Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_16155_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 0.0e+00 2847.4 1489 100.0
Ca_16154_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 0.0e+00 2002.3 1574 72.5
TPR.G28716 Trifolium pratense HOM05D004430 ORTHO05D005088 0.0e+00 1942.2 1553 70.9
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 0.0e+00 1804.6 1576 67.3
TPR.G28721 Trifolium pratense HOM05D004430 ORTHO05D005088 0.0e+00 1782.3 1540 67.3
Medtr3g077450 Medicago truncatula HOM05D004430 ORTHO05D005088 0.0e+00 1759.2 1561 66.7
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 0.0e+00 1596.3 1560 61.5
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 0.0e+00 1580.8 1532 60.8
Glyma.17G087600 Glycine max HOM05D004430 ORTHO05D005088 0.0e+00 1471.8 1586 56.4
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 0.0e+00 1436.8 1600 55.9
Lalb_Chr12g0201701 Lupinus albus HOM05D004430 ORTHO05D005088 0.0e+00 1408.3 1602 55.0
Glyma.05G039400 Glycine max HOM05D004430 ORTHO05D005088 0.0e+00 1380.9 1589 54.2
Lalb_Chr07g0182821 Lupinus albus HOM05D004430 ORTHO05D005088 0.0e+00 1356.7 1602 53.7
arahy.Tifrunner.gnm1.ann1.FBBL0Z Arachis hypogaea HOM05D004430 ORTHO05D005088 0.0e+00 1353.6 1600 53.6
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 0.0e+00 1322.4 1636 52.2
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 0.0e+00 1291.9 1580 53.6
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 0.0e+00 1254.6 1640 50.5
Atru.chr9.2519 Acer truncatum HOM05D004430 ORTHO05D005088 5.4e-295 1018.5 1669 44.4
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 3.5e-294 1015.8 1610 43.5
QL10p008934 Quercus lobata HOM05D004430 ORTHO05D005088 3.4e-289 999.2 1600 45.1
MD06G1170800 Malus domestica HOM05D004430 ORTHO05D005088 1.4e-282 977.2 1611 44.1
Thecc.03G018800 Theobroma cacao HOM05D004430 ORTHO05D005088 1.5e-281 973.8 1593 44.1
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 3.5e-278 962.6 1657 41.8
Prupe.5G170400 Prunus persica HOM05D004430 ORTHO05D005088 1.3e-277 960.7 1686 41.6
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 9.8e-273 944.5 1627 43.1
RcHm_v2.0_Chr7g0193171 Rosa chinensis HOM05D004430 ORTHO05D005088 2.1e-270 936.8 1592 43.5
MD14G1176500 Malus domestica HOM05D004430 ORTHO05D005088 6.8e-266 921.8 1614 42.9
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 6.4e-264 915.2 1614 43.6
TWI39G0976 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 3.2e-263 912.9 1608 42.1
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 4.1e-263 912.5 1617 42.9
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 1.6e-262 910.6 1584 42.0
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 4.6e-262 909.1 1597 41.8
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 4.6e-262 909.1 1614 43.0
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 1.8e-258 897.1 1560 42.8
Duzib084G1065 Durio zibethinus HOM05D004430 ORTHO05D005088 4.4e-257 892.5 1616 42.3
FAN13G0016 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.3e-253 880.9 1599 41.8
FvH4_5g05640 Fragaria vesca HOM05D004430 ORTHO05D005088 1.7e-253 880.6 1600 41.7
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 2.5e-252 876.7 1586 40.9
TWI14G0761 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 1.3e-251 874.4 1588 41.3
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 1.8e-250 870.5 1564 41.6
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 4.4e-249 865.9 1583 41.5
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 1.1e-244 851.3 1620 41.2
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 2.1e-243 847.0 1600 40.7
FAN04G2171 Fragaria x ananassa HOM05D004430 ORTHO05D005088 9.0e-242 841.6 1595 41.0
FAN18G2048 Fragaria x ananassa HOM05D004430 ORTHO05D005088 4.5e-241 839.3 1593 40.7
FAN18G1146 Fragaria x ananassa HOM05D004430 ORTHO05D005088 2.4e-239 833.6 1600 40.7
CANSAT80G0620 Cannabis sativa HOM05D004430 ORTHO05D005088 9.3e-239 831.6 1615 41.7
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 4.6e-238 829.3 1661 39.0
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 9.0e-234 815.1 1667 38.7
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 9.0e-234 815.1 1615 39.3
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 2.7e-230 803.5 1574 40.2
vmacro19413 Vaccinium macrocarpon HOM05D004430 ORTHO05D005088 1.0e-224 785.0 1599 39.1
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.1e-223 781.6 1644 38.7
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 4.6e-214 749.6 1584 38.5
CiPaw.11G023400 Carya illinoinensis HOM05D004430 ORTHO05D005088 1.3e-211 741.5 1499 38.9
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 6.3e-211 739.2 1574 38.3
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 4.1e-210 736.5 1574 38.2
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 5.3e-210 736.1 1603 38.9
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 2.9e-208 730.3 1584 38.0
arahy.Tifrunner.gnm1.ann1.I95HTR Arachis hypogaea HOM05D004430 ORTHO05D005088 1.2e-201 708.4 767 54.6
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 5.9e-201 706.1 1563 38.1
Rhsim08G0174600 Rhododendron simsii HOM05D004430 ORTHO05D005088 1.0e-200 705.3 1593 37.8
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 2.9e-200 703.7 1602 37.0
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 4.2e-199 699.9 1571 37.3
Ciclev10018497m.g Citrus clementina HOM05D004430 ORTHO05D005088 9.4e-199 698.7 1419 38.9
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 2.3e-197 694.1 1577 36.8
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 1.1e-194 685.3 1610 36.9
PGR083G1025 Punica granatum HOM05D004430 ORTHO05D005088 2.2e-192 677.6 1595 37.3
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 1.1e-191 675.2 1614 35.7
Nn3g16781 Nelumbo nucifera HOM05D004430 ORTHO05D005088 6.1e-190 669.5 1669 35.2
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 5.2e-189 666.4 1585 36.8
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 2.8e-187 660.6 1550 36.5
CiPaw.12G028500 Carya illinoinensis HOM05D004430 ORTHO05D005088 6.5e-184 649.4 1340 38.8
Migut.D01964 Erythranthe guttata HOM05D004430 ORTHO05D005088 8.8e-181 639.0 1619 36.4
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 4.4e-180 636.7 1604 34.5
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 7.5e-180 636.0 1632 35.2
Cc04_g12380 Coffea canephora HOM05D004430 ORTHO05D005088 1.1e-178 632.1 1272 37.8
SalBow6G6763 Salvia bowleyana HOM05D004430 ORTHO05D005088 5.9e-177 626.3 1622 36.6
SalBow6G6905 Salvia bowleyana HOM05D004430 ORTHO05D005088 2.9e-176 624.0 1622 36.2
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 1.4e-173 615.1 1571 35.5
Sc04g0001690 Simmondsia chinensis HOM05D004430 ORTHO05D005088 4.4e-172 610.1 1560 35.0
THA.LOC104809778 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 5.4e-170 603.2 1581 36.1
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 1.0e-165 589.0 1594 35.0
MSTRG.4361 Avicennia marina HOM05D004430 ORTHO05D005088 3.1e-165 587.4 1634 36.4
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 8.9e-165 585.9 1606 33.8
ECA232G4503 Erigeron canadensis HOM05D004430 ORTHO05D005088 1.2e-164 585.5 1549 35.7
Actinidia19338 Actinidia chinensis HOM05D004430 ORTHO05D005088 1.6e-158 565.1 1195 38.0
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 1.4e-157 562.0 1568 34.1
MBI19_g24062_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 3.7e-155 553.9 1751 33.5
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 6.0e-153 546.6 1610 34.7
Lsat_1_v5_gn_4_75700 Lactuca sativa HOM05D004430 ORTHO05D005088 5.6e-151 540.0 1142 39.1
AT4G24680 Arabidopsis thaliana HOM05D004430 ORTHO05D005088 3.2e-146 524.2 1567 33.4
Aqoxy3G01105 Aquilegia oxysepala HOM05D004430 ORTHO05D005088 8.6e-144 516.2 1657 32.5
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 1.9e-138 498.4 1540 32.7
PSO017G2086 Papaver somniferum HOM05D004430 ORTHO05D005088 1.3e-136 492.3 1680 31.8
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 1.7e-136 491.9 1550 33.4
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 2.3e-136 491.5 1549 33.3
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 3.9e-136 490.7 1551 32.8
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 6.6e-136 490.0 1561 33.1
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 8.7e-136 489.6 1531 32.5
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 1.9e-135 488.4 1560 33.1
CARHR232060 Cardamine hirsuta HOM05D004430 ORTHO05D005088 2.5e-135 488.0 1573 32.5
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 2.5e-135 488.0 1593 32.0
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 4.3e-135 487.3 1613 31.4
SGA_v2.0_scaffold7G04148 Striga asiatica HOM05D004430 ORTHO05D005088 7.3e-135 486.5 1620 33.9
PSO478G3312 Papaver somniferum HOM05D004430 ORTHO05D005088 1.6e-134 485.3 1679 31.3
PGSC0003DMG402018164 Solanum tuberosum HOM05D004430 ORTHO05D005088 4.4e-132 477.2 1334 33.4
HanXRQChr17g0548691 Helianthus annuus HOM05D004430 ORTHO05D005088 4.9e-131 473.8 1167 36.6
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 2.4e-130 471.5 1580 32.0
BcaC06g32869 Brassica carinata HOM05D004430 ORTHO05D005088 1.1e-125 456.1 1554 32.4
HanXRQChr11g0348291 Helianthus annuus HOM05D004430 ORTHO05D005088 2.6e-124 451.4 679 45.5
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 4.3e-119 434.1 1566 31.0
TAR622G0490 Trochodendron aralioides HOM05D004430 ORTHO05D005088 3.8e-115 421.0 920 37.3
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 4.9e-115 420.6 1553 30.8
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 7.1e-114 416.8 1555 30.1
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 6.7e-112 410.2 1570 30.4
ATR0757G157 Amborella trichopoda HOM05D004430 ORTHO05D005088 2.8e-110 404.8 1659 30.7
Hma1.2p1_0046F.1_g026730 Hydrangea macrophylla HOM05D004430 ORTHO05D005088 3.5e-105 387.9 1193 35.4
unitig_37.g12744 Utricularia gibba HOM05D004430 ORTHO05D005088 7.9e-105 386.7 1546 31.2
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 1.1e-103 382.9 1515 29.5
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 2.2e-102 378.6 1529 29.7
BcaB03g12441 Brassica carinata HOM05D004430 ORTHO05D005088 1.7e-99 369.0 1512 29.1
MBI10_g44386_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 3.1e-93 348.2 1490 30.5
Actinidia19112 Actinidia chinensis HOM05D004430 ORTHO05D005088 1.6e-89 335.9 336 57.4
Actinidia33085 Actinidia chinensis HOM05D004430 ORTHO05D005088 2.2e-67 262.3 685 35.5
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 7.2e-66 257.3 1600 26.8
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 1.0e-64 253.4 1462 27.2
CDE06G0437 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 2.6e-63 248.8 1522 26.2
Psat2g086200 Pisum sativum HOM05D004430 ORTHO05D005088 7.3e-58 230.7 195 68.2
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 1.2e-55 223.4 193 66.3
Psat2g086240 Pisum sativum HOM05D004430 ORTHO05D005088 2.6e-55 222.2 207 63.8
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 9.8e-55 220.3 801 30.1
MBI10_g44384_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 1.7e-54 219.5 211 61.6
Psat2g098600 Pisum sativum HOM05D003093 ORTHO05D005088 1.6e-52 213.0 181 69.1
HPP92_006251 Vanilla planifolia HOM05D004430 ORTHO05D005088 2.3e-51 209.1 1414 27.8
CDE02G0036 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 2.3e-48 199.1 202 54.5
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 3.4e-47 195.3 473 35.1
Actinidia19111 Actinidia chinensis HOM05D004430 ORTHO05D005088 1.6e-41 176.4 479 33.8
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 8.1e-41 174.1 1523 25.9
Psat1g046400 Pisum sativum HOM05D004430 ORTHO05D005088 3.4e-39 168.7 174 60.9
HPP92_006241 Vanilla planifolia HOM05D004430 ORTHO05D005088 5.8e-39 167.9 210 56.2
HPP92_024337 Vanilla planifolia HOM05D004430 ORTHO05D005088 7.5e-39 167.5 1260 26.5
SEGI_40513 Sequoiadendron giganteum HOM05D004430 ORTHO05D005088 5.4e-37 161.4 1646 24.4
Mapoly0057s0099 Marchantia polymorpha HOM05D004430 ORTHO05D005088 1.1e-26 127.1 522 32.2
TAR622G0342 Trochodendron aralioides HOM05D004430 ORTHO05D005088 3.3e-26 125.6 89 73.0
Actinidia33086 Actinidia chinensis HOM05D004430 ORTHO05D005088 5.2e-24 118.2 373 32.4
HPP92_024330 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.7e-19 103.2 1260 24.4
Pp3c4_23740 Physcomitrium patens HOM05D004430 ORTHO05D005088 1.5e-18 100.1 1424 25.3
CBR_g19277 Chara braunii HOM05D004430 ORTHO05D005088 4.3e-18 98.6 525 30.7
Pp3c26_2670 Physcomitrium patens HOM05D004430 ORTHO05D005088 9.6e-18 97.4 239 37.2
AagrBONN_evm.TU.Sc2ySwM_344.4397 Anthoceros agrestis HOM05D004430 ORTHO05D005088 1.3e-17 97.1 830 28.1
SMO174G0145 Selaginella moellendorffii HOM05D004430 ORTHO05D005088 2.6e-15 89.4 805 27.3
Actinidia19337 Actinidia chinensis HOM05D004430 ORTHO05D005088 4.9e-14 85.1 174 37.4
Pp3c4_22960 Physcomitrium patens HOM05D004430 ORTHO05D005088 4.2e-13 82.0 1393 24.6
TAR629G1829 Trochodendron aralioides HOM05D003072 ORTHO05D008464 4.2e-13 82.0 138 40.6
TAR622G0951 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.3e-11 77.0 134 42.5
Psat0s4895g0040 Pisum sativum HOM05D002020 ORTHO05D005088 2.3e-11 76.3 60 66.7
Pp3c26_2830 Physcomitrium patens HOM05D004430 ORTHO05D005088 5.8e-07 61.6 1490 22.8


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