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 3.3e-200 703.0 876 48.5
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 6.2e-199 698.7 992 45.4
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 8.0e-199 698.4 1022 43.5
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.5e-197 694.1 1004 44.1
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 1.5e-197 694.1 1027 43.3
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 2.6e-197 693.3 1003 43.9
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 2.6e-197 693.3 1087 43.3
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.7e-196 690.6 1039 42.7
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 6.4e-196 688.7 1092 42.8
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 1.1e-195 688.0 1024 42.7
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.4e-195 687.6 1077 42.4
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 4.1e-195 686.0 981 44.5
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.0e-194 683.7 1019 42.8
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 2.7e-194 683.3 1100 42.2
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 7.8e-194 681.8 1021 43.8
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.0e-193 681.4 1126 42.8
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 3.9e-193 679.5 990 43.4
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 3.3e-192 676.4 903 46.2
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 1.6e-191 674.1 602 57.1
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 6.8e-190 668.7 1114 40.6
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 1.3e-188 664.5 619 57.7
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.4e-187 660.2 975 45.4
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.2e-187 659.8 1050 42.1
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.2e-186 657.9 983 44.0
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 2.7e-186 656.8 1122 41.3
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.7e-185 654.1 975 45.3
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 8.9e-182 641.7 1098 40.1
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.2e-181 641.3 969 43.7
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.9e-180 636.7 1074 41.1
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 3.8e-180 636.3 884 46.9
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 3.5e-178 629.8 948 44.5
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.7e-177 627.5 905 44.1
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 3.2e-171 606.7 1038 39.8
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 7.8e-170 602.1 1132 37.9
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 4.5e-165 586.3 780 48.1
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 9.9e-165 585.1 894 42.4
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 8.7e-161 572.0 572 51.6
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 4.6e-154 549.7 1050 38.7
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.9e-152 544.3 916 39.8
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.6e-146 523.1 1133 36.5
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.5e-131 473.0 510 53.3
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 2.4e-126 457.6 315 68.9
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.2e-125 455.3 878 39.1
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.4e-123 448.4 734 38.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 7.2e-123 446.0 422 55.7
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.0e-116 425.6 1121 32.3
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 4.0e-113 413.7 631 40.4
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 2.9e-108 397.5 505 41.0
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.2e-107 394.0 634 37.5
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.4e-105 388.7 662 38.1
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 3.0e-105 387.5 791 38.6
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 2.0e-101 374.8 798 35.7
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.2e-98 365.5 868 36.5
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 2.5e-75 288.1 734 36.2
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 2.2e-71 275.0 228 62.3
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.9e-67 261.9 226 58.4
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.2e-64 252.7 637 33.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 3.4e-56 224.6 639 32.1
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 4.2e-46 191.0 584 35.3
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 7.1e-30 137.1 274 33.6
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.2e-24 119.8 84 75.0
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.8e-17 95.9 193 33.7
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 1.7e-15 89.4 69 60.9
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 3.8e-15 88.2 53 73.6
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 8.5e-15 87.0 101 45.5
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 1.1e-14 86.7 93 47.3
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.1e-14 86.7 57 66.7
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 2.1e-13 82.4 153 37.3
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 1.0e-12 80.1 49 71.4
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.5e-11 76.3 173 35.8
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.4e-11 74.7 126 42.9


User provided reference genes

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